RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 FCHSD2O94868 740 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 NUDT7P0C024 238 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 IL13P35225 146 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 EVA1CP58658 441 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 EIF4A2Q14240 407 aaKnown RBP12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
ARHGEF28-206ENST00000504003 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
ARHGEF28-206ENST00000504003 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
ARHGEF28-206ENST00000504003 HS6ST3Q8IZP7 471 aa12.16□□□□□ -0.46
ARHGEF28-206ENST00000504003 LTV1Q96GA3 475 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF28-206ENST00000504003 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
ARHGEF28-206ENST00000504003 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 PBX2P40425 430 aa12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 RUNDC1Q96C34 613 aa12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 YTHDC1Q96MU7 727 aaKnown RBP12.15□□□□□ -0.46
ARHGEF28-206ENST00000504003 HNRNPUQ00839 825 aaKnown RBP eCLIP12.14□□□□□ -0.47
ARHGEF28-206ENST00000504003 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
ARHGEF28-206ENST00000504003 ADAMTS2O95450 1211 aa12.13□□□□□ -0.47
ARHGEF28-206ENST00000504003 CHRNA2Q15822 529 aa12.13□□□□□ -0.47
ARHGEF28-206ENST00000504003 PPP1R37O75864 691 aa12.12□□□□□ -0.47
ARHGEF28-206ENST00000504003 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
ARHGEF28-206ENST00000504003 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
ARHGEF28-206ENST00000504003 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
ARHGEF28-206ENST00000504003 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
ARHGEF28-206ENST00000504003 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 COL18A1P39060 1754 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 HMOX1P09601 288 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 TOM1L2Q6ZVM7 507 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 EYA1Q99502 592 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 BTG4Q9NY30 223 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
ARHGEF28-206ENST00000504003 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 RAPGEF4Q8WZA2 1011 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 NGLY1Q96IV0 654 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
ARHGEF28-206ENST00000504003 NWD2Q9ULI1 1742 aa12.09□□□□□ -0.47
ARHGEF28-206ENST00000504003 PLEKHG2Q9H7P9 1386 aa12.09□□□□□ -0.47
ARHGEF28-206ENST00000504003 STRN4Q9NRL3 753 aa12.09□□□□□ -0.47
ARHGEF28-206ENST00000504003 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF28-206ENST00000504003 KDRP35968 1356 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 CAMTA1Q9Y6Y1 1673 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 APAF1O14727 1248 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
ARHGEF28-206ENST00000504003 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 TATP17735 454 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 CRB1P82279 1406 aa12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 PLEKHO1Q53GL0 409 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 CARD10Q9BWT7 1032 aa12.07□□□□□ -0.48
ARHGEF28-206ENST00000504003 FOXK1P85037 733 aa12.06□□□□□ -0.48
ARHGEF28-206ENST00000504003 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
ARHGEF28-206ENST00000504003 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
ARHGEF28-206ENST00000504003 CDCA7Q9BWT1 371 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF28-206ENST00000504003 SPG7Q9UQ90 795 aa12.06□□□□□ -0.48
ARHGEF28-206ENST00000504003 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 RIPK4P57078 832 aa12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 NFE2L2Q16236 605 aa12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
ARHGEF28-206ENST00000504003 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 C1orf141Q5JVX7 400 aa12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 PTCD2Q8WV60 388 aaKnown RBP12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 SLIT2O94813 1529 aa12.04□□□□□ -0.48
ARHGEF28-206ENST00000504003 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
ARHGEF28-206ENST00000504003 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
ARHGEF28-206ENST00000504003 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
ARHGEF28-206ENST00000504003 IL2RBP14784 551 aa12.03□□□□□ -0.48
ARHGEF28-206ENST00000504003 FNBP4Q8N3X1 1017 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms