RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KDM4AO75164 1064 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 PHF14O94880 888 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 CCDC83Q8IWF9 413 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 NECAB1Q8N987 351 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 COG3Q96JB2 828 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 POLKQ9UBT6 870 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 UNC13BO14795 1591 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 MCCP23508 829 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 CEBPZQ03701 1054 aaKnown RBP9.16□□□□□ -0.94
NEDD9-208ENST00000504387 ANKRD44Q8N8A2 993 aa9.16□□□□□ -0.94
NEDD9-208ENST00000504387 FCHSD2O94868 740 aa9.15□□□□□ -0.94
NEDD9-208ENST00000504387 FKBP5Q13451 457 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-208ENST00000504387 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
NEDD9-208ENST00000504387 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-208ENST00000504387 TRIM5Q9C035 493 aa9.15□□□□□ -0.94
NEDD9-208ENST00000504387 CEP152O94986 1710 aa9.15□□□□□ -0.94
NEDD9-208ENST00000504387 ANKRD36BQ8N2N9 1353 aa9.15□□□□□ -0.94
NEDD9-208ENST00000504387 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
NEDD9-208ENST00000504387 ASXL2Q76L83 1435 aa9.15□□□□□ -0.95
NEDD9-208ENST00000504387 MSH6P52701 1360 aa9.15□□□□□ -0.95
NEDD9-208ENST00000504387 ATP7AQ04656 1500 aa9.15□□□□□ -0.95
NEDD9-208ENST00000504387 IQGAP1P46940 1657 aa9.15□□□□□ -0.95
NEDD9-208ENST00000504387 SHPRHQ149N8 1683 aa9.15□□□□□ -0.95
NEDD9-208ENST00000504387 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 TPD52L1Q16890 204 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-208ENST00000504387 CWC27Q6UX04 472 aaKnown RBP9.14□□□□□ -0.95
NEDD9-208ENST00000504387 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 SMC3Q9UQE7 1217 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 TNNT1P13805 278 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 MX1P20591 662 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 TRPM2O94759 1503 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 ABCC4O15439 1325 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 NPATQ14207 1427 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 PNMA6EA0A0J9YXQ4 647 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 LARGE1O95461 756 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 SYT1P21579 422 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 UTP14CQ5TAP6 766 aaKnown RBP9.14□□□□□ -0.95
NEDD9-208ENST00000504387 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 ABCC1P33527 1531 aa9.14□□□□□ -0.95
NEDD9-208ENST00000504387 WDR33Q9C0J8 1336 aaKnown RBP9.13□□□□□ -0.95
NEDD9-208ENST00000504387 STK3Q13188 491 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 ERCC4Q92889 916 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-208ENST00000504387 GTPBP4Q9BZE4 634 aaKnown RBP9.13□□□□□ -0.95
NEDD9-208ENST00000504387 ABCA9Q8IUA7 1624 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 FOXO3O43524 673 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 NCBP1Q09161 790 aaKnown RBP9.13□□□□□ -0.95
NEDD9-208ENST00000504387 FILIP1Q7Z7B0 1213 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 IL16Q14005 1332 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 LAMC1P11047 1609 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 TCHHQ07283 1943 aa9.13□□□□□ -0.95
NEDD9-208ENST00000504387 GOLGA6L4A6NEF3 574 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 STX6O43752 255 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 GORABQ5T7V8 394 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 RASEFQ8IZ41 740 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 NAP1L2Q9ULW6 460 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-208ENST00000504387 LETM1O95202 739 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-208ENST00000504387 CASTP20810 708 aaKnown RBP9.12□□□□□ -0.95
NEDD9-208ENST00000504387 CHMLP26374 656 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 AK2P54819 239 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
NEDD9-208ENST00000504387 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
NEDD9-208ENST00000504387 ZSCAN22P10073 491 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-208ENST00000504387 LIG1P18858 919 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 RPAP2Q8IXW5 612 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-208ENST00000504387 ARHGAP45Q92619 1136 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 TMEM51Q9NW97 253 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 CFAP74Q9C0B2 1584 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 HMMRO75330 724 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 KIF20AO95235 890 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 GJB2P29033 226 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 FAM69CQ0P6D2 419 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 COL9A3Q14050 684 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-208ENST00000504387 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 CCDC112Q8NEF3 446 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 RPGRIP1LQ68CZ1 1315 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 ZFYVE16Q7Z3T8 1539 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 ARAP3Q8WWN8 1544 aa9.11□□□□□ -0.95
NEDD9-208ENST00000504387 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
NEDD9-208ENST00000504387 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 DDX11Q96FC9 970 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 LRRCC1Q9C099 1032 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 UBE2HP62256 183 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 HSP90AB2PQ58FF8 381 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 FAM184AQ8NB25 1140 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 GTF3C6Q969F1 213 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
NEDD9-208ENST00000504387 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 TSPYL4Q9UJ04 414 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 ABCA6Q8N139 1617 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 SURF6O75683 361 aaKnown RBP9.1□□□□□ -0.95
NEDD9-208ENST00000504387 RBM33Q96EV2 1170 aaKnown RBP9.1□□□□□ -0.95
NEDD9-208ENST00000504387 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 DACT1Q9NYF0 836 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
NEDD9-208ENST00000504387 RTL1A6NKG5 1358 aa9.1□□□□□ -0.95
NEDD9-208ENST00000504387 GOLGA6L6A8MZA4 724 aa9.09□□□□□ -0.95
NEDD9-208ENST00000504387 F13A1P00488 732 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms