RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 A0A1B0GUA9 196 aa12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 CASQ2O14958 399 aaPredicted RBP12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
AC055713.1-201ENST00000498967 CFAP100Q494V2 611 aa12.96□□□□□ -0.34
AC055713.1-201ENST00000498967 CCDC77Q9BR77 488 aa12.96□□□□□ -0.34
AC055713.1-201ENST00000498967 FIBPO43427 364 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 ZBTB16Q05516 673 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 MACROD2A1Z1Q3 448 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 ZNF76P36508 570 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 LRSAM1Q6UWE0 723 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
AC055713.1-201ENST00000498967 ERCC6LQ2NKX8 1250 aa12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 PRPHP41219 470 aa12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 JAKMIP2Q96AA8 810 aa12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 ARL1P40616 181 aaPredicted RBP12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 ZMAT2Q96NC0 199 aaKnown RBP12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
AC055713.1-201ENST00000498967 TDO2P48775 406 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 RBM28Q9NW13 759 aaKnown RBP12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 CYP46A1Q9Y6A2 500 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 CCDC89Q8N998 374 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 LMAN1P49257 510 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 PRR16Q569H4 304 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 UBTFL1P0CB47 393 aaPredicted RBP12.93□□□□□ -0.34
AC055713.1-201ENST00000498967 HSF2BPO75031 334 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 GSDMDP57764 484 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 SARNPP82979 210 aaKnown RBP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 KIAA0753Q2KHM9 967 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 STXBP4Q6ZWJ1 553 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 VCXQ9H320 206 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 GNAI3P08754 354 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 ATP6V1E1P36543 226 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 KRT32Q14532 448 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 ESPNB1AK53 854 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 SH3BP5O60239 455 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 RIC3Q7Z5B4 369 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 MYO10Q9HD67 2058 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 SSBP05455 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 CAVIN2O95810 425 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 EIF2S2P20042 333 aaKnown RBP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 EPSTI1Q96J88 318 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 PYM1Q9BRP8 204 aaKnown RBP12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
AC055713.1-201ENST00000498967 PRPF40AO75400 957 aaKnown RBP12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 CACNA2D3Q8IZS8 1091 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 GOLIM4O00461 696 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 PRC1O43663 620 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 MAP7Q14244 749 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 SERPINA10Q9UK55 444 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 NEK4P51957 841 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 PSMD1Q99460 953 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 USP37Q86T82 979 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 CTAGE6Q86UF2 777 aa12.91□□□□□ -0.34
AC055713.1-201ENST00000498967 GNAI1P63096 354 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 CTAGE5O15320 804 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 YEATS4O95619 227 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 GOLGA1Q92805 767 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 VCX3AQ9NNX9 186 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 MAP3K7CLP57077 242 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 CEP128Q6ZU80 1094 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 GABPB2Q8TAK5 448 aaPredicted RBP12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 STMN2Q93045 179 aa12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 CACYBPQ9HB71 228 aaKnown RBP12.9□□□□□ -0.34
AC055713.1-201ENST00000498967 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms