RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 EXOC6BQ9Y2D4 811 aa29.88■■■□□ 2.37
DDX41-202ENST00000503078 ACEP12821 1306 aa29.88■■■□□ 2.37
DDX41-202ENST00000503078 CHAMP1Q96JM3 812 aa29.87■■■□□ 2.37
DDX41-202ENST00000503078 TUBGCP6Q96RT7 1819 aa29.87■■■□□ 2.37
DDX41-202ENST00000503078 ARHGEF10O15013 1369 aa29.87■■■□□ 2.37
DDX41-202ENST00000503078 MBD3O95983 291 aa29.86■■■□□ 2.37
DDX41-202ENST00000503078 MCCP23508 829 aa29.86■■■□□ 2.37
DDX41-202ENST00000503078 RTF1Q92541 710 aaKnown RBP29.86■■■□□ 2.37
DDX41-202ENST00000503078 CUL4AQ13619 759 aa29.86■■■□□ 2.37
DDX41-202ENST00000503078 LRRCC1Q9C099 1032 aa29.86■■■□□ 2.37
DDX41-202ENST00000503078 USP31Q70CQ4 1352 aa29.85■■■□□ 2.37
DDX41-202ENST00000503078 BRD1O95696 1058 aa29.85■■■□□ 2.37
DDX41-202ENST00000503078 NSFL1CQ9UNZ2 370 aaKnown RBP29.85■■■□□ 2.37
DDX41-202ENST00000503078 SYCE3A1L190 88 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 FOXO3O43524 673 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 MTHFSDQ2M296 383 aaKnown RBP29.84■■■□□ 2.37
DDX41-202ENST00000503078 MAP3K19Q56UN5 1328 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 TSHZ3Q63HK5 1081 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 TOPAZ1Q8N9V7 1692 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 USP6P35125 1406 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 ROBO2Q9HCK4 1378 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 PLEKHG3A1L390 1219 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 MX1P20591 662 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 ANAPC15P60006 121 aa29.84■■■□□ 2.37
DDX41-202ENST00000503078 TERF1P54274 439 aa29.83■■■□□ 2.37
DDX41-202ENST00000503078 FOXD4L5Q5VV16 416 aaPredicted RBP29.83■■■□□ 2.37
DDX41-202ENST00000503078 FOXD4L4Q8WXT5 416 aaPredicted RBP29.83■■■□□ 2.37
DDX41-202ENST00000503078 ZNF500O60304 480 aaPredicted RBP29.83■■■□□ 2.37
DDX41-202ENST00000503078 INTS4Q96HW7 963 aaKnown RBP29.82■■■□□ 2.36
DDX41-202ENST00000503078 ADAMTS13Q76LX8 1427 aa29.82■■■□□ 2.36
DDX41-202ENST00000503078 STK31Q9BXU1 1019 aa29.82■■■□□ 2.36
DDX41-202ENST00000503078 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.81■■■□□ 2.36
DDX41-202ENST00000503078 PALD1Q9ULE6 856 aa29.81■■■□□ 2.36
DDX41-202ENST00000503078 GNAI3P08754 354 aa29.81■■■□□ 2.36
DDX41-202ENST00000503078 CHMLP26374 656 aa29.81■■■□□ 2.36
DDX41-202ENST00000503078 SSH2Q76I76 1423 aa29.8■■■□□ 2.36
DDX41-202ENST00000503078 ATP8B2P98198 1209 aa29.79■■■□□ 2.36
DDX41-202ENST00000503078 ANO2Q9NQ90 1003 aa29.79■■■□□ 2.36
DDX41-202ENST00000503078 CEBPAP49715 358 aaPredicted RBP29.78■■■□□ 2.36
DDX41-202ENST00000503078 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.78■■■□□ 2.36
DDX41-202ENST00000503078 RIMS1Q86UR5 1692 aaKnown RBP29.78■■■□□ 2.36
DDX41-202ENST00000503078 PNMA6EA0A0J9YXQ4 647 aa29.78■■■□□ 2.36
DDX41-202ENST00000503078 SOX12O15370 315 aa29.78■■■□□ 2.36
DDX41-202ENST00000503078 LTKP29376 864 aa29.78■■■□□ 2.36
DDX41-202ENST00000503078 RILPL2Q969X0 211 aa29.78■■■□□ 2.36
DDX41-202ENST00000503078 IL17RAQ96F46 866 aa29.78■■■□□ 2.36
DDX41-202ENST00000503078 STAP2Q9UGK3 403 aa29.78■■■□□ 2.36
DDX41-202ENST00000503078 PLEKHG1Q9ULL1 1385 aa29.77■■■□□ 2.36
DDX41-202ENST00000503078 TRIM6-TRIM34B2RNG4 842 aa29.77■■■□□ 2.36
DDX41-202ENST00000503078 ZKSCAN5Q9Y2L8 839 aa29.77■■■□□ 2.36
DDX41-202ENST00000503078 FMN2Q9NZ56 1722 aa29.77■■■□□ 2.36
DDX41-202ENST00000503078 FLIIQ13045 1269 aa29.77■■■□□ 2.36
DDX41-202ENST00000503078 SRCIN1Q9C0H9 1055 aa29.77■■■□□ 2.36
DDX41-202ENST00000503078 KDRP35968 1356 aa29.76■■■□□ 2.36
DDX41-202ENST00000503078 MCM5P33992 734 aa29.76■■■□□ 2.35
DDX41-202ENST00000503078 NUTM2FA1L443 756 aa29.75■■■□□ 2.35
DDX41-202ENST00000503078 FKBP5Q13451 457 aaPredicted RBP29.75■■■□□ 2.35
DDX41-202ENST00000503078 XRN1Q8IZH2 1706 aaKnown RBP29.74■■■□□ 2.35
DDX41-202ENST00000503078 CCDC30Q5VVM6 783 aa29.74■■■□□ 2.35
DDX41-202ENST00000503078 PDCL3Q9H2J4 239 aa29.74■■■□□ 2.35
DDX41-202ENST00000503078 CCDC39Q9UFE4 941 aa29.74■■■□□ 2.35
DDX41-202ENST00000503078 FLT4P35916 1363 aa29.73■■■□□ 2.35
DDX41-202ENST00000503078 FAM208AQ9UK61 1670 aaKnown RBP29.73■■■□□ 2.35
DDX41-202ENST00000503078 NOL8Q76FK4 1167 aaKnown RBP29.73■■■□□ 2.35
DDX41-202ENST00000503078 SBNO1A3KN83 1393 aa29.73■■■□□ 2.35
DDX41-202ENST00000503078 SYAP1Q96A49 352 aaPredicted RBP29.72■■■□□ 2.35
DDX41-202ENST00000503078 R3HCC1Q9Y3T6 440 aaKnown RBP29.71■■■□□ 2.35
DDX41-202ENST00000503078 AOX1Q06278 1338 aa29.71■■■□□ 2.35
DDX41-202ENST00000503078 XPCQ01831 940 aaPredicted RBP29.71■■■□□ 2.35
DDX41-202ENST00000503078 EPB41L2O43491 1005 aaKnown RBP29.7■■■□□ 2.35
DDX41-202ENST00000503078 HTATSF1O43719 755 aaKnown RBP29.7■■■□□ 2.35
DDX41-202ENST00000503078 TSPY26PQ9H489 355 aa29.7■■■□□ 2.35
DDX41-202ENST00000503078 IGSF1Q8N6C5 1336 aa29.7■■■□□ 2.34
DDX41-202ENST00000503078 TTC21AQ8NDW8 1320 aa29.7■■■□□ 2.34
DDX41-202ENST00000503078 UNC5CLQ8IV45 518 aa29.7■■■□□ 2.34
DDX41-202ENST00000503078 LRRFIP2Q9Y608 721 aaKnown RBP29.7■■■□□ 2.34
DDX41-202ENST00000503078 RNF214Q8ND24 703 aa29.69■■■□□ 2.34
DDX41-202ENST00000503078 EYA1Q99502 592 aa29.69■■■□□ 2.34
DDX41-202ENST00000503078 CSPP1Q1MSJ5 1256 aa29.69■■■□□ 2.34
DDX41-202ENST00000503078 UPF3BQ9BZI7 483 aaKnown RBP29.69■■■□□ 2.34
DDX41-202ENST00000503078 LRRC37A3O60309 1634 aa29.69■■■□□ 2.34
DDX41-202ENST00000503078 CEP170BQ9Y4F5 1589 aaPredicted RBP29.69■■■□□ 2.34
DDX41-202ENST00000503078 VSIG10Q8N0Z9 540 aa29.68■■■□□ 2.34
DDX41-202ENST00000503078 SLIT1O75093 1534 aa29.67■■■□□ 2.34
DDX41-202ENST00000503078 N4BP2Q86UW6 1770 aaPredicted RBP29.67■■■□□ 2.34
DDX41-202ENST00000503078 ARHGAP23Q9P227 1491 aa29.67■■■□□ 2.34
DDX41-202ENST00000503078 FER1L4A9Z1Z3 1794 aa29.67■■■□□ 2.34
DDX41-202ENST00000503078 WDR33Q9C0J8 1336 aaKnown RBP29.66■■■□□ 2.34
DDX41-202ENST00000503078 CACNA1FO60840 1977 aa29.66■■■□□ 2.34
DDX41-202ENST00000503078 HSPA4P34932 840 aa29.66■■■□□ 2.34
DDX41-202ENST00000503078 PXDNLA1KZ92 1463 aa29.65■■■□□ 2.34
DDX41-202ENST00000503078 SOS1Q07889 1333 aaPredicted RBP29.65■■■□□ 2.34
DDX41-202ENST00000503078 NECTIN2Q92692 538 aa29.65■■■□□ 2.34
DDX41-202ENST00000503078 PHF14O94880 888 aa29.64■■■□□ 2.34
DDX41-202ENST00000503078 AMPHP49418 695 aa29.64■■■□□ 2.34
DDX41-202ENST00000503078 EID1Q9Y6B2 187 aa29.64■■■□□ 2.34
DDX41-202ENST00000503078 USP44Q9H0E7 712 aa29.64■■■□□ 2.34
DDX41-202ENST00000503078 IL25Q9H293 177 aa29.63■■■□□ 2.33
DDX41-202ENST00000503078 PTPRUQ92729 1446 aa29.63■■■□□ 2.33
DDX41-202ENST00000503078 GNAT3A8MTJ3 354 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 645 ms