RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 NFATC2IPQ8NCF5 419 aa30.22■■■□□ 2.43
HMGB2-204ENST00000506267 NUDCQ9Y266 331 aa30.22■■■□□ 2.43
HMGB2-204ENST00000506267 SLC4A9Q96Q91 983 aa30.21■■■□□ 2.43
HMGB2-204ENST00000506267 SGIP1Q9BQI5 828 aa30.21■■■□□ 2.43
HMGB2-204ENST00000506267 RNMTO43148 476 aaKnown RBP30.2■■■□□ 2.43
HMGB2-204ENST00000506267 ITPK1Q13572 414 aa30.2■■■□□ 2.43
HMGB2-204ENST00000506267 ZNF831Q5JPB2 1677 aa30.2■■■□□ 2.42
HMGB2-204ENST00000506267 MRC1P22897 1456 aa30.19■■■□□ 2.42
HMGB2-204ENST00000506267 HMGB2P26583 209 aaKnown RBP30.19■■■□□ 2.42
HMGB2-204ENST00000506267 LINC00116Q8NCU8 138 aa30.19■■■□□ 2.42
HMGB2-204ENST00000506267 PHACTR3Q96KR7 559 aa30.19■■■□□ 2.42
HMGB2-204ENST00000506267 PRKAR2BP31323 418 aa30.18■■■□□ 2.42
HMGB2-204ENST00000506267 COL24A1Q17RW2 1714 aa30.18■■■□□ 2.42
HMGB2-204ENST00000506267 U2AF1L5P0DN76 240 aaPredicted RBP30.17■■■□□ 2.42
HMGB2-204ENST00000506267 U2AF1Q01081 240 aaKnown RBP eCLIP30.17■■■□□ 2.424e-7■□□□□ 8.9
HMGB2-204ENST00000506267 RALBP1Q15311 655 aa30.17■■■□□ 2.42
HMGB2-204ENST00000506267 COL23A1Q86Y22 540 aaPredicted RBP30.17■■■□□ 2.42
HMGB2-204ENST00000506267 SLC16A10Q8TF71 515 aa30.17■■■□□ 2.42
HMGB2-204ENST00000506267 SLC52A2Q9HAB3 445 aa30.17■■■□□ 2.42
HMGB2-204ENST00000506267 ATP6V1AP38606 617 aa30.16■■■□□ 2.42
HMGB2-204ENST00000506267 AMIGO3Q86WK7 504 aa30.16■■■□□ 2.42
HMGB2-204ENST00000506267 UBR3Q6ZT12 1888 aa30.16■■■□□ 2.42
HMGB2-204ENST00000506267 GAS2L2Q8NHY3 880 aa30.15■■■□□ 2.42
HMGB2-204ENST00000506267 FCHSD2O94868 740 aa30.14■■■□□ 2.42
HMGB2-204ENST00000506267 MAP3K5Q99683 1374 aa30.13■■■□□ 2.41
HMGB2-204ENST00000506267 RBM42Q9BTD8 480 aaKnown RBP30.12■■■□□ 2.41
HMGB2-204ENST00000506267 PPP1R1BQ9UD71 204 aaPredicted RBP30.12■■■□□ 2.41
HMGB2-204ENST00000506267 COL5A3P25940 1745 aaPredicted RBP30.11■■■□□ 2.41
HMGB2-204ENST00000506267 IL17REQ8NFR9 667 aa30.11■■■□□ 2.41
HMGB2-204ENST00000506267 AK7Q96M32 723 aa30.11■■■□□ 2.41
HMGB2-204ENST00000506267 GNAT3A8MTJ3 354 aa30.1■■■□□ 2.41
HMGB2-204ENST00000506267 SMIM5Q71RC9 77 aa30.09■■■□□ 2.41
HMGB2-204ENST00000506267 PTCD1O75127 700 aaKnown RBP30.08■■■□□ 2.41
HMGB2-204ENST00000506267 FLAD1Q8NFF5 587 aa30.08■■■□□ 2.41
HMGB2-204ENST00000506267 CICQ96RK0 1608 aaPredicted RBP30.07■■■□□ 2.4
HMGB2-204ENST00000506267 MYH14Q7Z406 1995 aaKnown RBP30.06■■■□□ 2.4
HMGB2-204ENST00000506267 SIPA1L3O60292 1781 aaPredicted RBP30.06■■■□□ 2.4
HMGB2-204ENST00000506267 TJP1Q07157 1748 aa30.05■■■□□ 2.4
HMGB2-204ENST00000506267 CEMIPQ8WUJ3 1361 aa30.05■■■□□ 2.4
HMGB2-204ENST00000506267 SLC39A6Q13433 755 aa30.05■■■□□ 2.4
HMGB2-204ENST00000506267 MYBBP1AQ9BQG0 1328 aaKnown RBP30.04■■■□□ 2.4
HMGB2-204ENST00000506267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.04■■■□□ 2.4
HMGB2-204ENST00000506267 MSH5O43196 834 aa30.04■■■□□ 2.4
HMGB2-204ENST00000506267 SSFA2P28290 1259 aa30.04■■■□□ 2.4
HMGB2-204ENST00000506267 RC3H1Q5TC82 1133 aaKnown RBP30.04■■■□□ 2.4
HMGB2-204ENST00000506267 KCPQ6ZWJ8 1503 aa30.04■■■□□ 2.4
HMGB2-204ENST00000506267 GNPATO15228 680 aa30.03■■■□□ 2.4
HMGB2-204ENST00000506267 ARXQ96QS3 562 aa30.03■■■□□ 2.4
HMGB2-204ENST00000506267 CNTNAP4Q9C0A0 1308 aa30.02■■■□□ 2.4
HMGB2-204ENST00000506267 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
HMGB2-204ENST00000506267 UBR2Q8IWV8 1755 aa30.02■■■□□ 2.4
HMGB2-204ENST00000506267 PHF14O94880 888 aa30.01■■■□□ 2.39
HMGB2-204ENST00000506267 FHDC1Q9C0D6 1143 aaPredicted RBP30■■■□□ 2.39
HMGB2-204ENST00000506267 PRKRIP1Q9H875 184 aaPredicted RBP29.99■■■□□ 2.39
HMGB2-204ENST00000506267 POLD1P28340 1107 aa29.98■■■□□ 2.39
HMGB2-204ENST00000506267 TEFQ10587 303 aa29.98■■■□□ 2.39
HMGB2-204ENST00000506267 MSL1Q68DK7 614 aa29.98■■■□□ 2.39
HMGB2-204ENST00000506267 SYT17Q9BSW7 474 aa29.98■■■□□ 2.39
HMGB2-204ENST00000506267 RPS6KA4O75676 772 aa29.96■■■□□ 2.39
HMGB2-204ENST00000506267 CRKLP46109 303 aaKnown RBP29.96■■■□□ 2.39
HMGB2-204ENST00000506267 DNAJC10Q8IXB1 793 aa29.96■■■□□ 2.39
HMGB2-204ENST00000506267 RTCBQ9Y3I0 505 aaKnown RBP29.96■■■□□ 2.39
HMGB2-204ENST00000506267 DLG5Q8TDM6 1919 aa29.95■■■□□ 2.39
HMGB2-204ENST00000506267 HTATSF1O43719 755 aaKnown RBP29.94■■■□□ 2.38
HMGB2-204ENST00000506267 MCM10Q7L590 875 aa29.94■■■□□ 2.38
HMGB2-204ENST00000506267 ZNF316A6NFI3 1004 aaPredicted RBP29.93■■■□□ 2.38
HMGB2-204ENST00000506267 INTS5Q6P9B9 1019 aaKnown RBP29.93■■■□□ 2.38
HMGB2-204ENST00000506267 ZNF790Q6PG37 636 aa29.93■■■□□ 2.38
HMGB2-204ENST00000506267 VSIG10Q8N0Z9 540 aa29.93■■■□□ 2.38
HMGB2-204ENST00000506267 DCTN1Q14203 1278 aa29.92■■■□□ 2.38
HMGB2-204ENST00000506267 TRAPPC3LQ5T215 181 aa29.92■■■□□ 2.38
HMGB2-204ENST00000506267 ARHGEF1Q92888 912 aaKnown RBP29.92■■■□□ 2.38
HMGB2-204ENST00000506267 CYP19A1P11511 503 aaPredicted RBP29.91■■■□□ 2.38
HMGB2-204ENST00000506267 ADRA2BP18089 450 aa29.91■■■□□ 2.38
HMGB2-204ENST00000506267 RTF1Q92541 710 aaKnown RBP29.91■■■□□ 2.38
HMGB2-204ENST00000506267 ZNF496Q96IT1 587 aaPredicted RBP29.91■■■□□ 2.38
HMGB2-204ENST00000506267 C4AP0C0L4 1744 aa29.89■■■□□ 2.38
HMGB2-204ENST00000506267 NFE2L2Q16236 605 aa29.89■■■□□ 2.38
HMGB2-204ENST00000506267 TTC5Q8N0Z6 440 aa29.89■■■□□ 2.38
HMGB2-204ENST00000506267 PNNQ9H307 717 aaKnown RBP29.89■■■□□ 2.38
HMGB2-204ENST00000506267 KCNQ3O43525 872 aa29.88■■■□□ 2.37
HMGB2-204ENST00000506267 BTBD11A6QL63 1104 aa29.87■■■□□ 2.37
HMGB2-204ENST00000506267 NEFMP07197 916 aa29.87■■■□□ 2.37
HMGB2-204ENST00000506267 CCDC87Q9NVE4 849 aa29.87■■■□□ 2.37
HMGB2-204ENST00000506267 HEG1Q9ULI3 1381 aa29.87■■■□□ 2.37
HMGB2-204ENST00000506267 SOS1Q07889 1333 aaPredicted RBP29.83■■■□□ 2.37
HMGB2-204ENST00000506267 MAPK8IP3Q9UPT6 1336 aa29.83■■■□□ 2.37
HMGB2-204ENST00000506267 GYS1P13807 737 aa29.83■■■□□ 2.37
HMGB2-204ENST00000506267 RFC4P35249 363 aa29.82■■■□□ 2.36
HMGB2-204ENST00000506267 FMNL2Q96PY5 1086 aa29.82■■■□□ 2.36
HMGB2-204ENST00000506267 ZBTB1Q9Y2K1 713 aa29.82■■■□□ 2.36
HMGB2-204ENST00000506267 TAF7Q15545 349 aaPredicted RBP29.8■■■□□ 2.36
HMGB2-204ENST00000506267 KLHL34Q8N239 644 aa29.8■■■□□ 2.36
HMGB2-204ENST00000506267 NLGN2Q8NFZ4 835 aa29.8■■■□□ 2.36
HMGB2-204ENST00000506267 NLGN1Q8N2Q7 840 aa29.79■■■□□ 2.36
HMGB2-204ENST00000506267 SRP68Q9UHB9 627 aaKnown RBP29.79■■■□□ 2.36
HMGB2-204ENST00000506267 ADAMTS8Q9UP79 889 aa29.79■■■□□ 2.36
HMGB2-204ENST00000506267 USP42Q9H9J4 1324 aaKnown RBP29.78■■■□□ 2.36
HMGB2-204ENST00000506267 STARD3NLO95772 234 aa29.78■■■□□ 2.36
HMGB2-204ENST00000506267 THUMPD2Q9BTF0 503 aaKnown RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms