RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 TEFQ10587 303 aa16.21■□□□□ 0.19
YIPF3-209ENST00000500090 R3HDM1Q15032 1099 aaKnown RBP16.21■□□□□ 0.19
YIPF3-209ENST00000500090 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
YIPF3-209ENST00000500090 ADAMTS8Q9UP79 889 aa16.21■□□□□ 0.19
YIPF3-209ENST00000500090 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.18
YIPF3-209ENST00000500090 SRCAPQ6ZRS2 3230 aa16.2■□□□□ 0.18
YIPF3-209ENST00000500090 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
YIPF3-209ENST00000500090 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
YIPF3-209ENST00000500090 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
YIPF3-209ENST00000500090 MRC1P22897 1456 aa16.19■□□□□ 0.18
YIPF3-209ENST00000500090 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
YIPF3-209ENST00000500090 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
YIPF3-209ENST00000500090 KCNQ4P56696 695 aa16.18■□□□□ 0.18
YIPF3-209ENST00000500090 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
YIPF3-209ENST00000500090 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
YIPF3-209ENST00000500090 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
YIPF3-209ENST00000500090 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
YIPF3-209ENST00000500090 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
YIPF3-209ENST00000500090 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
YIPF3-209ENST00000500090 MCM10Q7L590 875 aa16.16■□□□□ 0.18
YIPF3-209ENST00000500090 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
YIPF3-209ENST00000500090 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
YIPF3-209ENST00000500090 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
YIPF3-209ENST00000500090 RIPK4P57078 832 aa16.15■□□□□ 0.18
YIPF3-209ENST00000500090 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
YIPF3-209ENST00000500090 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
YIPF3-209ENST00000500090 TTC5Q8N0Z6 440 aa16.15■□□□□ 0.18
YIPF3-209ENST00000500090 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
YIPF3-209ENST00000500090 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
YIPF3-209ENST00000500090 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
YIPF3-209ENST00000500090 ZNF827Q17R98 1081 aa16.14■□□□□ 0.17
YIPF3-209ENST00000500090 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 ITPK1Q13572 414 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 TAF7Q15545 349 aaPredicted RBP16.13■□□□□ 0.17
YIPF3-209ENST00000500090 ZNF790Q6PG37 636 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 VSIG10Q8N0Z9 540 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 ZNF831Q5JPB2 1677 aa16.13■□□□□ 0.17
YIPF3-209ENST00000500090 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
YIPF3-209ENST00000500090 LINC00116Q8NCU8 138 aa16.12■□□□□ 0.17
YIPF3-209ENST00000500090 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
YIPF3-209ENST00000500090 AK7Q96M32 723 aa16.12■□□□□ 0.17
YIPF3-209ENST00000500090 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
YIPF3-209ENST00000500090 C5P01031 1676 aa16.11■□□□□ 0.17
YIPF3-209ENST00000500090 TAF1LQ8IZX4 1826 aa16.11■□□□□ 0.17
YIPF3-209ENST00000500090 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-209ENST00000500090 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
YIPF3-209ENST00000500090 SLC16A10Q8TF71 515 aa16.1■□□□□ 0.17
YIPF3-209ENST00000500090 FMNL2Q96PY5 1086 aa16.1■□□□□ 0.17
YIPF3-209ENST00000500090 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-209ENST00000500090 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
YIPF3-209ENST00000500090 APAF1O14727 1248 aa16.09■□□□□ 0.17
YIPF3-209ENST00000500090 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
YIPF3-209ENST00000500090 CNTNAP4Q9C0A0 1308 aa16.09■□□□□ 0.17
YIPF3-209ENST00000500090 SSFA2P28290 1259 aa16.08■□□□□ 0.16
YIPF3-209ENST00000500090 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
YIPF3-209ENST00000500090 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
YIPF3-209ENST00000500090 SPON1Q9HCB6 807 aa16.08■□□□□ 0.16
YIPF3-209ENST00000500090 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
YIPF3-209ENST00000500090 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
YIPF3-209ENST00000500090 KCPQ6ZWJ8 1503 aa16.08■□□□□ 0.16
YIPF3-209ENST00000500090 QSER1Q2KHR3 1735 aa16.08■□□□□ 0.16
YIPF3-209ENST00000500090 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
YIPF3-209ENST00000500090 STARD3NLO95772 234 aa16.07■□□□□ 0.16
YIPF3-209ENST00000500090 THUMPD2Q9BTF0 503 aaKnown RBP16.07■□□□□ 0.16
YIPF3-209ENST00000500090 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
YIPF3-209ENST00000500090 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
YIPF3-209ENST00000500090 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
YIPF3-209ENST00000500090 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
YIPF3-209ENST00000500090 UBR2Q8IWV8 1755 aa16.06■□□□□ 0.16
YIPF3-209ENST00000500090 GNPATO15228 680 aa16.06■□□□□ 0.16
YIPF3-209ENST00000500090 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
YIPF3-209ENST00000500090 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
YIPF3-209ENST00000500090 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
YIPF3-209ENST00000500090 DNAJC10Q8IXB1 793 aa16.06■□□□□ 0.16
YIPF3-209ENST00000500090 MTFR1LQ9H019 292 aa16.06■□□□□ 0.16
YIPF3-209ENST00000500090 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
YIPF3-209ENST00000500090 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
YIPF3-209ENST00000500090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
YIPF3-209ENST00000500090 KCNQ3O43525 872 aa16.05■□□□□ 0.16
YIPF3-209ENST00000500090 RPS6KA4O75676 772 aa16.05■□□□□ 0.16
YIPF3-209ENST00000500090 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
YIPF3-209ENST00000500090 ADRA2BP18089 450 aa16.05■□□□□ 0.16
YIPF3-209ENST00000500090 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
YIPF3-209ENST00000500090 MSH5O43196 834 aa16.04■□□□□ 0.16
YIPF3-209ENST00000500090 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
YIPF3-209ENST00000500090 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
YIPF3-209ENST00000500090 TRAPPC3LQ5T215 181 aa16.04■□□□□ 0.16
YIPF3-209ENST00000500090 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
YIPF3-209ENST00000500090 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
YIPF3-209ENST00000500090 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
YIPF3-209ENST00000500090 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
YIPF3-209ENST00000500090 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
YIPF3-209ENST00000500090 INTS5Q6P9B9 1019 aaKnown RBP16.03■□□□□ 0.16
YIPF3-209ENST00000500090 FAM9BQ8IZU0 186 aa16.03■□□□□ 0.16
YIPF3-209ENST00000500090 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
YIPF3-209ENST00000500090 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
YIPF3-209ENST00000500090 PHF14O94880 888 aa16.02■□□□□ 0.16
YIPF3-209ENST00000500090 ATF5Q9Y2D1 282 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms