RNA–Protein interactions for RNA: ENST00000511725.5

UBE2D2-208, Transcript of ubiquitin conjugating enzyme E2 D2, human

TSL 2 BASIC

Gene UBE2D2, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D2-208	ENST00000511725	RALBP1	Q15311	655 aa		14.03	□□□□□ -0.16
UBE2D2-208	ENST00000511725	AEBP1	Q8IUX7	1158 aa		14.03	□□□□□ -0.16
UBE2D2-208	ENST00000511725	UPF1	Q92900	1129 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
UBE2D2-208	ENST00000511725	IGSF1	Q8N6C5	1336 aa		14.03	□□□□□ -0.16
UBE2D2-208	ENST00000511725	MEGF6	O75095	1541 aa		14.03	□□□□□ -0.16
UBE2D2-208	ENST00000511725	LRRC37A3	O60309	1634 aa		14.03	□□□□□ -0.16
UBE2D2-208	ENST00000511725	DIAPH1	O60610	1272 aa	Known RBP	14.02	□□□□□ -0.17
UBE2D2-208	ENST00000511725	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.02	□□□□□ -0.17
UBE2D2-208	ENST00000511725	RGPD1	P0DJD0	1748 aa		14.01	□□□□□ -0.17
UBE2D2-208	ENST00000511725	SULT6B1	Q6IMI4	303 aa		14	□□□□□ -0.17
UBE2D2-208	ENST00000511725	ZCRB1	Q8TBF4	217 aa	Known RBP	14	□□□□□ -0.17
UBE2D2-208	ENST00000511725	OVOS2	A0A0G2JMS6	1433 aa		13.99	□□□□□ -0.17
UBE2D2-208	ENST00000511725	TAT	P17735	454 aa	Predicted RBP	13.99	□□□□□ -0.17
UBE2D2-208	ENST00000511725	DDX54	Q8TDD1	881 aa	Known RBP	13.99	□□□□□ -0.17
UBE2D2-208	ENST00000511725	RAPGEF4	Q8WZA2	1011 aa		13.99	□□□□□ -0.17
UBE2D2-208	ENST00000511725	TMEM106C	Q9BVX2	250 aa		13.99	□□□□□ -0.17
UBE2D2-208	ENST00000511725	KAT6B	Q8WYB5	2073 aa		13.99	□□□□□ -0.17
UBE2D2-208	ENST00000511725	SHANK3	Q9BYB0	1731 aa		13.98	□□□□□ -0.17
UBE2D2-208	ENST00000511725	FAM196A	Q6ZSG2	479 aa		13.98	□□□□□ -0.17
UBE2D2-208	ENST00000511725	PTF1A	Q7RTS3	328 aa		13.98	□□□□□ -0.17
UBE2D2-208	ENST00000511725	TNS2	Q63HR2	1409 aa		13.98	□□□□□ -0.17
UBE2D2-208	ENST00000511725	KDR	P35968	1356 aa		13.97	□□□□□ -0.17
UBE2D2-208	ENST00000511725	PPP1R37	O75864	691 aa		13.97	□□□□□ -0.17
UBE2D2-208	ENST00000511725	HMOX1	P09601	288 aa		13.97	□□□□□ -0.17
UBE2D2-208	ENST00000511725	MS4A3	Q96HJ5	214 aa		13.97	□□□□□ -0.17
UBE2D2-208	ENST00000511725	SBF2	Q86WG5	1849 aa		13.97	□□□□□ -0.17
UBE2D2-208	ENST00000511725	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.96	□□□□□ -0.17
UBE2D2-208	ENST00000511725	CYP27B1	O15528	508 aa		13.96	□□□□□ -0.17
UBE2D2-208	ENST00000511725	CFAP53	Q96M91	514 aa		13.96	□□□□□ -0.17
UBE2D2-208	ENST00000511725	U2SURP	O15042	1029 aa	Known RBP	13.95	□□□□□ -0.18
UBE2D2-208	ENST00000511725	KCNQ2	O43526	872 aa		13.95	□□□□□ -0.18
UBE2D2-208	ENST00000511725	TRIM37	O94972	964 aa		13.95	□□□□□ -0.18
UBE2D2-208	ENST00000511725	BCL9	O00512	1426 aa		13.94	□□□□□ -0.18
UBE2D2-208	ENST00000511725	MKRN3	Q13064	507 aa	Known RBP	13.94	□□□□□ -0.18
UBE2D2-208	ENST00000511725	CCDC184	Q52MB2	194 aa		13.94	□□□□□ -0.18
UBE2D2-208	ENST00000511725	PKD1L3	Q7Z443	1732 aa		13.94	□□□□□ -0.18
UBE2D2-208	ENST00000511725	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	9e-6	■□□□□ 9.4
UBE2D2-208	ENST00000511725	SPG7	Q9UQ90	795 aa		13.93	□□□□□ -0.18
UBE2D2-208	ENST00000511725	CCDC125	Q86Z20	511 aa		13.92	□□□□□ -0.18
UBE2D2-208	ENST00000511725	ACSBG1	Q96GR2	724 aa		13.92	□□□□□ -0.18
UBE2D2-208	ENST00000511725	PHACTR3	Q96KR7	559 aa		13.92	□□□□□ -0.18
UBE2D2-208	ENST00000511725	RSPH6A	Q9H0K4	717 aa		13.92	□□□□□ -0.18
UBE2D2-208	ENST00000511725	SRCAP	Q6ZRS2	3230 aa		13.92	□□□□□ -0.18
UBE2D2-208	ENST00000511725	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE2D2-208	ENST00000511725	PHKG2	P15735	406 aa		13.91	□□□□□ -0.18
UBE2D2-208	ENST00000511725	TIE1	P35590	1138 aa		13.91	□□□□□ -0.18
UBE2D2-208	ENST00000511725	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.91	□□□□□ -0.18	1e-6	■□□□□ 10.2
UBE2D2-208	ENST00000511725	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE2D2-208	ENST00000511725	DEFB132	Q7Z7B7	95 aa		13.91	□□□□□ -0.18
UBE2D2-208	ENST00000511725	NUDC	Q9Y266	331 aa		13.91	□□□□□ -0.18
UBE2D2-208	ENST00000511725	PCDH11X	Q9BZA7	1347 aa		13.9	□□□□□ -0.18
UBE2D2-208	ENST00000511725	PCDH11Y	Q9BZA8	1340 aa		13.9	□□□□□ -0.18
UBE2D2-208	ENST00000511725	MTHFSD	Q2M296	383 aa	Known RBP	13.9	□□□□□ -0.18
UBE2D2-208	ENST00000511725	TNS1	Q9HBL0	1735 aa	Known RBP	13.9	□□□□□ -0.18
UBE2D2-208	ENST00000511725	ANP32C	O43423	234 aa		13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	FCHSD2	O94868	740 aa		13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	PRIM1	P49642	420 aa	Known RBP	13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	AMOT	Q4VCS5	1084 aa		13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	IFNL2	Q8IZJ0	200 aa		13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	KCNV2	Q8TDN2	545 aa		13.89	□□□□□ -0.19
UBE2D2-208	ENST00000511725	PLEKHG2	Q9H7P9	1386 aa		13.88	□□□□□ -0.19
UBE2D2-208	ENST00000511725	APBA3	O96018	575 aa		13.88	□□□□□ -0.19
UBE2D2-208	ENST00000511725	PRKAR2B	P31323	418 aa		13.88	□□□□□ -0.19
UBE2D2-208	ENST00000511725	EN1	Q05925	392 aa	Predicted RBP	13.87	□□□□□ -0.19
UBE2D2-208	ENST00000511725	MS4A4A	Q96JQ5	239 aa		13.87	□□□□□ -0.19
UBE2D2-208	ENST00000511725	CAMKK2	Q96RR4	588 aa		13.87	□□□□□ -0.19
UBE2D2-208	ENST00000511725	PLEKHF1	Q96S99	279 aa		13.87	□□□□□ -0.19
UBE2D2-208	ENST00000511725	TRPC6	Q9Y210	931 aa		13.87	□□□□□ -0.19
UBE2D2-208	ENST00000511725	TOGARAM1	Q9Y4F4	1720 aa		13.87	□□□□□ -0.19
UBE2D2-208	ENST00000511725	NHS	Q6T4R5	1651 aa		13.86	□□□□□ -0.19
UBE2D2-208	ENST00000511725	ITGB4	P16144	1822 aa		13.86	□□□□□ -0.19
UBE2D2-208	ENST00000511725	CLCN6	P51797	869 aa		13.86	□□□□□ -0.19
UBE2D2-208	ENST00000511725	LGR6	Q9HBX8	967 aa		13.86	□□□□□ -0.19
UBE2D2-208	ENST00000511725	ADAMTS8	Q9UP79	889 aa		13.86	□□□□□ -0.19
UBE2D2-208	ENST00000511725	DOT1L	Q8TEK3	1739 aa		13.86	□□□□□ -0.19
UBE2D2-208	ENST00000511725	SF3B2	Q13435	895 aa	Known RBP	13.85	□□□□□ -0.19
UBE2D2-208	ENST00000511725	MPRIP	Q6WCQ1	1025 aa		13.85	□□□□□ -0.19
UBE2D2-208	ENST00000511725	BTAF1	O14981	1849 aa		13.85	□□□□□ -0.19
UBE2D2-208	ENST00000511725	KDM6A	O15550	1401 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	PLSCR1	O15162	318 aa		13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	EZH2	Q15910	746 aa	Known RBP	13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	AKAP4	Q5JQC9	854 aa		13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	PIGB	Q92521	554 aa		13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	SYTL4	Q96C24	671 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	DCAF5	Q96JK2	942 aa		13.84	□□□□□ -0.19
UBE2D2-208	ENST00000511725	TTLL13P	A6NNM8	815 aa		13.83	□□□□□ -0.2
UBE2D2-208	ENST00000511725	PDE4A	P27815	886 aa		13.83	□□□□□ -0.2
UBE2D2-208	ENST00000511725	BAG6	P46379	1132 aa		13.83	□□□□□ -0.2
UBE2D2-208	ENST00000511725	E2F4	Q16254	413 aa		13.83	□□□□□ -0.2
UBE2D2-208	ENST00000511725	C1orf141	Q5JVX7	400 aa		13.83	□□□□□ -0.2
UBE2D2-208	ENST00000511725	VIRMA	Q69YN4	1812 aa	Known RBP	13.83	□□□□□ -0.2
UBE2D2-208	ENST00000511725	ERVV-2	B6SEH9	535 aa		13.82	□□□□□ -0.2
UBE2D2-208	ENST00000511725	IL17RE	Q8NFR9	667 aa		13.82	□□□□□ -0.2
UBE2D2-208	ENST00000511725	PNISR	Q8TF01	805 aa	Known RBP	13.82	□□□□□ -0.2
UBE2D2-208	ENST00000511725	SCN11A	Q9UI33	1791 aa		13.81	□□□□□ -0.2
UBE2D2-208	ENST00000511725	HAX1	O00165	279 aa		13.81	□□□□□ -0.2
UBE2D2-208	ENST00000511725	RNMT	O43148	476 aa	Known RBP	13.81	□□□□□ -0.2
UBE2D2-208	ENST00000511725	HSP90AB1	P08238	724 aa	Known RBP	13.81	□□□□□ -0.2
UBE2D2-208	ENST00000511725	CCDC146	Q8IYE0	955 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms