RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ITPK1Q13572 414 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 POLKQ9UBT6 870 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 ASAP1Q9ULH1 1129 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 KIAA1551Q9HCM1 1747 aa8.14□□□□□ -1.11
GYPB-205ENST00000505583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
GYPB-205ENST00000505583 TNNT2P45379 298 aaPredicted RBP8.13□□□□□ -1.11
GYPB-205ENST00000505583 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
GYPB-205ENST00000505583 CD2APQ9Y5K6 639 aa8.13□□□□□ -1.11
GYPB-205ENST00000505583 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 COL5A3P25940 1745 aaPredicted RBP8.12□□□□□ -1.11
GYPB-205ENST00000505583 LOC102724428A0A0B4J2F2 783 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 GIGYF1O75420 1035 aaPredicted RBP8.12□□□□□ -1.11
GYPB-205ENST00000505583 PHKG2P15735 406 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 SIK1P57059 783 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
GYPB-205ENST00000505583 SMARCC1Q92922 1105 aaPredicted RBP8.12□□□□□ -1.11
GYPB-205ENST00000505583 AK7Q96M32 723 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 SPG7Q9UQ90 795 aa8.12□□□□□ -1.11
GYPB-205ENST00000505583 N4BP2Q86UW6 1770 aaPredicted RBP8.12□□□□□ -1.11
GYPB-205ENST00000505583 KIF13BQ9NQT8 1826 aa8.11□□□□□ -1.11
GYPB-205ENST00000505583 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
GYPB-205ENST00000505583 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
GYPB-205ENST00000505583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.11□□□□□ -1.11
GYPB-205ENST00000505583 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
GYPB-205ENST00000505583 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
GYPB-205ENST00000505583 C4AP0C0L4 1744 aa8.11□□□□□ -1.11
GYPB-205ENST00000505583 ADCY9O60503 1353 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 KDRP35968 1356 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 IGSF1Q8N6C5 1336 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 MYH14Q7Z406 1995 aaKnown RBP8.1□□□□□ -1.11
GYPB-205ENST00000505583 GNPATO15228 680 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 SSFA2P28290 1259 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 ATP6V1AP38606 617 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 IFNL2Q8IZJ0 200 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
GYPB-205ENST00000505583 KDM6AO15550 1401 aaPredicted RBP8.1□□□□□ -1.11
GYPB-205ENST00000505583 POTEHQ6S545 545 aa8.09□□□□□ -1.11
GYPB-205ENST00000505583 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
GYPB-205ENST00000505583 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
GYPB-205ENST00000505583 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.11
GYPB-205ENST00000505583 CICQ96RK0 1608 aaPredicted RBP8.09□□□□□ -1.11
GYPB-205ENST00000505583 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.12
GYPB-205ENST00000505583 MMP10P09238 476 aa8.08□□□□□ -1.12
GYPB-205ENST00000505583 PANK3Q9H999 370 aa8.08□□□□□ -1.12
GYPB-205ENST00000505583 ZBTB12Q9Y330 459 aaPredicted RBP8.08□□□□□ -1.12
GYPB-205ENST00000505583 TJP1Q07157 1748 aa8.08□□□□□ -1.12
GYPB-205ENST00000505583 VIRMAQ69YN4 1812 aaKnown RBP8.08□□□□□ -1.12
GYPB-205ENST00000505583 SCN11AQ9UI33 1791 aa8.07□□□□□ -1.12
GYPB-205ENST00000505583 PXDNLA1KZ92 1463 aa8.07□□□□□ -1.12
GYPB-205ENST00000505583 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
GYPB-205ENST00000505583 ARHGEF1Q92888 912 aaKnown RBP8.07□□□□□ -1.12
GYPB-205ENST00000505583 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
GYPB-205ENST00000505583 GPBP1L1Q9HC44 474 aaPredicted RBP8.07□□□□□ -1.12
GYPB-205ENST00000505583 TIMELESSQ9UNS1 1208 aa8.07□□□□□ -1.12
GYPB-205ENST00000505583 ADAMTS7Q9UKP4 1686 aa8.07□□□□□ -1.12
GYPB-205ENST00000505583 A0A0G2JLW4 131 aa8.06□□□□□ -1.12
GYPB-205ENST00000505583 ERVV-2B6SEH9 535 aa8.06□□□□□ -1.12
GYPB-205ENST00000505583 C10orf71Q711Q0 1435 aa8.05□□□□□ -1.12
GYPB-205ENST00000505583 GYS1P13807 737 aa8.05□□□□□ -1.12
GYPB-205ENST00000505583 HMGB2P26583 209 aaKnown RBP8.05□□□□□ -1.12
GYPB-205ENST00000505583 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
GYPB-205ENST00000505583 ZNF530Q6P9A1 599 aaPredicted RBP8.05□□□□□ -1.12
GYPB-205ENST00000505583 DCAF5Q96JK2 942 aa8.05□□□□□ -1.12
GYPB-205ENST00000505583 RTCBQ9Y3I0 505 aaKnown RBP8.05□□□□□ -1.12
GYPB-205ENST00000505583 CNTNAP4Q9C0A0 1308 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 ARFGEF1Q9Y6D6 1849 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 KIF3CO14782 793 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 PTCD1O75127 700 aaKnown RBP8.04□□□□□ -1.12
GYPB-205ENST00000505583 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 DPEP1P16444 411 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 CABP4P57796 275 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
GYPB-205ENST00000505583 PLEKHO1Q53GL0 409 aaPredicted RBP8.04□□□□□ -1.12
GYPB-205ENST00000505583 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
GYPB-205ENST00000505583 SULT6B1Q6IMI4 303 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 SRP68Q9UHB9 627 aaKnown RBP8.04□□□□□ -1.12
GYPB-205ENST00000505583 PLEKHG2Q9H7P9 1386 aa8.04□□□□□ -1.12
GYPB-205ENST00000505583 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 HSP90AB1P08238 724 aaKnown RBP8.03□□□□□ -1.12
GYPB-205ENST00000505583 KCNA3P22001 575 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 IL13P35225 146 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 MTHFSP49914 203 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 DDR1Q08345 913 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 MORC1Q86VD1 984 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 BCS1LQ9Y276 419 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 CEP350Q5VT06 3117 aa8.03□□□□□ -1.12
GYPB-205ENST00000505583 AFDNP55196 1824 aaKnown RBP8.02□□□□□ -1.13
GYPB-205ENST00000505583 HSPA6P17066 643 aa8.02□□□□□ -1.13
GYPB-205ENST00000505583 RFC4P35249 363 aa8.02□□□□□ -1.13
GYPB-205ENST00000505583 CRKLP46109 303 aaKnown RBP8.02□□□□□ -1.13
GYPB-205ENST00000505583 TGFB2P61812 414 aa8.02□□□□□ -1.13
GYPB-205ENST00000505583 AMOTQ4VCS5 1084 aa8.02□□□□□ -1.13
GYPB-205ENST00000505583 INTS5Q6P9B9 1019 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms