RNA–Protein interactions for RNA: ENST00000504963.5

SDHC-207, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 4

Gene SDHC, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-207ENST00000504963 SLFN5Q08AF3 891 aa8.84□□□□□ -0.99
SDHC-207ENST00000504963 DDB1Q16531 1140 aa8.84□□□□□ -0.99
SDHC-207ENST00000504963 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
SDHC-207ENST00000504963 PNNQ9H307 717 aaKnown RBP8.84□□□□□ -0.99
SDHC-207ENST00000504963 C5P01031 1676 aa8.84□□□□□ -0.99
SDHC-207ENST00000504963 TNS1Q9HBL0 1735 aaKnown RBP8.83□□□□□ -1
SDHC-207ENST00000504963 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
SDHC-207ENST00000504963 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
SDHC-207ENST00000504963 MIS18AQ9NYP9 233 aa8.83□□□□□ -1
SDHC-207ENST00000504963 KCPQ6ZWJ8 1503 aa8.83□□□□□ -1
SDHC-207ENST00000504963 MYH14Q7Z406 1995 aaKnown RBP8.82□□□□□ -1
SDHC-207ENST00000504963 CHL1O00533 1208 aa8.82□□□□□ -1
SDHC-207ENST00000504963 KCNQ2O43526 872 aa8.82□□□□□ -1
SDHC-207ENST00000504963 KRT24Q2M2I5 525 aa8.82□□□□□ -1
SDHC-207ENST00000504963 WDR63Q8IWG1 891 aa8.82□□□□□ -1
SDHC-207ENST00000504963 NGEFQ8N5V2 710 aa8.82□□□□□ -1
SDHC-207ENST00000504963 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
SDHC-207ENST00000504963 DCAF5Q96JK2 942 aa8.82□□□□□ -1
SDHC-207ENST00000504963 HEG1Q9ULI3 1381 aa8.82□□□□□ -1
SDHC-207ENST00000504963 IL16Q14005 1332 aa8.81□□□□□ -1
SDHC-207ENST00000504963 LY75O60449 1722 aa8.81□□□□□ -1
SDHC-207ENST00000504963 TJP1Q07157 1748 aa8.81□□□□□ -1
SDHC-207ENST00000504963 C1orf141Q5JVX7 400 aa8.81□□□□□ -1
SDHC-207ENST00000504963 PIGBQ92521 554 aa8.81□□□□□ -1
SDHC-207ENST00000504963 SLC52A2Q9HAB3 445 aa8.81□□□□□ -1
SDHC-207ENST00000504963 MBIPQ9NS73 344 aa8.81□□□□□ -1
SDHC-207ENST00000504963 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
SDHC-207ENST00000504963 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
SDHC-207ENST00000504963 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
SDHC-207ENST00000504963 SLC39A6Q13433 755 aa8.8□□□□□ -1
SDHC-207ENST00000504963 KRT27Q7Z3Y8 459 aa8.8□□□□□ -1
SDHC-207ENST00000504963 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
SDHC-207ENST00000504963 ACSBG1Q96GR2 724 aa8.8□□□□□ -1
SDHC-207ENST00000504963 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
SDHC-207ENST00000504963 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
SDHC-207ENST00000504963 ERVV-2B6SEH9 535 aa8.79□□□□□ -1
SDHC-207ENST00000504963 GOLGA2Q08379 1002 aa8.79□□□□□ -1
SDHC-207ENST00000504963 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
SDHC-207ENST00000504963 TSPYL6Q8N831 410 aa8.79□□□□□ -1
SDHC-207ENST00000504963 CFAP44Q96MT7 982 aa8.79□□□□□ -1
SDHC-207ENST00000504963 IFT57Q9NWB7 429 aa8.79□□□□□ -1
SDHC-207ENST00000504963 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
SDHC-207ENST00000504963 ASAP1Q9ULH1 1129 aa8.79□□□□□ -1
SDHC-207ENST00000504963 COL5A3P25940 1745 aaPredicted RBP8.78□□□□□ -1
SDHC-207ENST00000504963 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
SDHC-207ENST00000504963 NEFMP07197 916 aa8.78□□□□□ -1
SDHC-207ENST00000504963 HSP90AB1P08238 724 aaKnown RBP8.78□□□□□ -1
SDHC-207ENST00000504963 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
SDHC-207ENST00000504963 C8orf58Q8NAV2 365 aa8.78□□□□□ -1
SDHC-207ENST00000504963 RTF1Q92541 710 aaKnown RBP8.78□□□□□ -1
SDHC-207ENST00000504963 ATG3Q9NT62 314 aa8.78□□□□□ -1
SDHC-207ENST00000504963 CACNA1FO60840 1977 aa8.78□□□□□ -1
SDHC-207ENST00000504963 LAMB4A4D0S4 1761 aa8.78□□□□□ -1
SDHC-207ENST00000504963 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
SDHC-207ENST00000504963 A0A0G2JS52 829 aa8.77□□□□□ -1.01
SDHC-207ENST00000504963 E9PSI1 815 aa8.77□□□□□ -1.01
SDHC-207ENST00000504963 EIF4A1P60842 406 aaKnown RBP8.77□□□□□ -1.01
SDHC-207ENST00000504963 MYT1Q01538 1121 aa8.77□□□□□ -1.01
SDHC-207ENST00000504963 PDE3BQ13370 1112 aa8.77□□□□□ -1.01
SDHC-207ENST00000504963 ZNF496Q96IT1 587 aaPredicted RBP8.77□□□□□ -1.01
SDHC-207ENST00000504963 RREB1Q92766 1687 aa8.77□□□□□ -1.01
SDHC-207ENST00000504963 CABP4P57796 275 aa8.76□□□□□ -1.01
SDHC-207ENST00000504963 GNAI1P63096 354 aa8.76□□□□□ -1.01
SDHC-207ENST00000504963 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
SDHC-207ENST00000504963 TEFQ10587 303 aa8.76□□□□□ -1.01
SDHC-207ENST00000504963 ZNF790Q6PG37 636 aa8.76□□□□□ -1.01
SDHC-207ENST00000504963 TSPYL4Q9UJ04 414 aa8.76□□□□□ -1.01
SDHC-207ENST00000504963 LAS1LQ9Y4W2 734 aaKnown RBP8.76□□□□□ -1.01
SDHC-207ENST00000504963 TUBGCP6Q96RT7 1819 aa8.75□□□□□ -1.01
SDHC-207ENST00000504963 BTBD11A6QL63 1104 aa8.75□□□□□ -1.01
SDHC-207ENST00000504963 VAMP4O75379 141 aa8.75□□□□□ -1.01
SDHC-207ENST00000504963 PROM2Q8N271 834 aa8.75□□□□□ -1.01
SDHC-207ENST00000504963 BABAM1Q9NWV8 329 aa8.75□□□□□ -1.01
SDHC-207ENST00000504963 RGPD3A6NKT7 1758 aaPredicted RBP8.74□□□□□ -1.01
SDHC-207ENST00000504963 RGPD4Q7Z3J3 1758 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 TRIM37O94972 964 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 KCNQ4P56696 695 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 ITPK1Q13572 414 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 FAM196AQ6ZSG2 479 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 LRP10Q7Z4F1 713 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 TMOD3Q9NYL9 352 aa8.74□□□□□ -1.01
SDHC-207ENST00000504963 ELL2O00472 640 aaPredicted RBP8.73□□□□□ -1.01
SDHC-207ENST00000504963 GIGYF1O75420 1035 aaPredicted RBP8.73□□□□□ -1.01
SDHC-207ENST00000504963 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
SDHC-207ENST00000504963 BCL11BQ9C0K0 894 aaPredicted RBP8.73□□□□□ -1.01
SDHC-207ENST00000504963 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
SDHC-207ENST00000504963 USP16Q9Y5T5 823 aa8.73□□□□□ -1.01
SDHC-207ENST00000504963 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
SDHC-207ENST00000504963 LRP5O75197 1615 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 TCERG1O14776 1098 aaKnown RBP8.72□□□□□ -1.01
SDHC-207ENST00000504963 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
SDHC-207ENST00000504963 CALD1Q05682 793 aaKnown RBP8.72□□□□□ -1.01
SDHC-207ENST00000504963 PDIA6Q15084 440 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 PROSER3Q2NL68 480 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 PPP4R3CPQ6ZMV5 832 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 DEFB132Q7Z7B7 95 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 AMIGO3Q86WK7 504 aa8.72□□□□□ -1.01
SDHC-207ENST00000504963 DNAJC10Q8IXB1 793 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms