RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	WASL	O00401	505 aa	Predicted RBP	5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	GDF9	O60383	454 aa		5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ZIC2	O95409	532 aa	Predicted RBP	5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ABL1	P00519	1130 aa		5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	FKBP5	Q13451	457 aa	Predicted RBP	5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CCDC27	Q2M243	656 aa		5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CHMP7	Q8WUX9	453 aa	Predicted RBP	5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SCG3	Q8WXD2	468 aa	Known RBP	5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ITPKC	Q96DU7	683 aa		5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ZFAND3	Q9H8U3	227 aa		5.44	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SOWAHD	A6NJG2	315 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	IL2RA	P01589	272 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ADH1A	P07327	375 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	WDR4	P57081	412 aa	Known RBP	5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TBCEL	Q5QJ74	424 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CAPN12	Q6ZSI9	719 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	RGS22	Q8NE09	1264 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	AGBL1	Q96MI9	1066 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SLC4A9	Q96Q91	983 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ANO2	Q9NQ90	1003 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SEPT3	Q9UH03	358 aa		5.43	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ATAD2	Q6PL18	1390 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784		A0A1W2PRU2	124 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784		A6NJY4	79 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	C21orf2	O43822	256 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	IGFBP4	P22692	258 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SMTN	P53814	917 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	EPHA4	P54764	986 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ZNF211	Q13398	564 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	NAA30	Q147X3	362 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	NPM2	Q86SE8	214 aa	Known RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	KDF1	Q8NAX2	398 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CNKSR1	Q969H4	720 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	XAGE2	Q96GT9	111 aa		5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	KLF16	Q9BXK1	252 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SCHIP1	Q9P0W5	487 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	BIN2	Q9UBW5	565 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	MEN1	O00255	615 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	FOXO3	O43524	673 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	PPP1R12B	O60237	982 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SMPD1	P17405	629 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	PTGIR	P43119	386 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	RELB	Q01201	579 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TLR1	Q15399	786 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	FOXD4L5	Q5VV16	416 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784		Q6ZVU0	165 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SLC9A9	Q8IVB4	645 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	GTF3C2	Q8WUA4	911 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	VTI1A	Q96AJ9	217 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ESYT1	Q9BSJ8	1104 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TOR4A	Q9NXH8	423 aa		5.41	□□□□□ -1.54
CALCOCO2-216	ENST00000509784		H3BRB1	525 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	PTCD1	O75127	700 aa	Known RBP	5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TIMP2	P16035	220 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	FOXK2	Q01167	660 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CLN3	Q13286	438 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	MTMR3	Q13615	1198 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TRIM67	Q6ZTA4	783 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	HPS1	Q92902	700 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	NLRP3	Q96P20	1036 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TUT1	Q9H6E5	874 aa	Known RBP	5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	USP3	Q9Y6I4	520 aa		5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	5.4	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CDK2AP1	O14519	115 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	CENPC	Q03188	943 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	MTFR1	Q15390	333 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	GLYCTK	Q8IVS8	523 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	COL26A1	Q96A83	441 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	EGFL7	Q9UHF1	273 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	HRH3	Q9Y5N1	445 aa		5.39	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	ICMT	O60725	284 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PRR20E	P86478	221 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PRR20C	P86479	221 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PRR20D	P86480	221 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PRR20B	P86481	221 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PRR20A	P86496	221 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	FKBP4	Q02790	459 aa	Known RBP eCLIP	5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	CHMP3	Q9Y3E7	222 aa		5.38	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	MARS	P56192	900 aa	Known RBP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PSMA6	P60900	246 aa	Known RBP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	TMEM214	Q6NUQ4	689 aa	Known RBP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	MEIOB	Q8N635	442 aa		5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	NGLY1	Q96IV0	654 aa		5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	C2orf49	Q9BVC5	232 aa	Predicted RBP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	FHDC1	Q9C0D6	1143 aa	Predicted RBP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	SAP130	Q9H0E3	1048 aa		5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	CABP1	Q9NZU7	370 aa		5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	ZNF232	Q9UNY5	417 aa		5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	PARP3	Q9Y6F1	533 aa		5.37	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	SERTM1	A2A2V5	107 aa		5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	CAPN5	O15484	640 aa	Predicted RBP	5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	GTF2E1	P29083	439 aa	Predicted RBP	5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	SF3B2	Q13435	895 aa	Known RBP	5.36	□□□□□ -1.55
CALCOCO2-216	ENST00000509784	SLC27A3	Q5K4L6	730 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms