RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
SCLT1-208ENST00000506368 MCCP23508 829 aa19.24■□□□□ 0.67
SCLT1-208ENST00000506368 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
SCLT1-208ENST00000506368 RNF214Q8ND24 703 aa19.24■□□□□ 0.67
SCLT1-208ENST00000506368 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
SCLT1-208ENST00000506368 SDSP20132 328 aa19.24■□□□□ 0.67
SCLT1-208ENST00000506368 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
SCLT1-208ENST00000506368 XRN1Q8IZH2 1706 aaKnown RBP19.23■□□□□ 0.67
SCLT1-208ENST00000506368 SYCP1Q15431 976 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 NFE2L2Q16236 605 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 OSBPL3Q9H4L5 887 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 SSH2Q76I76 1423 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 TMX3Q96JJ7 454 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
SCLT1-208ENST00000506368 NSFL1CQ9UNZ2 370 aaKnown RBP19.23■□□□□ 0.67
SCLT1-208ENST00000506368 KIF20BQ96Q89 1820 aa19.22■□□□□ 0.67
SCLT1-208ENST00000506368 CCDC183Q5T5S1 534 aa19.22■□□□□ 0.67
SCLT1-208ENST00000506368 ROBO2Q9HCK4 1378 aa19.22■□□□□ 0.67
SCLT1-208ENST00000506368 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
SCLT1-208ENST00000506368 SAFB2Q14151 953 aaKnown RBP eCLIP19.21■□□□□ 0.671e-6■■■■□ 20
SCLT1-208ENST00000506368 PPP4R3BQ5MIZ7 849 aa19.21■□□□□ 0.67
SCLT1-208ENST00000506368 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
SCLT1-208ENST00000506368 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
SCLT1-208ENST00000506368 NWD1Q149M9 1564 aa19.21■□□□□ 0.67
SCLT1-208ENST00000506368 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
SCLT1-208ENST00000506368 CPSF1Q10570 1443 aaKnown RBP19.2■□□□□ 0.66
SCLT1-208ENST00000506368 ANKRD7Q92527 254 aa19.2■□□□□ 0.66
SCLT1-208ENST00000506368 RTL1A6NKG5 1358 aa19.2■□□□□ 0.66
SCLT1-208ENST00000506368 GOLGA6L6A8MZA4 724 aa19.2■□□□□ 0.66
SCLT1-208ENST00000506368 TWISTNBQ3B726 338 aaPredicted RBP19.19■□□□□ 0.66
SCLT1-208ENST00000506368 BCL2L12Q9HB09 334 aa19.19■□□□□ 0.66
SCLT1-208ENST00000506368 USP25Q9UHP3 1055 aa19.19■□□□□ 0.66
SCLT1-208ENST00000506368 LTBP4Q8N2S1 1624 aa19.19■□□□□ 0.66
SCLT1-208ENST00000506368 FYB1O15117 783 aa19.18■□□□□ 0.66
SCLT1-208ENST00000506368 CTIFO43310 598 aaKnown RBP19.18■□□□□ 0.66
SCLT1-208ENST00000506368 ADCY5O95622 1261 aa19.18■□□□□ 0.66
SCLT1-208ENST00000506368 NEK4P51957 841 aa19.18■□□□□ 0.66
SCLT1-208ENST00000506368 FGD1P98174 961 aa19.18■□□□□ 0.66
SCLT1-208ENST00000506368 RGS12O14924 1447 aa19.18■□□□□ 0.66
SCLT1-208ENST00000506368 XIRP1Q702N8 1843 aaKnown RBP19.18■□□□□ 0.66
SCLT1-208ENST00000506368 HMMRO75330 724 aa19.17■□□□□ 0.66
SCLT1-208ENST00000506368 MX1P20591 662 aa19.17■□□□□ 0.66
SCLT1-208ENST00000506368 CBX1P83916 185 aa19.17■□□□□ 0.66
SCLT1-208ENST00000506368 PROSER2Q86WR7 435 aaPredicted RBP19.17■□□□□ 0.66
SCLT1-208ENST00000506368 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
SCLT1-208ENST00000506368 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
SCLT1-208ENST00000506368 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
SCLT1-208ENST00000506368 KDM4AO75164 1064 aa19.16■□□□□ 0.66
SCLT1-208ENST00000506368 ARID3AQ99856 593 aa19.16■□□□□ 0.66
SCLT1-208ENST00000506368 GABPB1Q06547 395 aaPredicted RBP19.15■□□□□ 0.66
SCLT1-208ENST00000506368 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 CPS1P31327 1500 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 TECPR2O15040 1411 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
SCLT1-208ENST00000506368 CABP2Q9NPB3 220 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 OGFRQ9NZT2 677 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 ATP6V1DQ9Y5K8 247 aa19.15■□□□□ 0.66
SCLT1-208ENST00000506368 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
SCLT1-208ENST00000506368 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
SCLT1-208ENST00000506368 PTPRCP08575 1304 aa19.14■□□□□ 0.65
SCLT1-208ENST00000506368 TMEM94Q12767 1356 aa19.14■□□□□ 0.65
SCLT1-208ENST00000506368 UBE2HP62256 183 aa19.13■□□□□ 0.65
SCLT1-208ENST00000506368 ATP2B3Q16720 1220 aa19.13■□□□□ 0.65
SCLT1-208ENST00000506368 TSPYL6Q8N831 410 aa19.13■□□□□ 0.65
SCLT1-208ENST00000506368 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.12■□□□□ 0.65
SCLT1-208ENST00000506368 FAM193AP78312 1265 aa19.12■□□□□ 0.65
SCLT1-208ENST00000506368 USP48Q86UV5 1035 aa19.12■□□□□ 0.65
SCLT1-208ENST00000506368 PLEKHG5O94827 1062 aa19.12■□□□□ 0.65
SCLT1-208ENST00000506368 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
SCLT1-208ENST00000506368 C16orf71Q8IYS4 520 aaPredicted RBP19.11■□□□□ 0.65
SCLT1-208ENST00000506368 TTC12Q9H892 705 aaPredicted RBP19.11■□□□□ 0.65
SCLT1-208ENST00000506368 TUBGCP6Q96RT7 1819 aa19.11■□□□□ 0.65
SCLT1-208ENST00000506368 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
SCLT1-208ENST00000506368 RPAP1Q9BWH6 1393 aaPredicted RBP19.1■□□□□ 0.65
SCLT1-208ENST00000506368 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
SCLT1-208ENST00000506368 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
SCLT1-208ENST00000506368 SRPK2P78362 688 aaKnown RBP19.1■□□□□ 0.65
SCLT1-208ENST00000506368 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
SCLT1-208ENST00000506368 ESYT1Q9BSJ8 1104 aa19.1■□□□□ 0.65
SCLT1-208ENST00000506368 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
SCLT1-208ENST00000506368 RIOK3O14730 519 aaKnown RBP19.09■□□□□ 0.65
SCLT1-208ENST00000506368 PDIA4P13667 645 aaKnown RBP19.09■□□□□ 0.65
SCLT1-208ENST00000506368 PDE1AP54750 535 aa19.09■□□□□ 0.65
SCLT1-208ENST00000506368 CGNQ9P2M7 1197 aaKnown RBP19.08■□□□□ 0.64
SCLT1-208ENST00000506368 KIAA0232Q92628 1395 aa19.08■□□□□ 0.64
SCLT1-208ENST00000506368 CREBRFQ8IUR6 639 aa19.07■□□□□ 0.64
SCLT1-208ENST00000506368 FUCA2Q9BTY2 467 aa19.07■□□□□ 0.64
SCLT1-208ENST00000506368 ATP7BP35670 1465 aa19.07■□□□□ 0.64
SCLT1-208ENST00000506368 ZNF830Q96NB3 372 aaPredicted RBP19.07■□□□□ 0.64
SCLT1-208ENST00000506368 SRCIN1Q9C0H9 1055 aa19.07■□□□□ 0.64
SCLT1-208ENST00000506368 GADD45BO75293 160 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-208ENST00000506368 HCLS1P14317 486 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-208ENST00000506368 OTUD7AQ8TE49 926 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-208ENST00000506368 PAXBP1Q9Y5B6 917 aa19.06■□□□□ 0.64
SCLT1-208ENST00000506368 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
SCLT1-208ENST00000506368 FOXD4L5Q5VV16 416 aaPredicted RBP19.05■□□□□ 0.64
SCLT1-208ENST00000506368 C8orf58Q8NAV2 365 aa19.05■□□□□ 0.64
SCLT1-208ENST00000506368 FOXD4L4Q8WXT5 416 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms