RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
GYPB-204ENST00000504951 PLCG2P16885 1265 aa8.67□□□□□ -1.02
GYPB-204ENST00000504951 IP6K1Q92551 441 aa8.67□□□□□ -1.02
GYPB-204ENST00000504951 CCNL1Q9UK58 526 aaPredicted RBP8.67□□□□□ -1.02
GYPB-204ENST00000504951 FBXO3Q9UK99 471 aa8.67□□□□□ -1.02
GYPB-204ENST00000504951 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
GYPB-204ENST00000504951 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
GYPB-204ENST00000504951 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
GYPB-204ENST00000504951 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
GYPB-204ENST00000504951 KLRG1Q96E93 195 aa8.66□□□□□ -1.02
GYPB-204ENST00000504951 PUS7Q96PZ0 661 aaKnown RBP8.66□□□□□ -1.02
GYPB-204ENST00000504951 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.02
GYPB-204ENST00000504951 FSTL1Q12841 308 aa8.65□□□□□ -1.02
GYPB-204ENST00000504951 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
GYPB-204ENST00000504951 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
GYPB-204ENST00000504951 NSD3Q9BZ95 1437 aa8.64□□□□□ -1.03
GYPB-204ENST00000504951 USP47Q96K76 1375 aa8.64□□□□□ -1.03
GYPB-204ENST00000504951 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
GYPB-204ENST00000504951 TGFB2P61812 414 aa8.64□□□□□ -1.03
GYPB-204ENST00000504951 COL13A1Q5TAT6 717 aaPredicted RBP8.64□□□□□ -1.03
GYPB-204ENST00000504951 C10orf71Q711Q0 1435 aa8.63□□□□□ -1.03
GYPB-204ENST00000504951 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
GYPB-204ENST00000504951 FAM208AQ9UK61 1670 aaKnown RBP8.62□□□□□ -1.03
GYPB-204ENST00000504951 SSFA2P28290 1259 aa8.62□□□□□ -1.03
GYPB-204ENST00000504951 KCNQ4P56696 695 aa8.62□□□□□ -1.03
GYPB-204ENST00000504951 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
GYPB-204ENST00000504951 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
GYPB-204ENST00000504951 MON2Q7Z3U7 1717 aa8.61□□□□□ -1.03
GYPB-204ENST00000504951 SOX12O15370 315 aa8.61□□□□□ -1.03
GYPB-204ENST00000504951 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
GYPB-204ENST00000504951 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
GYPB-204ENST00000504951 CD163L1Q9NR16 1453 aa8.61□□□□□ -1.03
GYPB-204ENST00000504951 EDC4Q6P2E9 1401 aaKnown RBP8.61□□□□□ -1.03
GYPB-204ENST00000504951 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
GYPB-204ENST00000504951 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
GYPB-204ENST00000504951 NME9Q86XW9 330 aa8.6□□□□□ -1.03
GYPB-204ENST00000504951 TNS4Q8IZW8 715 aa8.6□□□□□ -1.03
GYPB-204ENST00000504951 LTN1O94822 1766 aa8.59□□□□□ -1.03
GYPB-204ENST00000504951 SLC34A2O95436 690 aa8.59□□□□□ -1.03
GYPB-204ENST00000504951 NKX1-1Q15270 411 aaPredicted RBP8.59□□□□□ -1.03
GYPB-204ENST00000504951 HDGFL2Q7Z4V5 671 aaPredicted RBP8.59□□□□□ -1.03
GYPB-204ENST00000504951 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
GYPB-204ENST00000504951 WDR90Q96KV7 1748 aa8.59□□□□□ -1.03
GYPB-204ENST00000504951 PLEKHG2Q9H7P9 1386 aa8.59□□□□□ -1.03
GYPB-204ENST00000504951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.58□□□□□ -1.04
GYPB-204ENST00000504951 PYGBP11216 843 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 HOXC9P31274 260 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.58□□□□□ -1.04
GYPB-204ENST00000504951 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 TAF1LQ8IZX4 1826 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 KIF13BQ9NQT8 1826 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 C5P01031 1676 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 PALLDQ8WX93 1383 aa8.58□□□□□ -1.04
GYPB-204ENST00000504951 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 MAP3K19Q56UN5 1328 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 ZC3H4Q9UPT8 1303 aaKnown RBP8.57□□□□□ -1.04
GYPB-204ENST00000504951 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 NLGN1Q8N2Q7 840 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 AK7Q96M32 723 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 NMRK2Q9NPI5 230 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 RTL1A6NKG5 1358 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 KIF24Q5T7B8 1368 aa8.57□□□□□ -1.04
GYPB-204ENST00000504951 PCDH11XQ9BZA7 1347 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 PCDH11YQ9BZA8 1340 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 MEGF6O75095 1541 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 UBR3Q6ZT12 1888 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 GSE1Q14687 1217 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 L3MBTL2Q969R5 705 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 C4BP0C0L5 1744 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
GYPB-204ENST00000504951 KDM2BQ8NHM5 1336 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 PCNTO95613 3336 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 SNPHO15079 494 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 TATP17735 454 aaPredicted RBP8.55□□□□□ -1.04
GYPB-204ENST00000504951 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
GYPB-204ENST00000504951 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 ZNF467Q7Z7K2 595 aaPredicted RBP8.55□□□□□ -1.04
GYPB-204ENST00000504951 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 C16orf71Q8IYS4 520 aaPredicted RBP8.55□□□□□ -1.04
GYPB-204ENST00000504951 SMC1BQ8NDV3 1235 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 RAPGEF4Q8WZA2 1011 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 SLC12A5Q9H2X9 1139 aa8.55□□□□□ -1.04
GYPB-204ENST00000504951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.55□□□□□ -1.04
GYPB-204ENST00000504951 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 CYP27B1O15528 508 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 ST18O60284 1047 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 KCNA3P22001 575 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 AMPHP49418 695 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 SIK1P57059 783 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 ARHGAP27Q6ZUM4 889 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 PIGBQ92521 554 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 COG3Q96JB2 828 aa8.54□□□□□ -1.04
GYPB-204ENST00000504951 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.54□□□□□ -1.04
GYPB-204ENST00000504951 MAP2P11137 1827 aaKnown RBP8.54□□□□□ -1.04
GYPB-204ENST00000504951 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 ROCK2O75116 1388 aaKnown RBP8.53□□□□□ -1.04
GYPB-204ENST00000504951 INSRP06213 1382 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms