RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
PRDM2-213ENST00000503842 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
PRDM2-213ENST00000503842 IFNL2Q8IZJ0 200 aa17.43■□□□□ 0.38
PRDM2-213ENST00000503842 GJD4Q96KN9 370 aaPredicted RBP17.43■□□□□ 0.38
PRDM2-213ENST00000503842 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
PRDM2-213ENST00000503842 PCDH11XQ9BZA7 1347 aa17.43■□□□□ 0.38
PRDM2-213ENST00000503842 PCDH11YQ9BZA8 1340 aa17.43■□□□□ 0.38
PRDM2-213ENST00000503842 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
PRDM2-213ENST00000503842 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
PRDM2-213ENST00000503842 MCM10Q7L590 875 aa17.42■□□□□ 0.38
PRDM2-213ENST00000503842 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
PRDM2-213ENST00000503842 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
PRDM2-213ENST00000503842 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
PRDM2-213ENST00000503842 THSD7AQ9UPZ6 1657 aa17.42■□□□□ 0.38
PRDM2-213ENST00000503842 MNX1P50219 401 aaPredicted RBP17.41■□□□□ 0.38
PRDM2-213ENST00000503842 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
PRDM2-213ENST00000503842 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
PRDM2-213ENST00000503842 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
PRDM2-213ENST00000503842 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
PRDM2-213ENST00000503842 QTRT2Q9H974 415 aaKnown RBP17.41■□□□□ 0.38
PRDM2-213ENST00000503842 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
PRDM2-213ENST00000503842 E9PSI1 815 aa17.4■□□□□ 0.38
PRDM2-213ENST00000503842 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
PRDM2-213ENST00000503842 TRMT2AQ8IZ69 625 aaKnown RBP17.4■□□□□ 0.38
PRDM2-213ENST00000503842 EXOC5O00471 708 aa17.39■□□□□ 0.37
PRDM2-213ENST00000503842 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
PRDM2-213ENST00000503842 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
PRDM2-213ENST00000503842 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
PRDM2-213ENST00000503842 ILDR1Q86SU0 546 aaPredicted RBP17.39■□□□□ 0.37
PRDM2-213ENST00000503842 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
PRDM2-213ENST00000503842 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
PRDM2-213ENST00000503842 VIRMAQ69YN4 1812 aaKnown RBP17.38■□□□□ 0.37
PRDM2-213ENST00000503842 ONECUT3O60422 494 aaPredicted RBP17.38■□□□□ 0.37
PRDM2-213ENST00000503842 ZNF853P0CG23 659 aa17.38■□□□□ 0.37
PRDM2-213ENST00000503842 DDB1Q16531 1140 aa17.38■□□□□ 0.37
PRDM2-213ENST00000503842 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
PRDM2-213ENST00000503842 IFT57Q9NWB7 429 aa17.38■□□□□ 0.37
PRDM2-213ENST00000503842 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
PRDM2-213ENST00000503842 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
PRDM2-213ENST00000503842 DCAF5Q96JK2 942 aa17.37■□□□□ 0.37
PRDM2-213ENST00000503842 MRC1P22897 1456 aa17.37■□□□□ 0.37
PRDM2-213ENST00000503842 GNAI1P63096 354 aa17.36■□□□□ 0.37
PRDM2-213ENST00000503842 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
PRDM2-213ENST00000503842 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
PRDM2-213ENST00000503842 MYH16Q9H6N6 1097 aa17.35■□□□□ 0.37
PRDM2-213ENST00000503842 CHL1O00533 1208 aa17.34■□□□□ 0.37
PRDM2-213ENST00000503842 SIPA1L3O60292 1781 aaPredicted RBP17.34■□□□□ 0.37
PRDM2-213ENST00000503842 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
PRDM2-213ENST00000503842 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
PRDM2-213ENST00000503842 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.36
PRDM2-213ENST00000503842 POTEHQ6S545 545 aa17.33■□□□□ 0.36
PRDM2-213ENST00000503842 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
PRDM2-213ENST00000503842 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
PRDM2-213ENST00000503842 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
PRDM2-213ENST00000503842 TEFQ10587 303 aa17.32■□□□□ 0.36
PRDM2-213ENST00000503842 SEPT12Q8IYM1 358 aa17.32■□□□□ 0.36
PRDM2-213ENST00000503842 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
PRDM2-213ENST00000503842 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
PRDM2-213ENST00000503842 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
PRDM2-213ENST00000503842 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
PRDM2-213ENST00000503842 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
PRDM2-213ENST00000503842 A0A0G2JS52 829 aa17.3■□□□□ 0.36
PRDM2-213ENST00000503842 MYT1Q01538 1121 aa17.3■□□□□ 0.36
PRDM2-213ENST00000503842 POTEAQ6S8J7 498 aa17.29■□□□□ 0.36
PRDM2-213ENST00000503842 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
PRDM2-213ENST00000503842 KDM3BQ7LBC6 1761 aa17.29■□□□□ 0.36
PRDM2-213ENST00000503842 CABP4P57796 275 aa17.28■□□□□ 0.36
PRDM2-213ENST00000503842 FAM212AQ96EL1 285 aa17.28■□□□□ 0.36
PRDM2-213ENST00000503842 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
PRDM2-213ENST00000503842 BCL9O00512 1426 aa17.28■□□□□ 0.36
PRDM2-213ENST00000503842 RXRBP28702 533 aa17.27■□□□□ 0.36
PRDM2-213ENST00000503842 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
PRDM2-213ENST00000503842 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-213ENST00000503842 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.35
PRDM2-213ENST00000503842 ITGB4P16144 1822 aa17.26■□□□□ 0.35
PRDM2-213ENST00000503842 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
PRDM2-213ENST00000503842 NUBP1P53384 320 aa17.26■□□□□ 0.35
PRDM2-213ENST00000503842 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
PRDM2-213ENST00000503842 BRWD3Q6RI45 1802 aa17.25■□□□□ 0.35
PRDM2-213ENST00000503842 KCNQ3O43525 872 aa17.24■□□□□ 0.35
PRDM2-213ENST00000503842 CT47B1P0C2W7 299 aaPredicted RBP17.24■□□□□ 0.35
PRDM2-213ENST00000503842 DCAF8Q5TAQ9 597 aa17.24■□□□□ 0.35
PRDM2-213ENST00000503842 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
PRDM2-213ENST00000503842 PAPPAQ13219 1627 aa17.24■□□□□ 0.35
PRDM2-213ENST00000503842 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
PRDM2-213ENST00000503842 RGS12O14924 1447 aa17.23■□□□□ 0.35
PRDM2-213ENST00000503842 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
PRDM2-213ENST00000503842 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
PRDM2-213ENST00000503842 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
PRDM2-213ENST00000503842 PIGBQ92521 554 aa17.23■□□□□ 0.35
PRDM2-213ENST00000503842 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
PRDM2-213ENST00000503842 HAX1O00165 279 aa17.22■□□□□ 0.35
PRDM2-213ENST00000503842 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
PRDM2-213ENST00000503842 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
PRDM2-213ENST00000503842 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
PRDM2-213ENST00000503842 ZNF790Q6PG37 636 aa17.22■□□□□ 0.35
PRDM2-213ENST00000503842 KRT27Q7Z3Y8 459 aa17.22■□□□□ 0.35
PRDM2-213ENST00000503842 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
PRDM2-213ENST00000503842 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.35
PRDM2-213ENST00000503842 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms