RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 C4BP0C0L5 1744 aa23.73■■□□□ 1.39
NECAB3-216ENST00000498353 MSH5O43196 834 aa23.72■■□□□ 1.39
NECAB3-216ENST00000498353 ITPK1Q13572 414 aa23.72■■□□□ 1.39
NECAB3-216ENST00000498353 LINC00116Q8NCU8 138 aa23.72■■□□□ 1.39
NECAB3-216ENST00000498353 COL24A1Q17RW2 1714 aa23.71■■□□□ 1.39
NECAB3-216ENST00000498353 NFATC2IPQ8NCF5 419 aa23.71■■□□□ 1.39
NECAB3-216ENST00000498353 MAP3K5Q99683 1374 aa23.7■■□□□ 1.38
NECAB3-216ENST00000498353 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
NECAB3-216ENST00000498353 DCAF8L1A6NGE4 600 aa23.69■■□□□ 1.38
NECAB3-216ENST00000498353 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
NECAB3-216ENST00000498353 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
NECAB3-216ENST00000498353 AMIGO3Q86WK7 504 aa23.69■■□□□ 1.38
NECAB3-216ENST00000498353 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
NECAB3-216ENST00000498353 SLC4A9Q96Q91 983 aa23.69■■□□□ 1.38
NECAB3-216ENST00000498353 SSFA2P28290 1259 aa23.68■■□□□ 1.38
NECAB3-216ENST00000498353 RBM42Q9BTD8 480 aaKnown RBP23.68■■□□□ 1.38
NECAB3-216ENST00000498353 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
NECAB3-216ENST00000498353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.66■■□□□ 1.38
NECAB3-216ENST00000498353 RNMTO43148 476 aaKnown RBP23.66■■□□□ 1.38
NECAB3-216ENST00000498353 SLC52A2Q9HAB3 445 aa23.66■■□□□ 1.38
NECAB3-216ENST00000498353 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
NECAB3-216ENST00000498353 PHF14O94880 888 aa23.64■■□□□ 1.37
NECAB3-216ENST00000498353 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
NECAB3-216ENST00000498353 GNPATO15228 680 aa23.63■■□□□ 1.37
NECAB3-216ENST00000498353 RC3H1Q5TC82 1133 aaKnown RBP23.63■■□□□ 1.37
NECAB3-216ENST00000498353 MSL1Q68DK7 614 aa23.63■■□□□ 1.37
NECAB3-216ENST00000498353 UBR3Q6ZT12 1888 aa23.63■■□□□ 1.37
NECAB3-216ENST00000498353 SMIM5Q71RC9 77 aa23.63■■□□□ 1.37
NECAB3-216ENST00000498353 NUDCQ9Y266 331 aa23.63■■□□□ 1.37
NECAB3-216ENST00000498353 PTCD1O75127 700 aaKnown RBP23.62■■□□□ 1.37
NECAB3-216ENST00000498353 GAS2L2Q8NHY3 880 aa23.61■■□□□ 1.37
NECAB3-216ENST00000498353 MRC1P22897 1456 aa23.61■■□□□ 1.37
NECAB3-216ENST00000498353 RSPH6AQ9H0K4 717 aa23.6■■□□□ 1.37
NECAB3-216ENST00000498353 RTCBQ9Y3I0 505 aaKnown RBP23.6■■□□□ 1.37
NECAB3-216ENST00000498353 ADAMTS7Q9UKP4 1686 aa23.6■■□□□ 1.37
NECAB3-216ENST00000498353 CNTNAP4Q9C0A0 1308 aa23.59■■□□□ 1.37
NECAB3-216ENST00000498353 PRKAR2BP31323 418 aa23.58■■□□□ 1.37
NECAB3-216ENST00000498353 KLHL34Q8N239 644 aa23.58■■□□□ 1.37
NECAB3-216ENST00000498353 GNAT3A8MTJ3 354 aa23.57■■□□□ 1.36
NECAB3-216ENST00000498353 RPS6KA4O75676 772 aa23.57■■□□□ 1.36
NECAB3-216ENST00000498353 TRAPPC3LQ5T215 181 aa23.57■■□□□ 1.36
NECAB3-216ENST00000498353 PHACTR3Q96KR7 559 aa23.57■■□□□ 1.36
NECAB3-216ENST00000498353 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
NECAB3-216ENST00000498353 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
NECAB3-216ENST00000498353 ADRA2BP18089 450 aa23.56■■□□□ 1.36
NECAB3-216ENST00000498353 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.362e-6■■□□□ 12.5
NECAB3-216ENST00000498353 UTRNP46939 3433 aa23.56■■□□□ 1.36
NECAB3-216ENST00000498353 FCHSD2O94868 740 aa23.55■■□□□ 1.36
NECAB3-216ENST00000498353 SLC39A6Q13433 755 aa23.55■■□□□ 1.36
NECAB3-216ENST00000498353 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
NECAB3-216ENST00000498353 NLGN2Q8NFZ4 835 aa23.54■■□□□ 1.36
NECAB3-216ENST00000498353 CICQ96RK0 1608 aaPredicted RBP23.54■■□□□ 1.36
NECAB3-216ENST00000498353 CRKLP46109 303 aaKnown RBP23.53■■□□□ 1.36
NECAB3-216ENST00000498353 ARHGEF1Q92888 912 aaKnown RBP23.53■■□□□ 1.36
NECAB3-216ENST00000498353 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
NECAB3-216ENST00000498353 YY1P25490 414 aa23.51■■□□□ 1.35
NECAB3-216ENST00000498353 TEFQ10587 303 aa23.51■■□□□ 1.35
NECAB3-216ENST00000498353 DNAJC10Q8IXB1 793 aa23.51■■□□□ 1.35
NECAB3-216ENST00000498353 VSIG10Q8N0Z9 540 aa23.51■■□□□ 1.35
NECAB3-216ENST00000498353 TJP1Q07157 1748 aa23.5■■□□□ 1.35
NECAB3-216ENST00000498353 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
NECAB3-216ENST00000498353 RFC4P35249 363 aa23.5■■□□□ 1.35
NECAB3-216ENST00000498353 NLGN1Q8N2Q7 840 aa23.5■■□□□ 1.35
NECAB3-216ENST00000498353 CEMIPQ8WUJ3 1361 aa23.5■■□□□ 1.35
NECAB3-216ENST00000498353 VIRMAQ69YN4 1812 aaKnown RBP23.49■■□□□ 1.35
NECAB3-216ENST00000498353 MYH14Q7Z406 1995 aaKnown RBP23.49■■□□□ 1.35
NECAB3-216ENST00000498353 DDX10Q13206 875 aaKnown RBP23.49■■□□□ 1.35
NECAB3-216ENST00000498353 GPR162Q16538 588 aa23.49■■□□□ 1.35
NECAB3-216ENST00000498353 INTS5Q6P9B9 1019 aaKnown RBP23.49■■□□□ 1.35
NECAB3-216ENST00000498353 RALBP1Q15311 655 aa23.48■■□□□ 1.35
NECAB3-216ENST00000498353 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
NECAB3-216ENST00000498353 CYP19A1P11511 503 aaPredicted RBP23.47■■□□□ 1.35
NECAB3-216ENST00000498353 GYS1P13807 737 aa23.47■■□□□ 1.35
NECAB3-216ENST00000498353 MMP10P09238 476 aa23.46■■□□□ 1.35
NECAB3-216ENST00000498353 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
NECAB3-216ENST00000498353 CCDC87Q9NVE4 849 aa23.46■■□□□ 1.35
NECAB3-216ENST00000498353 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
NECAB3-216ENST00000498353 GOLGB1Q14789 3259 aaKnown RBP23.43■■□□□ 1.34
NECAB3-216ENST00000498353 USP42Q9H9J4 1324 aaKnown RBP23.43■■□□□ 1.34
NECAB3-216ENST00000498353 RTF1Q92541 710 aaKnown RBP23.43■■□□□ 1.34
NECAB3-216ENST00000498353 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
NECAB3-216ENST00000498353 UBR2Q8IWV8 1755 aa23.42■■□□□ 1.34
NECAB3-216ENST00000498353 SOS1Q07889 1333 aaPredicted RBP23.42■■□□□ 1.34
NECAB3-216ENST00000498353 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
NECAB3-216ENST00000498353 SIPA1L3O60292 1781 aaPredicted RBP23.42■■□□□ 1.34
NECAB3-216ENST00000498353 HEG1Q9ULI3 1381 aa23.41■■□□□ 1.34
NECAB3-216ENST00000498353 BTBD11A6QL63 1104 aa23.41■■□□□ 1.34
NECAB3-216ENST00000498353 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
NECAB3-216ENST00000498353 C4AP0C0L4 1744 aa23.4■■□□□ 1.34
NECAB3-216ENST00000498353 STARD3NLO95772 234 aa23.4■■□□□ 1.34
NECAB3-216ENST00000498353 NEFMP07197 916 aa23.4■■□□□ 1.34
NECAB3-216ENST00000498353 MCM10Q7L590 875 aa23.4■■□□□ 1.34
NECAB3-216ENST00000498353 PLEKHF1Q96S99 279 aa23.4■■□□□ 1.34
NECAB3-216ENST00000498353 SRP68Q9UHB9 627 aaKnown RBP23.4■■□□□ 1.34
NECAB3-216ENST00000498353 ZBTB1Q9Y2K1 713 aa23.4■■□□□ 1.34
NECAB3-216ENST00000498353 GRIN3BO60391 1043 aa23.39■■□□□ 1.33
NECAB3-216ENST00000498353 YBX3P16989 372 aaKnown RBP eCLIP23.39■■□□□ 1.33
NECAB3-216ENST00000498353 FMNL2Q96PY5 1086 aa23.39■■□□□ 1.33
NECAB3-216ENST00000498353 FKBP8Q14318 412 aa23.38■■□□□ 1.33
NECAB3-216ENST00000498353 PNNQ9H307 717 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms