RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 MTHFSP49914 203 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 KCNQ4P56696 695 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 AEBP1Q8IUX7 1158 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 PIGBQ92521 554 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 WDR90Q96KV7 1748 aa18.35■□□□□ 0.53
CLDND1-224ENST00000511667 MSL1Q68DK7 614 aa18.34■□□□□ 0.53
CLDND1-224ENST00000511667 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
CLDND1-224ENST00000511667 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
CLDND1-224ENST00000511667 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-224ENST00000511667 C5P01031 1676 aa18.32■□□□□ 0.52
CLDND1-224ENST00000511667 SLC34A2O95436 690 aa18.32■□□□□ 0.52
CLDND1-224ENST00000511667 AMOTQ4VCS5 1084 aa18.32■□□□□ 0.52
CLDND1-224ENST00000511667 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
CLDND1-224ENST00000511667 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-224ENST00000511667 ZNF831Q5JPB2 1677 aa18.31■□□□□ 0.52
CLDND1-224ENST00000511667 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-224ENST00000511667 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
CLDND1-224ENST00000511667 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-224ENST00000511667 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
CLDND1-224ENST00000511667 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
CLDND1-224ENST00000511667 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
CLDND1-224ENST00000511667 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
CLDND1-224ENST00000511667 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
CLDND1-224ENST00000511667 HMGB2P26583 209 aaKnown RBP18.28■□□□□ 0.52
CLDND1-224ENST00000511667 C4BP0C0L5 1744 aa18.27■□□□□ 0.52
CLDND1-224ENST00000511667 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
CLDND1-224ENST00000511667 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
CLDND1-224ENST00000511667 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
CLDND1-224ENST00000511667 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
CLDND1-224ENST00000511667 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
CLDND1-224ENST00000511667 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
CLDND1-224ENST00000511667 ASAP1Q9ULH1 1129 aa18.26■□□□□ 0.51
CLDND1-224ENST00000511667 SCN11AQ9UI33 1791 aa18.26■□□□□ 0.51
CLDND1-224ENST00000511667 UBR3Q6ZT12 1888 aa18.26■□□□□ 0.51
CLDND1-224ENST00000511667 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-224ENST00000511667 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
CLDND1-224ENST00000511667 LOC102724428A0A0B4J2F2 783 aa18.24■□□□□ 0.51
CLDND1-224ENST00000511667 SIK1P57059 783 aa18.24■□□□□ 0.51
CLDND1-224ENST00000511667 HTRA3P83110 453 aa18.24■□□□□ 0.51
CLDND1-224ENST00000511667 SLC4A9Q96Q91 983 aa18.24■□□□□ 0.51
CLDND1-224ENST00000511667 MRC1P22897 1456 aa18.24■□□□□ 0.51
CLDND1-224ENST00000511667 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
CLDND1-224ENST00000511667 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
CLDND1-224ENST00000511667 NMRK2Q9NPI5 230 aa18.23■□□□□ 0.51
CLDND1-224ENST00000511667 PCNTO95613 3336 aa18.23■□□□□ 0.51
CLDND1-224ENST00000511667 FSTL1Q12841 308 aa18.22■□□□□ 0.51
CLDND1-224ENST00000511667 ITPK1Q13572 414 aa18.22■□□□□ 0.51
CLDND1-224ENST00000511667 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
CLDND1-224ENST00000511667 COL5A3P25940 1745 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-224ENST00000511667 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
CLDND1-224ENST00000511667 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
CLDND1-224ENST00000511667 HMOX1P09601 288 aa18.19■□□□□ 0.5
CLDND1-224ENST00000511667 MTHFSDQ2M296 383 aaKnown RBP18.19■□□□□ 0.5
CLDND1-224ENST00000511667 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
CLDND1-224ENST00000511667 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
CLDND1-224ENST00000511667 SSFA2P28290 1259 aa18.17■□□□□ 0.5
CLDND1-224ENST00000511667 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
CLDND1-224ENST00000511667 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
CLDND1-224ENST00000511667 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
CLDND1-224ENST00000511667 CABP4P57796 275 aa18.16■□□□□ 0.5
CLDND1-224ENST00000511667 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
CLDND1-224ENST00000511667 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
CLDND1-224ENST00000511667 LGR6Q9HBX8 967 aa18.16■□□□□ 0.5
CLDND1-224ENST00000511667 RNMTO43148 476 aaKnown RBP18.15■□□□□ 0.5
CLDND1-224ENST00000511667 HSPA1AP0DMV8 641 aaKnown RBP18.15■□□□□ 0.5
CLDND1-224ENST00000511667 HSPA1BP0DMV9 641 aaKnown RBP18.15■□□□□ 0.5
CLDND1-224ENST00000511667 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
CLDND1-224ENST00000511667 PCDH10Q9P2E7 1040 aa18.15■□□□□ 0.5
CLDND1-224ENST00000511667 TJP1Q07157 1748 aa18.15■□□□□ 0.5
CLDND1-224ENST00000511667 AK7Q96M32 723 aa18.14■□□□□ 0.49
CLDND1-224ENST00000511667 CNTNAP4Q9C0A0 1308 aa18.14■□□□□ 0.49
CLDND1-224ENST00000511667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
CLDND1-224ENST00000511667 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
CLDND1-224ENST00000511667 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
CLDND1-224ENST00000511667 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
CLDND1-224ENST00000511667 CEMIPQ8WUJ3 1361 aa18.12■□□□□ 0.49
CLDND1-224ENST00000511667 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
CLDND1-224ENST00000511667 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
CLDND1-224ENST00000511667 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
CLDND1-224ENST00000511667 CFAP53Q96M91 514 aa18.11■□□□□ 0.49
CLDND1-224ENST00000511667 BCS1LQ9Y276 419 aa18.11■□□□□ 0.49
CLDND1-224ENST00000511667 KDM2BQ8NHM5 1336 aa18.1■□□□□ 0.49
CLDND1-224ENST00000511667 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
CLDND1-224ENST00000511667 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
CLDND1-224ENST00000511667 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
CLDND1-224ENST00000511667 C10orf71Q711Q0 1435 aa18.09■□□□□ 0.49
CLDND1-224ENST00000511667 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
CLDND1-224ENST00000511667 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
CLDND1-224ENST00000511667 FCHSD2O94868 740 aa18.09■□□□□ 0.49
CLDND1-224ENST00000511667 ADRA2BP18089 450 aa18.09■□□□□ 0.49
CLDND1-224ENST00000511667 GNPATO15228 680 aa18.08■□□□□ 0.48
CLDND1-224ENST00000511667 PHF14O94880 888 aa18.08■□□□□ 0.48
CLDND1-224ENST00000511667 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
CLDND1-224ENST00000511667 SMC1BQ8NDV3 1235 aa18.08■□□□□ 0.48
CLDND1-224ENST00000511667 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
CLDND1-224ENST00000511667 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
CLDND1-224ENST00000511667 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
CLDND1-224ENST00000511667 TGFB2P61812 414 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms