RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TATP17735 454 aaPredicted RBP9.07□□□□□ -0.96
PDGFC-203ENST00000502773 NUCB2P80303 420 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 NFKBIBQ15653 356 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 MCM10Q7L590 875 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 LRRCC1Q9C099 1032 aa9.07□□□□□ -0.96
PDGFC-203ENST00000502773 HIP1O00291 1037 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
PDGFC-203ENST00000502773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDGFC-203ENST00000502773 ALDH1L1O75891 902 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 FGD1P98174 961 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 ZNF530Q6P9A1 599 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-203ENST00000502773 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 DBF4Q9UBU7 674 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-203ENST00000502773 OVOS2A0A0G2JMS6 1433 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 FLIIQ13045 1269 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 LTV1Q96GA3 475 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-203ENST00000502773 NPHP3Q7Z494 1330 aa9.06□□□□□ -0.96
PDGFC-203ENST00000502773 ZBTB7CA1YPR0 619 aa9.05□□□□□ -0.96
PDGFC-203ENST00000502773 OS9Q13438 667 aaPredicted RBP9.05□□□□□ -0.96
PDGFC-203ENST00000502773 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
PDGFC-203ENST00000502773 TSPYL6Q8N831 410 aa9.05□□□□□ -0.96
PDGFC-203ENST00000502773 KRT28Q7Z3Y7 464 aa9.05□□□□□ -0.96
PDGFC-203ENST00000502773 ATP8B2P98198 1209 aa9.05□□□□□ -0.96
PDGFC-203ENST00000502773 CSB-PGBD3P0DP91 1061 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 PXDNLA1KZ92 1463 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 XRN1Q8IZH2 1706 aaKnown RBP9.04□□□□□ -0.96
PDGFC-203ENST00000502773 FAM83GA6ND36 823 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 BTBD11A6QL63 1104 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 DCTN1Q14203 1278 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 TTC5Q8N0Z6 440 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 DCCP43146 1447 aa9.04□□□□□ -0.96
PDGFC-203ENST00000502773 CRB1P82279 1406 aa9.03□□□□□ -0.96
PDGFC-203ENST00000502773 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.03□□□□□ -0.96
PDGFC-203ENST00000502773 GCP02774 474 aa9.03□□□□□ -0.96
PDGFC-203ENST00000502773 KIF1BPQ96EK5 621 aa9.03□□□□□ -0.96
PDGFC-203ENST00000502773 ANAPC15P60006 121 aa9.03□□□□□ -0.96
PDGFC-203ENST00000502773 OSBPL3Q9H4L5 887 aa9.03□□□□□ -0.96
PDGFC-203ENST00000502773 C9orf78Q9NZ63 289 aaPredicted RBP9.03□□□□□ -0.96
PDGFC-203ENST00000502773 DNTTIP2Q5QJE6 756 aaKnown RBP9.02□□□□□ -0.96
PDGFC-203ENST00000502773 K7ELQ4 463 aaPredicted RBP9.02□□□□□ -0.97
PDGFC-203ENST00000502773 FBLN1P23142 703 aa9.02□□□□□ -0.97
PDGFC-203ENST00000502773 MAPK8IP2Q13387 824 aaPredicted RBP9.02□□□□□ -0.97
PDGFC-203ENST00000502773 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.97
PDGFC-203ENST00000502773 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
PDGFC-203ENST00000502773 NALCNQ8IZF0 1738 aa9.02□□□□□ -0.97
PDGFC-203ENST00000502773 APPP05067 770 aa9.02□□□□□ -0.97
PDGFC-203ENST00000502773 DNAAF4Q8WXU2 420 aa9.02□□□□□ -0.97
PDGFC-203ENST00000502773 FMN2Q9NZ56 1722 aa9.02□□□□□ -0.97
PDGFC-203ENST00000502773 CLASRPQ8N2M8 674 aaKnown RBP9.02□□□□□ -0.97
PDGFC-203ENST00000502773 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
PDGFC-203ENST00000502773 TICAM2Q86XR7 235 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 TNNQ9UQP3 1299 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 ARHGEF25Q86VW2 580 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 ANKRD24Q8TF21 1146 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 ZNF142P52746 1687 aaPredicted RBP9.01□□□□□ -0.97
PDGFC-203ENST00000502773 IFNL2Q8IZJ0 200 aa9.01□□□□□ -0.97
PDGFC-203ENST00000502773 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
PDGFC-203ENST00000502773 SLKQ9H2G2 1235 aaPredicted RBP9□□□□□ -0.97
PDGFC-203ENST00000502773 RRP9O43818 475 aaKnown RBP9□□□□□ -0.97
PDGFC-203ENST00000502773 G3BP1Q13283 466 aaKnown RBP eCLIP9□□□□□ -0.97
PDGFC-203ENST00000502773 TBC1D9Q6ZT07 1266 aa9□□□□□ -0.97
PDGFC-203ENST00000502773 KIF1AQ12756 1690 aa9□□□□□ -0.97
PDGFC-203ENST00000502773 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
PDGFC-203ENST00000502773 MX1P20591 662 aa9□□□□□ -0.97
PDGFC-203ENST00000502773 ATP6V1DQ9Y5K8 247 aa9□□□□□ -0.97
PDGFC-203ENST00000502773 RNMTO43148 476 aaKnown RBP8.99□□□□□ -0.97
PDGFC-203ENST00000502773 NUTM2GQ5VZR2 741 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 TTC41PQ6P2S7 1318 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 EIF2S2P20042 333 aaKnown RBP8.99□□□□□ -0.97
PDGFC-203ENST00000502773 SYAP1Q96A49 352 aaPredicted RBP8.99□□□□□ -0.97
PDGFC-203ENST00000502773 C1orf115Q9H7X2 142 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 NLRP2Q9NX02 1062 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 USP54Q70EL1 1684 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
PDGFC-203ENST00000502773 GLRX3O76003 335 aaKnown RBP8.99□□□□□ -0.97
PDGFC-203ENST00000502773 PLCD3Q8N3E9 789 aa8.99□□□□□ -0.97
PDGFC-203ENST00000502773 IFIT2P09913 472 aaKnown RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 KSR2Q6VAB6 950 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 DHX37Q8IY37 1157 aaKnown RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 VIRMAQ69YN4 1812 aaKnown RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 GOLGA6L3A6NEY3 463 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 FOXO3O43524 673 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 TEX13AQ9BXU3 409 aaPredicted RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 USP19O94966 1318 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 EIF4A1P60842 406 aaKnown RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 NAP1L2Q9ULW6 460 aaPredicted RBP8.98□□□□□ -0.97
PDGFC-203ENST00000502773 IL17REQ8NFR9 667 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 LINS1Q8NG48 757 aa8.98□□□□□ -0.97
PDGFC-203ENST00000502773 MEIS3Q99687 375 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms