RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 STK31Q9BXU1 1019 aa15.35■□□□□ 0.05
POLR2J3-211ENST00000506060 MIS18AQ9NYP9 233 aa15.35■□□□□ 0.05
POLR2J3-211ENST00000506060 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
POLR2J3-211ENST00000506060 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
POLR2J3-211ENST00000506060 API5Q9BZZ5 524 aaKnown RBP15.34■□□□□ 0.05
POLR2J3-211ENST00000506060 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
POLR2J3-211ENST00000506060 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
POLR2J3-211ENST00000506060 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.04
POLR2J3-211ENST00000506060 SLC52A2Q9HAB3 445 aa15.33■□□□□ 0.04
POLR2J3-211ENST00000506060 KDM3BQ7LBC6 1761 aa15.33■□□□□ 0.04
POLR2J3-211ENST00000506060 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
POLR2J3-211ENST00000506060 CYP27B1O15528 508 aa15.32■□□□□ 0.04
POLR2J3-211ENST00000506060 CABP4P57796 275 aa15.32■□□□□ 0.04
POLR2J3-211ENST00000506060 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
POLR2J3-211ENST00000506060 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
POLR2J3-211ENST00000506060 NKX1-1Q15270 411 aaPredicted RBP15.31■□□□□ 0.04
POLR2J3-211ENST00000506060 PTPRCP08575 1304 aa15.31■□□□□ 0.04
POLR2J3-211ENST00000506060 NRAPQ86VF7 1730 aa15.31■□□□□ 0.04
POLR2J3-211ENST00000506060 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
POLR2J3-211ENST00000506060 EXOC5O00471 708 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 KDM6AO15550 1401 aaPredicted RBP15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 SLIT2O94813 1529 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 TRIM27P14373 513 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 MRC1P22897 1456 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 MVPQ14764 893 aaKnown RBP15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 TTC5Q8N0Z6 440 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 PANK1Q8TE04 598 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 NGLY1Q96IV0 654 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 DDX19BQ9UMR2 479 aa15.3■□□□□ 0.04
POLR2J3-211ENST00000506060 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
POLR2J3-211ENST00000506060 UNC5CLQ8IV45 518 aa15.29■□□□□ 0.04
POLR2J3-211ENST00000506060 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-211ENST00000506060 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
POLR2J3-211ENST00000506060 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
POLR2J3-211ENST00000506060 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-211ENST00000506060 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
POLR2J3-211ENST00000506060 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
POLR2J3-211ENST00000506060 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
POLR2J3-211ENST00000506060 MEX3CQ5U5Q3 659 aaKnown RBP15.28■□□□□ 0.04
POLR2J3-211ENST00000506060 NFATC2IPQ8NCF5 419 aa15.28■□□□□ 0.04
POLR2J3-211ENST00000506060 WNK3Q9BYP7 1800 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 ITPRIPQ8IWB1 547 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 C8orf37Q96NL8 207 aa15.27■□□□□ 0.04
POLR2J3-211ENST00000506060 HSPA1LP34931 641 aa15.26■□□□□ 0.03
POLR2J3-211ENST00000506060 BARGINQ6ZT62 677 aa15.26■□□□□ 0.03
POLR2J3-211ENST00000506060 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-211ENST00000506060 RLBP1P12271 317 aa15.25■□□□□ 0.03
POLR2J3-211ENST00000506060 VPS72Q15906 364 aa15.25■□□□□ 0.03
POLR2J3-211ENST00000506060 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
POLR2J3-211ENST00000506060 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
POLR2J3-211ENST00000506060 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
POLR2J3-211ENST00000506060 SHANK3Q9BYB0 1731 aa15.24■□□□□ 0.03
POLR2J3-211ENST00000506060 DDB1Q16531 1140 aa15.24■□□□□ 0.03
POLR2J3-211ENST00000506060 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
POLR2J3-211ENST00000506060 ABCC4O15439 1325 aa15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 TMEM57Q8N5G2 664 aa15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-211ENST00000506060 LRP6O75581 1613 aa15.22■□□□□ 0.03
POLR2J3-211ENST00000506060 KCNQ3O43525 872 aa15.22■□□□□ 0.03
POLR2J3-211ENST00000506060 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-211ENST00000506060 USP21Q9UK80 565 aa15.22■□□□□ 0.03
POLR2J3-211ENST00000506060 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-211ENST00000506060 FLIIQ13045 1269 aa15.21■□□□□ 0.03
POLR2J3-211ENST00000506060 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-211ENST00000506060 TNNQ9UQP3 1299 aa15.21■□□□□ 0.03
POLR2J3-211ENST00000506060 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
POLR2J3-211ENST00000506060 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
POLR2J3-211ENST00000506060 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
POLR2J3-211ENST00000506060 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
POLR2J3-211ENST00000506060 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
POLR2J3-211ENST00000506060 BCL9LQ86UU0 1499 aa15.19■□□□□ 0.02
POLR2J3-211ENST00000506060 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
POLR2J3-211ENST00000506060 DDX58O95786 925 aaKnown RBP15.18■□□□□ 0.02
POLR2J3-211ENST00000506060 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-211ENST00000506060 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-211ENST00000506060 DDX21Q9NR30 783 aaKnown RBP eCLIP15.18■□□□□ 0.02
POLR2J3-211ENST00000506060 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
POLR2J3-211ENST00000506060 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
POLR2J3-211ENST00000506060 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
POLR2J3-211ENST00000506060 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
POLR2J3-211ENST00000506060 PAPPAQ13219 1627 aa15.16■□□□□ 0.02
POLR2J3-211ENST00000506060 AFF2P51816 1311 aa15.16■□□□□ 0.02
POLR2J3-211ENST00000506060 A0A0G2JS52 829 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 MYT1Q01538 1121 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 FAM98CQ17RN3 349 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 SLC4A10Q6U841 1118 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 G2E3Q7L622 706 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 TRPC5Q9UL62 973 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms