RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
SMARCAD1-205ENST00000506089 GAS2L1Q99501 681 aaPredicted RBP7.43□□□□□ -1.22
SMARCAD1-205ENST00000506089 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
SMARCAD1-205ENST00000506089 OXCT2Q9BYC2 517 aaPredicted RBP7.43□□□□□ -1.22
SMARCAD1-205ENST00000506089 CEP126Q9P2H0 1117 aa7.43□□□□□ -1.22
SMARCAD1-205ENST00000506089 SCTRP47872 440 aa7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 ALYREFQ86V81 257 aaKnown RBP7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 PHTF2Q8N3S3 785 aa7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 RRAGCQ9HB90 399 aa7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 NSFL1CQ9UNZ2 370 aaKnown RBP7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 ZNF330Q9Y3S2 320 aaPredicted RBP7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 DYRK1BQ9Y463 629 aa7.42□□□□□ -1.22
SMARCAD1-205ENST00000506089 H7C1W4 665 aa7.41□□□□□ -1.22
SMARCAD1-205ENST00000506089 UBTFP17480 764 aaKnown RBP7.41□□□□□ -1.22
SMARCAD1-205ENST00000506089 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
SMARCAD1-205ENST00000506089 CDCA7Q9BWT1 371 aaPredicted RBP7.41□□□□□ -1.22
SMARCAD1-205ENST00000506089 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
SMARCAD1-205ENST00000506089 C1QTNF9BB2RNN3 333 aa7.4□□□□□ -1.22
SMARCAD1-205ENST00000506089 ERVK-9P63128 1117 aa7.4□□□□□ -1.22
SMARCAD1-205ENST00000506089 EIF4G2P78344 907 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMARCAD1-205ENST00000506089 PCDHB11Q9Y5F2 797 aa7.4□□□□□ -1.22
SMARCAD1-205ENST00000506089 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
SMARCAD1-205ENST00000506089 WASHC4Q2M389 1173 aa7.39□□□□□ -1.23
SMARCAD1-205ENST00000506089 CD163Q86VB7 1156 aa7.39□□□□□ -1.23
SMARCAD1-205ENST00000506089 MEN1O00255 615 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 MAP2K3P46734 347 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 POU4F2Q12837 409 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 ZMYM1Q5SVZ6 1142 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 RNF20Q5VTR2 975 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 ADAMTS19Q8TE59 1207 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 SEMA6BQ9H3T3 888 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 OSBPL3Q9H4L5 887 aa7.38□□□□□ -1.23
SMARCAD1-205ENST00000506089 PIK3CDO00329 1044 aa7.37□□□□□ -1.23
SMARCAD1-205ENST00000506089 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
SMARCAD1-205ENST00000506089 NUCKS1Q9H1E3 243 aaKnown RBP7.37□□□□□ -1.23
SMARCAD1-205ENST00000506089 ALG2Q9H553 416 aa7.37□□□□□ -1.23
SMARCAD1-205ENST00000506089 CHIC2Q9UKJ5 165 aa7.37□□□□□ -1.23
SMARCAD1-205ENST00000506089 RAD21O60216 631 aa7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 TRAK2O60296 914 aa7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 HOXB4P17483 251 aaPredicted RBP7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 CHRNA4P43681 627 aa7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 LINC00114Q6XXX2 140 aa7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 KLRG1Q96E93 195 aa7.36□□□□□ -1.23
SMARCAD1-205ENST00000506089 THBS1P07996 1170 aa7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 GPC1P35052 558 aa7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 NBPF10Q6P3W6 841 aaKnown RBP7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 FNBP4Q8N3X1 1017 aaPredicted RBP7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 NBPF15Q8N660 670 aa7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 EDARADDQ8WWZ3 215 aa7.35□□□□□ -1.23
SMARCAD1-205ENST00000506089 ATP5J2-PTCD1G3V325 749 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 DOC2BQ14184 412 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 SLFNL1Q499Z3 407 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 CCDC125Q86Z20 511 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 RNF135Q8IUD6 432 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 KRTAP9-9Q9BYP9 154 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 KRTAP9-4Q9BYQ2 154 aa7.34□□□□□ -1.23
SMARCAD1-205ENST00000506089 STAU1O95793 577 aaKnown RBP7.33□□□□□ -1.24
SMARCAD1-205ENST00000506089 SOX11P35716 441 aa7.33□□□□□ -1.24
SMARCAD1-205ENST00000506089 SLC27A3Q5K4L6 730 aa7.33□□□□□ -1.24
SMARCAD1-205ENST00000506089 DOLKQ9UPQ8 538 aa7.33□□□□□ -1.24
SMARCAD1-205ENST00000506089 A0A1W2PRU2 124 aa7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 AMPD1P23109 780 aa7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 FOXD4L6Q3SYB3 417 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 FOXD4L3Q6VB84 417 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 PROSER2Q86WR7 435 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 ARHGEF10LQ9HCE6 1279 aa7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 GDF2Q9UK05 429 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-205ENST00000506089 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 GNB5O14775 395 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 F11P03951 625 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 PLPP7Q8NBV4 271 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 CFHR5Q9BXR6 569 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 TIMMDC1Q9NPL8 285 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 RAB6BQ9NRW1 208 aa7.31□□□□□ -1.24
SMARCAD1-205ENST00000506089 CYP2U1Q7Z449 544 aa7.3□□□□□ -1.24
SMARCAD1-205ENST00000506089 GOLGA6L1Q8N7Z2 621 aa7.3□□□□□ -1.24
SMARCAD1-205ENST00000506089 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
SMARCAD1-205ENST00000506089 GRIP2Q9C0E4 1043 aa7.3□□□□□ -1.24
SMARCAD1-205ENST00000506089 GPAMQ9HCL2 828 aa7.3□□□□□ -1.24
SMARCAD1-205ENST00000506089 A6NJR5 290 aa7.29□□□□□ -1.24
SMARCAD1-205ENST00000506089 IL2RAP01589 272 aa7.29□□□□□ -1.24
SMARCAD1-205ENST00000506089 HDGFL1Q5TGJ6 251 aa7.29□□□□□ -1.24
SMARCAD1-205ENST00000506089 NLRP3Q96P20 1036 aa7.29□□□□□ -1.24
SMARCAD1-205ENST00000506089 SPATA31C2B4DYI2 1134 aa7.28□□□□□ -1.24
SMARCAD1-205ENST00000506089 WASLO00401 505 aaPredicted RBP7.28□□□□□ -1.24
SMARCAD1-205ENST00000506089 CLN3Q13286 438 aa7.28□□□□□ -1.24
SMARCAD1-205ENST00000506089 SLCO4C1Q6ZQN7 724 aa7.28□□□□□ -1.24
SMARCAD1-205ENST00000506089 WWC1Q8IX03 1113 aa7.28□□□□□ -1.24
SMARCAD1-205ENST00000506089 HRH3Q9Y5N1 445 aa7.28□□□□□ -1.24
SMARCAD1-205ENST00000506089 BTBD11A6QL63 1104 aa7.27□□□□□ -1.25
SMARCAD1-205ENST00000506089 C2CD2LO14523 706 aa7.27□□□□□ -1.25
SMARCAD1-205ENST00000506089 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
SMARCAD1-205ENST00000506089 SKIP12755 728 aa7.27□□□□□ -1.25
SMARCAD1-205ENST00000506089 DGKGP49619 791 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms