RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 ARHGEF28Q8N1W1 1705 aaKnown RBP6.23□□□□□ -1.41
MATR3-202ENST00000502422 PPIP5K1Q6PFW1 1433 aa6.23□□□□□ -1.41
MATR3-202ENST00000502422 KCNH5Q8NCM2 988 aa6.23□□□□□ -1.41
MATR3-202ENST00000502422 MS4A4AQ96JQ5 239 aa6.23□□□□□ -1.41
MATR3-202ENST00000502422 CARD10Q9BWT7 1032 aa6.23□□□□□ -1.41
MATR3-202ENST00000502422 AXIN2Q9Y2T1 843 aa6.23□□□□□ -1.41
MATR3-202ENST00000502422 TMEM132AQ24JP5 1023 aa6.22□□□□□ -1.41
MATR3-202ENST00000502422 GPBP1L1Q9HC44 474 aaPredicted RBP6.22□□□□□ -1.41
MATR3-202ENST00000502422 BRD4O60885 1362 aaPredicted RBP6.22□□□□□ -1.41
MATR3-202ENST00000502422 TOPAZ1Q8N9V7 1692 aa6.22□□□□□ -1.41
MATR3-202ENST00000502422 TNS4Q8IZW8 715 aa6.22□□□□□ -1.41
MATR3-202ENST00000502422 TFCP2L1Q9NZI6 479 aa6.22□□□□□ -1.41
MATR3-202ENST00000502422 CABP1Q9NZU7 370 aa6.22□□□□□ -1.41
MATR3-202ENST00000502422 CCDC7Q96M83 1385 aa6.21□□□□□ -1.42
MATR3-202ENST00000502422 WNK3Q9BYP7 1800 aa6.21□□□□□ -1.42
MATR3-202ENST00000502422 QSER1Q2KHR3 1735 aa6.21□□□□□ -1.42
MATR3-202ENST00000502422 ZNF827Q17R98 1081 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 ASTLQ6HA08 431 aaPredicted RBP6.2□□□□□ -1.42
MATR3-202ENST00000502422 ARHGEF25Q86VW2 580 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 SALL2Q9Y467 1007 aaPredicted RBP6.2□□□□□ -1.42
MATR3-202ENST00000502422 C10orf71Q711Q0 1435 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 RGPD5Q99666 1765 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 TTLL13PA6NNM8 815 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 NLGN2Q8NFZ4 835 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 ZNF526Q8TF50 670 aaPredicted RBP6.2□□□□□ -1.42
MATR3-202ENST00000502422 BMP2KQ9NSY1 1161 aaPredicted RBP6.2□□□□□ -1.42
MATR3-202ENST00000502422 NLRP2Q9NX02 1062 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 USP6P35125 1406 aa6.2□□□□□ -1.42
MATR3-202ENST00000502422 POTEJP0CG39 1038 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 IL2RBP14784 551 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 TIE1P35590 1138 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 CPSF1Q10570 1443 aaKnown RBP6.19□□□□□ -1.42
MATR3-202ENST00000502422 SLC27A3Q5K4L6 730 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 UBE2Q2Q8WVN8 375 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 SYTL4Q96C24 671 aaPredicted RBP6.19□□□□□ -1.42
MATR3-202ENST00000502422 LRRC4BQ9NT99 713 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 CENPJQ9HC77 1338 aaPredicted RBP6.19□□□□□ -1.42
MATR3-202ENST00000502422 SLIT3O75094 1523 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 TNS2Q63HR2 1409 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 DEKP35659 375 aaKnown RBP6.19□□□□□ -1.42
MATR3-202ENST00000502422 NHSQ6T4R5 1651 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 FANCIQ9NVI1 1328 aa6.19□□□□□ -1.42
MATR3-202ENST00000502422 COL18A1P39060 1754 aa6.18□□□□□ -1.42
MATR3-202ENST00000502422 ATP10DQ9P241 1426 aa6.18□□□□□ -1.42
MATR3-202ENST00000502422 YBX3P16989 372 aaKnown RBP eCLIP6.18□□□□□ -1.428e-10■■■■□ 19.9
MATR3-202ENST00000502422 PNPLA7Q6ZV29 1317 aa6.18□□□□□ -1.42
MATR3-202ENST00000502422 ADCY9O60503 1353 aa6.18□□□□□ -1.42
MATR3-202ENST00000502422 BTAF1O14981 1849 aa6.18□□□□□ -1.42
MATR3-202ENST00000502422 GOLGA2Q08379 1002 aa6.18□□□□□ -1.42
MATR3-202ENST00000502422 DDX54Q8TDD1 881 aaKnown RBP6.18□□□□□ -1.42
MATR3-202ENST00000502422 NBR1Q14596 966 aa6.17□□□□□ -1.42
MATR3-202ENST00000502422 NBPF1Q3BBV0 1214 aa6.17□□□□□ -1.42
MATR3-202ENST00000502422 TTC21BQ7Z4L5 1316 aa6.17□□□□□ -1.42
MATR3-202ENST00000502422 EVC2Q86UK5 1308 aa6.17□□□□□ -1.42
MATR3-202ENST00000502422 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
MATR3-202ENST00000502422 KCNQ4P56696 695 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 MKRN3Q13064 507 aaKnown RBP6.16□□□□□ -1.42
MATR3-202ENST00000502422 TTC21AQ8NDW8 1320 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 RAB3GAP2Q9H2M9 1393 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 TRPM1Q7Z4N2 1603 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 PIK3C2AO00443 1686 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 WDR90Q96KV7 1748 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 ERBB3P21860 1342 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 QRICH2Q9H0J4 1663 aa6.16□□□□□ -1.42
MATR3-202ENST00000502422 FSTL1Q12841 308 aa6.15□□□□□ -1.42
MATR3-202ENST00000502422 ERICH6BQ5W0A0 696 aa6.15□□□□□ -1.42
MATR3-202ENST00000502422 KCNV2Q8TDN2 545 aa6.15□□□□□ -1.42
MATR3-202ENST00000502422 CCNL1Q9UK58 526 aaPredicted RBP6.15□□□□□ -1.42
MATR3-202ENST00000502422 ABCC6O95255 1503 aa6.15□□□□□ -1.42
MATR3-202ENST00000502422 MSL1Q68DK7 614 aa6.15□□□□□ -1.43
MATR3-202ENST00000502422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.43
MATR3-202ENST00000502422 ANKRD24Q8TF21 1146 aa6.15□□□□□ -1.43
MATR3-202ENST00000502422 WDR70Q9NW82 654 aa6.15□□□□□ -1.43
MATR3-202ENST00000502422 TRIM35Q9UPQ4 493 aa6.15□□□□□ -1.43
MATR3-202ENST00000502422 CD2APQ9Y5K6 639 aa6.15□□□□□ -1.43
MATR3-202ENST00000502422 KIAA1210Q9ULL0 1709 aa6.15□□□□□ -1.43
MATR3-202ENST00000502422 CICQ96RK0 1608 aaPredicted RBP6.14□□□□□ -1.43
MATR3-202ENST00000502422 KTN1Q86UP2 1357 aaKnown RBP6.14□□□□□ -1.43
MATR3-202ENST00000502422 PRIM1P49642 420 aaKnown RBP6.14□□□□□ -1.43
MATR3-202ENST00000502422 COL23A1Q86Y22 540 aaPredicted RBP6.14□□□□□ -1.43
MATR3-202ENST00000502422 DNAJC5GQ8N7S2 189 aa6.14□□□□□ -1.43
MATR3-202ENST00000502422 KLRG1Q96E93 195 aa6.14□□□□□ -1.43
MATR3-202ENST00000502422 CCDC136Q96JN2 1154 aa6.14□□□□□ -1.43
MATR3-202ENST00000502422 WWC3Q9ULE0 1092 aa6.14□□□□□ -1.43
MATR3-202ENST00000502422 ATMINO43313 823 aaPredicted RBP6.14□□□□□ -1.43
MATR3-202ENST00000502422 ATN1P54259 1190 aaPredicted RBP6.14□□□□□ -1.43
MATR3-202ENST00000502422 USP47Q96K76 1375 aa6.13□□□□□ -1.43
MATR3-202ENST00000502422 FLAD1Q8NFF5 587 aa6.13□□□□□ -1.43
MATR3-202ENST00000502422 RBM46Q8TBY0 533 aaKnown RBP6.13□□□□□ -1.43
MATR3-202ENST00000502422 LTV1Q96GA3 475 aaPredicted RBP6.13□□□□□ -1.43
MATR3-202ENST00000502422 PRDM10Q9NQV6 1147 aa6.13□□□□□ -1.43
MATR3-202ENST00000502422 RGS19P49795 217 aa6.13□□□□□ -1.43
MATR3-202ENST00000502422 DPY19L2Q6NUT2 758 aa6.13□□□□□ -1.43
MATR3-202ENST00000502422 TMEM121BQ9BXQ6 578 aaPredicted RBP6.13□□□□□ -1.43
MATR3-202ENST00000502422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.13□□□□□ -1.434e-8■■■□□ 17.8
MATR3-202ENST00000502422 TUBGCP6Q96RT7 1819 aa6.12□□□□□ -1.43
MATR3-202ENST00000502422 ANKRD36BQ8N2N9 1353 aa6.12□□□□□ -1.43
MATR3-202ENST00000502422 KIF3CO14782 793 aa6.12□□□□□ -1.43
MATR3-202ENST00000502422 TOMM70O94826 608 aa6.12□□□□□ -1.43
MATR3-202ENST00000502422 NFAT5O94916 1531 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 552 ms