RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 NFE2L2Q16236 605 aa19.82■□□□□ 0.76
RNF4-210ENST00000508235 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
RNF4-210ENST00000508235 ATG3Q9NT62 314 aa19.82■□□□□ 0.76
RNF4-210ENST00000508235 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
RNF4-210ENST00000508235 IL17REQ8NFR9 667 aa19.81■□□□□ 0.76
RNF4-210ENST00000508235 CEMIPQ8WUJ3 1361 aa19.81■□□□□ 0.76
RNF4-210ENST00000508235 STK32BQ9NY57 414 aa19.8■□□□□ 0.76
RNF4-210ENST00000508235 ZNF831Q5JPB2 1677 aa19.8■□□□□ 0.76
RNF4-210ENST00000508235 SIPA1L3O60292 1781 aaPredicted RBP19.8■□□□□ 0.76
RNF4-210ENST00000508235 PAPPAQ13219 1627 aa19.8■□□□□ 0.76
RNF4-210ENST00000508235 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 C5P01031 1676 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 LOC102724428A0A0B4J2F2 783 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 SIK1P57059 783 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 LMOD3Q0VAK6 560 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 CCDC184Q52MB2 194 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
RNF4-210ENST00000508235 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
RNF4-210ENST00000508235 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
RNF4-210ENST00000508235 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
RNF4-210ENST00000508235 RIPK4P57078 832 aa19.76■□□□□ 0.75
RNF4-210ENST00000508235 R3HDM1Q15032 1099 aaKnown RBP19.76■□□□□ 0.75
RNF4-210ENST00000508235 MCM10Q7L590 875 aa19.76■□□□□ 0.75
RNF4-210ENST00000508235 RBM42Q9BTD8 480 aaKnown RBP19.76■□□□□ 0.75
RNF4-210ENST00000508235 ATP6V1AP38606 617 aa19.75■□□□□ 0.75
RNF4-210ENST00000508235 SLC15A2Q16348 729 aa19.75■□□□□ 0.75
RNF4-210ENST00000508235 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
RNF4-210ENST00000508235 TTC5Q8N0Z6 440 aa19.75■□□□□ 0.75
RNF4-210ENST00000508235 KCNQ4P56696 695 aa19.74■□□□□ 0.75
RNF4-210ENST00000508235 ANO8Q9HCE9 1232 aaPredicted RBP19.74■□□□□ 0.75
RNF4-210ENST00000508235 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
RNF4-210ENST00000508235 UBR2Q8IWV8 1755 aa19.73■□□□□ 0.75
RNF4-210ENST00000508235 PSDA5PKW4 1024 aaPredicted RBP19.73■□□□□ 0.75
RNF4-210ENST00000508235 DCTN1Q14203 1278 aa19.73■□□□□ 0.75
RNF4-210ENST00000508235 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
RNF4-210ENST00000508235 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
RNF4-210ENST00000508235 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
RNF4-210ENST00000508235 PTCD1O75127 700 aaKnown RBP19.72■□□□□ 0.75
RNF4-210ENST00000508235 SLC39A6Q13433 755 aa19.72■□□□□ 0.75
RNF4-210ENST00000508235 AKT1S1Q96B36 256 aa19.72■□□□□ 0.75
RNF4-210ENST00000508235 TAF7Q15545 349 aaPredicted RBP19.71■□□□□ 0.75
RNF4-210ENST00000508235 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
RNF4-210ENST00000508235 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
RNF4-210ENST00000508235 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
RNF4-210ENST00000508235 ZNF827Q17R98 1081 aa19.7■□□□□ 0.74
RNF4-210ENST00000508235 TFCP2L1Q9NZI6 479 aa19.7■□□□□ 0.74
RNF4-210ENST00000508235 COL5A3P25940 1745 aaPredicted RBP19.7■□□□□ 0.74
RNF4-210ENST00000508235 KCPQ6ZWJ8 1503 aa19.7■□□□□ 0.74
RNF4-210ENST00000508235 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
RNF4-210ENST00000508235 AK7Q96M32 723 aa19.69■□□□□ 0.74
RNF4-210ENST00000508235 RRP7AQ9Y3A4 280 aaKnown RBP19.69■□□□□ 0.74
RNF4-210ENST00000508235 TUBGCP6Q96RT7 1819 aa19.68■□□□□ 0.74
RNF4-210ENST00000508235 APAF1O14727 1248 aa19.68■□□□□ 0.74
RNF4-210ENST00000508235 ITPK1Q13572 414 aa19.68■□□□□ 0.74
RNF4-210ENST00000508235 LINC00116Q8NCU8 138 aa19.68■□□□□ 0.74
RNF4-210ENST00000508235 TJP1Q07157 1748 aa19.68■□□□□ 0.74
RNF4-210ENST00000508235 FLAD1Q8NFF5 587 aa19.67■□□□□ 0.74
RNF4-210ENST00000508235 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
RNF4-210ENST00000508235 SLC4A9Q96Q91 983 aa19.67■□□□□ 0.74
RNF4-210ENST00000508235 CASZ1Q86V15 1759 aa19.67■□□□□ 0.74
RNF4-210ENST00000508235 RC3H1Q5TC82 1133 aaKnown RBP19.66■□□□□ 0.74
RNF4-210ENST00000508235 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
RNF4-210ENST00000508235 THUMPD2Q9BTF0 503 aaKnown RBP19.66■□□□□ 0.74
RNF4-210ENST00000508235 TEX13AQ9BXU3 409 aaPredicted RBP19.66■□□□□ 0.74
RNF4-210ENST00000508235 BABAM1Q9NWV8 329 aa19.66■□□□□ 0.74
RNF4-210ENST00000508235 CNTNAP4Q9C0A0 1308 aa19.66■□□□□ 0.74
RNF4-210ENST00000508235 KDM3BQ7LBC6 1761 aa19.65■□□□□ 0.74
RNF4-210ENST00000508235 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
RNF4-210ENST00000508235 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
RNF4-210ENST00000508235 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
RNF4-210ENST00000508235 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
RNF4-210ENST00000508235 CALD1Q05682 793 aaKnown RBP19.64■□□□□ 0.73
RNF4-210ENST00000508235 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
RNF4-210ENST00000508235 PNPLA7Q6ZV29 1317 aa19.63■□□□□ 0.73
RNF4-210ENST00000508235 GNPATO15228 680 aa19.62■□□□□ 0.73
RNF4-210ENST00000508235 STARD3NLO95772 234 aa19.62■□□□□ 0.73
RNF4-210ENST00000508235 SSFA2P28290 1259 aa19.62■□□□□ 0.73
RNF4-210ENST00000508235 DNAJC10Q8IXB1 793 aa19.62■□□□□ 0.73
RNF4-210ENST00000508235 SLC16A10Q8TF71 515 aa19.62■□□□□ 0.73
RNF4-210ENST00000508235 RTCBQ9Y3I0 505 aaKnown RBP19.62■□□□□ 0.73
RNF4-210ENST00000508235 KCNQ3O43525 872 aa19.61■□□□□ 0.73
RNF4-210ENST00000508235 SNRPA1P09661 255 aaKnown RBP19.61■□□□□ 0.73
RNF4-210ENST00000508235 CRKLP46109 303 aaKnown RBP19.61■□□□□ 0.73
RNF4-210ENST00000508235 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
RNF4-210ENST00000508235 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
RNF4-210ENST00000508235 LRP5O75197 1615 aa19.61■□□□□ 0.73
RNF4-210ENST00000508235 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
RNF4-210ENST00000508235 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
RNF4-210ENST00000508235 ADRA2BP18089 450 aa19.6■□□□□ 0.73
RNF4-210ENST00000508235 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
RNF4-210ENST00000508235 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
RNF4-210ENST00000508235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.59■□□□□ 0.73
RNF4-210ENST00000508235 MSH5O43196 834 aa19.59■□□□□ 0.73
RNF4-210ENST00000508235 RPS6KA4O75676 772 aa19.59■□□□□ 0.73
RNF4-210ENST00000508235 MTFR1LQ9H019 292 aa19.59■□□□□ 0.73
RNF4-210ENST00000508235 SPON1Q9HCB6 807 aa19.59■□□□□ 0.73
RNF4-210ENST00000508235 CCDC87Q9NVE4 849 aa19.59■□□□□ 0.73
RNF4-210ENST00000508235 PHF14O94880 888 aa19.58■□□□□ 0.72
RNF4-210ENST00000508235 COL23A1Q86Y22 540 aaPredicted RBP19.58■□□□□ 0.72
RNF4-210ENST00000508235 PDGFDQ9GZP0 370 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms