RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
DEPDC1B-205ENST00000512078 CGNL1Q0VF96 1302 aa11.21□□□□□ -0.61
DEPDC1B-205ENST00000512078 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.62
DEPDC1B-205ENST00000512078 NME9Q86XW9 330 aa11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 LTV1Q96GA3 475 aaPredicted RBP11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 SBNO2Q9Y2G9 1366 aa11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.621e-6■□□□□ 9.3
DEPDC1B-205ENST00000512078 NLGN1Q8N2Q7 840 aa11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
DEPDC1B-205ENST00000512078 GNPATO15228 680 aa11.19□□□□□ -0.62
DEPDC1B-205ENST00000512078 CD163L1Q9NR16 1453 aa11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 DLEC1Q9Y238 1755 aa11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 CCDC85CA6NKD9 419 aa11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 HSPA8P11142 646 aaKnown RBP11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1B-205ENST00000512078 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
DEPDC1B-205ENST00000512078 POTECB2RU33 542 aa11.17□□□□□ -0.62
DEPDC1B-205ENST00000512078 TMF1P82094 1093 aa11.17□□□□□ -0.62
DEPDC1B-205ENST00000512078 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 SIK1P57059 783 aa11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 PARP3Q9Y6F1 533 aa11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 VEGFBP49765 207 aa11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 RASSF7Q02833 373 aa11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
DEPDC1B-205ENST00000512078 LMNB1P20700 586 aa11.15□□□□□ -0.62
DEPDC1B-205ENST00000512078 HOXC9P31274 260 aa11.15□□□□□ -0.62
DEPDC1B-205ENST00000512078 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
DEPDC1B-205ENST00000512078 ITPK1Q13572 414 aa11.15□□□□□ -0.62
DEPDC1B-205ENST00000512078 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
DEPDC1B-205ENST00000512078 THSD7BQ9C0I4 1608 aa11.15□□□□□ -0.62
DEPDC1B-205ENST00000512078 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
DEPDC1B-205ENST00000512078 PASKQ96RG2 1323 aa11.14□□□□□ -0.63
DEPDC1B-205ENST00000512078 GYS1P13807 737 aa11.14□□□□□ -0.63
DEPDC1B-205ENST00000512078 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
DEPDC1B-205ENST00000512078 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
DEPDC1B-205ENST00000512078 PIGBQ92521 554 aa11.14□□□□□ -0.63
DEPDC1B-205ENST00000512078 SCN4AP35499 1836 aa11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 CYP27B1O15528 508 aa11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 RTCBQ9Y3I0 505 aaKnown RBP11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 AFDNP55196 1824 aaKnown RBP11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
DEPDC1B-205ENST00000512078 CHRNA5P30532 468 aa11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 ATP6V1AP38606 617 aa11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 KDRP35968 1356 aa11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 RAB3GAP2Q9H2M9 1393 aa11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 FER1L6Q2WGJ9 1857 aa11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
DEPDC1B-205ENST00000512078 TMEM88BA6NKF7 163 aa11.1□□□□□ -0.63
DEPDC1B-205ENST00000512078 AMPHP49418 695 aa11.1□□□□□ -0.63
DEPDC1B-205ENST00000512078 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1B-205ENST00000512078 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
DEPDC1B-205ENST00000512078 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
DEPDC1B-205ENST00000512078 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
DEPDC1B-205ENST00000512078 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
DEPDC1B-205ENST00000512078 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1B-205ENST00000512078 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
DEPDC1B-205ENST00000512078 CASP8AP2Q9UKL3 1982 aa11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 RASSF10A6NK89 507 aa11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 RFC4P35249 363 aa11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 HDGFL2Q7Z4V5 671 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 ASAP1Q9ULH1 1129 aa11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 CNTNAP4Q9C0A0 1308 aa11.08□□□□□ -0.64
DEPDC1B-205ENST00000512078 DDR1Q08345 913 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 A0A1W2PP64 1363 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 LTBP1Q14766 1721 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 ADAMTS7Q9UKP4 1686 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 NFKBIEO00221 500 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 RPS6KA4O75676 772 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 LDHDQ86WU2 507 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
DEPDC1B-205ENST00000512078 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
DEPDC1B-205ENST00000512078 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1B-205ENST00000512078 DEFB115Q30KQ5 88 aa11.05□□□□□ -0.64
DEPDC1B-205ENST00000512078 PRPF38BQ5VTL8 546 aaKnown RBP11.05□□□□□ -0.64
DEPDC1B-205ENST00000512078 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
DEPDC1B-205ENST00000512078 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 FBLN1P23142 703 aa11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 FKBP8Q14318 412 aa11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 COG3Q96JB2 828 aa11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 MCOLN1Q9GZU1 580 aa11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 USP42Q9H9J4 1324 aaKnown RBP11.04□□□□□ -0.64
DEPDC1B-205ENST00000512078 TMC1Q8TDI8 760 aa11.03□□□□□ -0.64
DEPDC1B-205ENST00000512078 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms