RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 SSH1Q8WYL5 1049 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 DDX19BQ9UMR2 479 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
NEAT1-201ENST00000499732 LRRC37A3O60309 1634 aa18.22■□□□□ 0.51
NEAT1-201ENST00000499732 NCAPD2Q15021 1401 aa18.22■□□□□ 0.51
NEAT1-201ENST00000499732 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
NEAT1-201ENST00000499732 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
NEAT1-201ENST00000499732 CRB1P82279 1406 aa18.21■□□□□ 0.51
NEAT1-201ENST00000499732 FAM208AQ9UK61 1670 aaKnown RBP18.21■□□□□ 0.51
NEAT1-201ENST00000499732 VPS72Q15906 364 aa18.21■□□□□ 0.51
NEAT1-201ENST00000499732 MCM10Q7L590 875 aa18.21■□□□□ 0.51
NEAT1-201ENST00000499732 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
NEAT1-201ENST00000499732 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
NEAT1-201ENST00000499732 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
NEAT1-201ENST00000499732 CCDC9Q9Y3X0 531 aaKnown RBP18.19■□□□□ 0.5
NEAT1-201ENST00000499732 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
NEAT1-201ENST00000499732 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
NEAT1-201ENST00000499732 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
NEAT1-201ENST00000499732 VAMP4O75379 141 aa18.18■□□□□ 0.5
NEAT1-201ENST00000499732 TRIM27P14373 513 aa18.18■□□□□ 0.5
NEAT1-201ENST00000499732 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
NEAT1-201ENST00000499732 C22orf23Q9BZE7 217 aa18.18■□□□□ 0.5
NEAT1-201ENST00000499732 SMC5Q8IY18 1101 aa18.17■□□□□ 0.5
NEAT1-201ENST00000499732 KIF16BQ96L93 1317 aa18.17■□□□□ 0.5
NEAT1-201ENST00000499732 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
NEAT1-201ENST00000499732 CHL1O00533 1208 aa18.16■□□□□ 0.5
NEAT1-201ENST00000499732 COL5A2P05997 1499 aaPredicted RBP18.16■□□□□ 0.5
NEAT1-201ENST00000499732 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
NEAT1-201ENST00000499732 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
NEAT1-201ENST00000499732 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
NEAT1-201ENST00000499732 CSB-PGBD3P0DP91 1061 aa18.15■□□□□ 0.5
NEAT1-201ENST00000499732 SEPT12Q8IYM1 358 aa18.15■□□□□ 0.5
NEAT1-201ENST00000499732 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
NEAT1-201ENST00000499732 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
NEAT1-201ENST00000499732 NLRP2Q9NX02 1062 aa18.15■□□□□ 0.5
NEAT1-201ENST00000499732 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.5
NEAT1-201ENST00000499732 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.5
NEAT1-201ENST00000499732 MAP3K5Q99683 1374 aa18.14■□□□□ 0.49
NEAT1-201ENST00000499732 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
NEAT1-201ENST00000499732 MCM4P33991 863 aa18.14■□□□□ 0.49
NEAT1-201ENST00000499732 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.49
NEAT1-201ENST00000499732 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
NEAT1-201ENST00000499732 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
NEAT1-201ENST00000499732 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
NEAT1-201ENST00000499732 GNAT3A8MTJ3 354 aa18.13■□□□□ 0.49
NEAT1-201ENST00000499732 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
NEAT1-201ENST00000499732 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
NEAT1-201ENST00000499732 GLI3P10071 1580 aa18.13■□□□□ 0.49
NEAT1-201ENST00000499732 PLCH1Q4KWH8 1693 aa18.12■□□□□ 0.49
NEAT1-201ENST00000499732 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
NEAT1-201ENST00000499732 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
NEAT1-201ENST00000499732 MFAP1P55081 439 aaKnown RBP18.12■□□□□ 0.49
NEAT1-201ENST00000499732 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
NEAT1-201ENST00000499732 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
NEAT1-201ENST00000499732 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
NEAT1-201ENST00000499732 NWD2Q9ULI1 1742 aa18.11■□□□□ 0.49
NEAT1-201ENST00000499732 A0A0G2JS52 829 aa18.11■□□□□ 0.49
NEAT1-201ENST00000499732 EP400Q96L91 3159 aa18.1■□□□□ 0.49
NEAT1-201ENST00000499732 FSD2A1L4K1 749 aa18.1■□□□□ 0.49
NEAT1-201ENST00000499732 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
NEAT1-201ENST00000499732 HSCBQ8IWL3 235 aa18.1■□□□□ 0.49
NEAT1-201ENST00000499732 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
NEAT1-201ENST00000499732 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
NEAT1-201ENST00000499732 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
NEAT1-201ENST00000499732 GOLGA6L3A6NEY3 463 aa18.09■□□□□ 0.49
NEAT1-201ENST00000499732 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
NEAT1-201ENST00000499732 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
NEAT1-201ENST00000499732 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
NEAT1-201ENST00000499732 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.09■□□□□ 0.49
NEAT1-201ENST00000499732 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
NEAT1-201ENST00000499732 EVA1CP58658 441 aa18.08■□□□□ 0.48
NEAT1-201ENST00000499732 NUCB1Q02818 461 aa18.08■□□□□ 0.48
NEAT1-201ENST00000499732 TOM1L2Q6ZVM7 507 aa18.08■□□□□ 0.48
NEAT1-201ENST00000499732 SNX21Q969T3 373 aa18.08■□□□□ 0.48
NEAT1-201ENST00000499732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.08■□□□□ 0.48
NEAT1-201ENST00000499732 DDX11L8A8MPP1 907 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 CHMP4BQ9H444 224 aaKnown RBP18.07■□□□□ 0.48
NEAT1-201ENST00000499732 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 NRAPQ86VF7 1730 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 ARHGAP45Q92619 1136 aa18.07■□□□□ 0.48
NEAT1-201ENST00000499732 MEGF6O75095 1541 aa18.06■□□□□ 0.48
NEAT1-201ENST00000499732 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
NEAT1-201ENST00000499732 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
NEAT1-201ENST00000499732 FAM98CQ17RN3 349 aaKnown RBP18.05■□□□□ 0.48
NEAT1-201ENST00000499732 ZNF530Q6P9A1 599 aaPredicted RBP18.05■□□□□ 0.48
NEAT1-201ENST00000499732 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
NEAT1-201ENST00000499732 DDIT3P35638 169 aa18.05■□□□□ 0.48
NEAT1-201ENST00000499732 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
NEAT1-201ENST00000499732 PARP4Q9UKK3 1724 aaKnown RBP18.04■□□□□ 0.48
NEAT1-201ENST00000499732 BMP2KLQ5H9B9 411 aa18.04■□□□□ 0.48
NEAT1-201ENST00000499732 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
NEAT1-201ENST00000499732 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
NEAT1-201ENST00000499732 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
NEAT1-201ENST00000499732 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms