RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 EYA1Q99502 592 aa24.22■■□□□ 1.47
NKX2-1-202ENST00000498187 IGSF1Q8N6C5 1336 aa24.21■■□□□ 1.47
NKX2-1-202ENST00000498187 GLIPR1L2Q4G1C9 344 aa24.21■■□□□ 1.47
NKX2-1-202ENST00000498187 RRP9O43818 475 aaKnown RBP24.19■■□□□ 1.46
NKX2-1-202ENST00000498187 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
NKX2-1-202ENST00000498187 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
NKX2-1-202ENST00000498187 CWC22Q9HCG8 908 aaKnown RBP24.18■■□□□ 1.46
NKX2-1-202ENST00000498187 STK31Q9BXU1 1019 aa24.18■■□□□ 1.46
NKX2-1-202ENST00000498187 REC8O95072 547 aa24.17■■□□□ 1.46
NKX2-1-202ENST00000498187 HSP90AA2PQ14568 343 aaPredicted RBP24.17■■□□□ 1.46
NKX2-1-202ENST00000498187 GNAI2P04899 355 aa24.16■■□□□ 1.46
NKX2-1-202ENST00000498187 PDE1AP54750 535 aa24.16■■□□□ 1.46
NKX2-1-202ENST00000498187 ZNF445P59923 1031 aa24.16■■□□□ 1.46
NKX2-1-202ENST00000498187 OSBPL3Q9H4L5 887 aa24.16■■□□□ 1.46
NKX2-1-202ENST00000498187 LRRC37A3O60309 1634 aa24.16■■□□□ 1.46
NKX2-1-202ENST00000498187 FAM208AQ9UK61 1670 aaKnown RBP24.15■■□□□ 1.46
NKX2-1-202ENST00000498187 ERC2O15083 957 aa24.15■■□□□ 1.46
NKX2-1-202ENST00000498187 CYP2E1P05181 493 aaPredicted RBP24.15■■□□□ 1.46
NKX2-1-202ENST00000498187 MCTP1Q6DN14 999 aa24.15■■□□□ 1.46
NKX2-1-202ENST00000498187 ST18O60284 1047 aa24.15■■□□□ 1.46
NKX2-1-202ENST00000498187 EXOC6BQ9Y2D4 811 aa24.15■■□□□ 1.46
NKX2-1-202ENST00000498187 ZSCAN30Q86W11 494 aa24.14■■□□□ 1.45
NKX2-1-202ENST00000498187 HTATSF1O43719 755 aaKnown RBP24.13■■□□□ 1.45
NKX2-1-202ENST00000498187 FLIIQ13045 1269 aa24.13■■□□□ 1.45
NKX2-1-202ENST00000498187 TPM2P07951 284 aa24.13■■□□□ 1.45
NKX2-1-202ENST00000498187 NLRP6P59044 892 aa24.13■■□□□ 1.45
NKX2-1-202ENST00000498187 FKBP5Q13451 457 aaPredicted RBP24.12■■□□□ 1.45
NKX2-1-202ENST00000498187 CCDC30Q5VVM6 783 aa24.12■■□□□ 1.45
NKX2-1-202ENST00000498187 XRN1Q8IZH2 1706 aaKnown RBP24.12■■□□□ 1.45
NKX2-1-202ENST00000498187 GNAT3A8MTJ3 354 aa24.12■■□□□ 1.45
NKX2-1-202ENST00000498187 NECTIN2Q92692 538 aa24.11■■□□□ 1.45
NKX2-1-202ENST00000498187 LMBRD1Q9NUN5 540 aa24.11■■□□□ 1.45
NKX2-1-202ENST00000498187 NCLP19338 710 aaKnown RBP24.1■■□□□ 1.45
NKX2-1-202ENST00000498187 TSHZ3Q63HK5 1081 aa24.1■■□□□ 1.45
NKX2-1-202ENST00000498187 GNAI3P08754 354 aa24.1■■□□□ 1.45
NKX2-1-202ENST00000498187 HOXC9P31274 260 aa24.1■■□□□ 1.45
NKX2-1-202ENST00000498187 SALL3Q9BXA9 1300 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 PKP1Q13835 747 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 NUTM2GQ5VZR2 741 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 CAVIN1Q6NZI2 390 aaKnown RBP24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 LRRCC1Q9C099 1032 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 TUBGCP6Q96RT7 1819 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 PNMA6EA0A0J9YXQ4 647 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 MSNP26038 577 aaKnown RBP24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 ZSCAN23Q3MJ62 389 aa24.09■■□□□ 1.45
NKX2-1-202ENST00000498187 MARF1Q9Y4F3 1742 aaKnown RBP24.08■■□□□ 1.45
NKX2-1-202ENST00000498187 HS1BP3Q53T59 392 aa24.08■■□□□ 1.45
NKX2-1-202ENST00000498187 ZGPATQ8N5A5 531 aaKnown RBP24.08■■□□□ 1.45
NKX2-1-202ENST00000498187 NWD1Q149M9 1564 aa24.08■■□□□ 1.45
NKX2-1-202ENST00000498187 ADAMTSL3P82987 1691 aa24.08■■□□□ 1.44
NKX2-1-202ENST00000498187 CACNA1FO60840 1977 aa24.08■■□□□ 1.44
NKX2-1-202ENST00000498187 ATP8B2P98198 1209 aa24.07■■□□□ 1.44
NKX2-1-202ENST00000498187 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
NKX2-1-202ENST00000498187 MX1P20591 662 aa24.06■■□□□ 1.44
NKX2-1-202ENST00000498187 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
NKX2-1-202ENST00000498187 ANKARQ7Z5J8 1434 aa24.05■■□□□ 1.44
NKX2-1-202ENST00000498187 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
NKX2-1-202ENST00000498187 LTV1Q96GA3 475 aaPredicted RBP24.05■■□□□ 1.44
NKX2-1-202ENST00000498187 ESYT1Q9BSJ8 1104 aa24.04■■□□□ 1.44
NKX2-1-202ENST00000498187 LRRFIP2Q9Y608 721 aaKnown RBP24.04■■□□□ 1.44
NKX2-1-202ENST00000498187 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
NKX2-1-202ENST00000498187 SOS1Q07889 1333 aaPredicted RBP24.03■■□□□ 1.44
NKX2-1-202ENST00000498187 PRPF40AO75400 957 aaKnown RBP24.02■■□□□ 1.44
NKX2-1-202ENST00000498187 OFD1O75665 1012 aa24.02■■□□□ 1.44
NKX2-1-202ENST00000498187 KIAA1211Q6ZU35 1233 aa24.02■■□□□ 1.44
NKX2-1-202ENST00000498187 PXDNLA1KZ92 1463 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 NEK4P51957 841 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 ABTB2Q8N961 1025 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 USP54Q70EL1 1684 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 RILPL2Q969X0 211 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 BABAM1Q9NWV8 329 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 ZDHHC9Q9Y397 364 aa24.01■■□□□ 1.43
NKX2-1-202ENST00000498187 TRIM6-TRIM34B2RNG4 842 aa24■■□□□ 1.43
NKX2-1-202ENST00000498187 USP44Q9H0E7 712 aa24■■□□□ 1.43
NKX2-1-202ENST00000498187 RBSNQ9H1K0 784 aa24■■□□□ 1.43
NKX2-1-202ENST00000498187 KCNA6P17658 529 aa24■■□□□ 1.43
NKX2-1-202ENST00000498187 CHMLP26374 656 aa23.99■■□□□ 1.43
NKX2-1-202ENST00000498187 USHBP1Q8N6Y0 703 aa23.99■■□□□ 1.43
NKX2-1-202ENST00000498187 PDLIM2Q96JY6 352 aa23.99■■□□□ 1.43
NKX2-1-202ENST00000498187 STAP2Q9UGK3 403 aa23.99■■□□□ 1.43
NKX2-1-202ENST00000498187 UBTFL1P0CB47 393 aaPredicted RBP23.99■■□□□ 1.43
NKX2-1-202ENST00000498187 TERF1P54274 439 aa23.99■■□□□ 1.43
NKX2-1-202ENST00000498187 PRIM1P49642 420 aaKnown RBP23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 GPT2Q8TD30 523 aa23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 MCCP23508 829 aa23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 MCM2P49736 904 aa23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 TMX3Q96JJ7 454 aa23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 SRCIN1Q9C0H9 1055 aa23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 NOL7Q9UMY1 257 aaKnown RBP23.98■■□□□ 1.43
NKX2-1-202ENST00000498187 PHAXQ9H814 394 aaKnown RBP23.97■■□□□ 1.43
NKX2-1-202ENST00000498187 ANO2Q9NQ90 1003 aa23.97■■□□□ 1.43
NKX2-1-202ENST00000498187 PALD1Q9ULE6 856 aa23.97■■□□□ 1.43
NKX2-1-202ENST00000498187 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
NKX2-1-202ENST00000498187 UNC5CLQ8IV45 518 aa23.96■■□□□ 1.43
NKX2-1-202ENST00000498187 LRSAM1Q6UWE0 723 aa23.95■■□□□ 1.43
NKX2-1-202ENST00000498187 LTN1O94822 1766 aa23.95■■□□□ 1.42
NKX2-1-202ENST00000498187 MBD3O95983 291 aa23.95■■□□□ 1.42
NKX2-1-202ENST00000498187 IL1RAPL2Q9NP60 686 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms