RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
RBM28-208ENST00000495327 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
RBM28-208ENST00000495327 ASAP1Q9ULH1 1129 aa17.95■□□□□ 0.46
RBM28-208ENST00000495327 TJP1Q07157 1748 aa17.95■□□□□ 0.46
RBM28-208ENST00000495327 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
RBM28-208ENST00000495327 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
RBM28-208ENST00000495327 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
RBM28-208ENST00000495327 CABP4P57796 275 aa17.92■□□□□ 0.46
RBM28-208ENST00000495327 MTHFSDQ2M296 383 aaKnown RBP17.91■□□□□ 0.46
RBM28-208ENST00000495327 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
RBM28-208ENST00000495327 MAP3K5Q99683 1374 aa17.91■□□□□ 0.46
RBM28-208ENST00000495327 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
RBM28-208ENST00000495327 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
RBM28-208ENST00000495327 AK7Q96M32 723 aa17.9■□□□□ 0.46
RBM28-208ENST00000495327 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
RBM28-208ENST00000495327 ATP6V1AP38606 617 aa17.89■□□□□ 0.45
RBM28-208ENST00000495327 ITPK1Q13572 414 aa17.89■□□□□ 0.45
RBM28-208ENST00000495327 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
RBM28-208ENST00000495327 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
RBM28-208ENST00000495327 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
RBM28-208ENST00000495327 GAS2L2Q8NHY3 880 aa17.88■□□□□ 0.45
RBM28-208ENST00000495327 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
RBM28-208ENST00000495327 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
RBM28-208ENST00000495327 KCPQ6ZWJ8 1503 aa17.88■□□□□ 0.45
RBM28-208ENST00000495327 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
RBM28-208ENST00000495327 SSFA2P28290 1259 aa17.87■□□□□ 0.45
RBM28-208ENST00000495327 SLC4A9Q96Q91 983 aa17.87■□□□□ 0.45
RBM28-208ENST00000495327 DLG5Q8TDM6 1919 aa17.86■□□□□ 0.45
RBM28-208ENST00000495327 POLD1P28340 1107 aa17.86■□□□□ 0.45
RBM28-208ENST00000495327 ARXQ96QS3 562 aa17.86■□□□□ 0.45
RBM28-208ENST00000495327 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
RBM28-208ENST00000495327 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
RBM28-208ENST00000495327 AMIGO3Q86WK7 504 aa17.85■□□□□ 0.45
RBM28-208ENST00000495327 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
RBM28-208ENST00000495327 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
RBM28-208ENST00000495327 FHDC1Q9C0D6 1143 aaPredicted RBP17.85■□□□□ 0.45
RBM28-208ENST00000495327 MSH5O43196 834 aa17.84■□□□□ 0.45
RBM28-208ENST00000495327 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
RBM28-208ENST00000495327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.83■□□□□ 0.44
RBM28-208ENST00000495327 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.44
RBM28-208ENST00000495327 GNPATO15228 680 aa17.83■□□□□ 0.44
RBM28-208ENST00000495327 FCHSD2O94868 740 aa17.83■□□□□ 0.44
RBM28-208ENST00000495327 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
RBM28-208ENST00000495327 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.44
RBM28-208ENST00000495327 RALBP1Q15311 655 aa17.83■□□□□ 0.44
RBM28-208ENST00000495327 RC3H1Q5TC82 1133 aaKnown RBP17.83■□□□□ 0.44
RBM28-208ENST00000495327 CEMIPQ8WUJ3 1361 aa17.82■□□□□ 0.44
RBM28-208ENST00000495327 DDX10Q13206 875 aaKnown RBP17.82■□□□□ 0.44
RBM28-208ENST00000495327 SYT17Q9BSW7 474 aa17.82■□□□□ 0.44
RBM28-208ENST00000495327 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
RBM28-208ENST00000495327 PHF14O94880 888 aa17.81■□□□□ 0.44
RBM28-208ENST00000495327 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
RBM28-208ENST00000495327 ADRA2BP18089 450 aa17.79■□□□□ 0.44
RBM28-208ENST00000495327 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
RBM28-208ENST00000495327 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
RBM28-208ENST00000495327 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
RBM28-208ENST00000495327 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
RBM28-208ENST00000495327 TEFQ10587 303 aa17.78■□□□□ 0.44
RBM28-208ENST00000495327 CHD4Q14839 1912 aa17.77■□□□□ 0.44
RBM28-208ENST00000495327 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
RBM28-208ENST00000495327 SLC39A6Q13433 755 aa17.77■□□□□ 0.44
RBM28-208ENST00000495327 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
RBM28-208ENST00000495327 UTRNP46939 3433 aa17.76■□□□□ 0.43
RBM28-208ENST00000495327 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
RBM28-208ENST00000495327 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
RBM28-208ENST00000495327 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
RBM28-208ENST00000495327 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
RBM28-208ENST00000495327 GOLGB1Q14789 3259 aaKnown RBP17.75■□□□□ 0.43
RBM28-208ENST00000495327 TRAPPC3LQ5T215 181 aa17.75■□□□□ 0.43
RBM28-208ENST00000495327 KDM3BQ7LBC6 1761 aa17.75■□□□□ 0.43
RBM28-208ENST00000495327 LAMB4A4D0S4 1761 aa17.74■□□□□ 0.43
RBM28-208ENST00000495327 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
RBM28-208ENST00000495327 TTC5Q8N0Z6 440 aa17.74■□□□□ 0.43
RBM28-208ENST00000495327 KIAA1551Q9HCM1 1747 aa17.73■□□□□ 0.43
RBM28-208ENST00000495327 HTATSF1O43719 755 aaKnown RBP17.73■□□□□ 0.43
RBM28-208ENST00000495327 ZNF790Q6PG37 636 aa17.73■□□□□ 0.43
RBM28-208ENST00000495327 ARHGEF1Q92888 912 aaKnown RBP17.73■□□□□ 0.43
RBM28-208ENST00000495327 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
RBM28-208ENST00000495327 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
RBM28-208ENST00000495327 SCN7AQ01118 1682 aa17.73■□□□□ 0.43
RBM28-208ENST00000495327 NEFMP07197 916 aa17.72■□□□□ 0.43
RBM28-208ENST00000495327 CYP19A1P11511 503 aaPredicted RBP17.72■□□□□ 0.43
RBM28-208ENST00000495327 INTS5Q6P9B9 1019 aaKnown RBP17.72■□□□□ 0.43
RBM28-208ENST00000495327 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
RBM28-208ENST00000495327 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
RBM28-208ENST00000495327 CCDC87Q9NVE4 849 aa17.72■□□□□ 0.43
RBM28-208ENST00000495327 RFC4P35249 363 aa17.71■□□□□ 0.43
RBM28-208ENST00000495327 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
RBM28-208ENST00000495327 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
RBM28-208ENST00000495327 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
RBM28-208ENST00000495327 GYS1P13807 737 aa17.7■□□□□ 0.42
RBM28-208ENST00000495327 NLGN1Q8N2Q7 840 aa17.7■□□□□ 0.42
RBM28-208ENST00000495327 NLGN2Q8NFZ4 835 aa17.7■□□□□ 0.42
RBM28-208ENST00000495327 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
RBM28-208ENST00000495327 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
RBM28-208ENST00000495327 COL15A1P39059 1388 aa17.69■□□□□ 0.42
RBM28-208ENST00000495327 BCORQ6W2J9 1755 aa17.69■□□□□ 0.42
RBM28-208ENST00000495327 BTBD11A6QL63 1104 aa17.69■□□□□ 0.42
RBM28-208ENST00000495327 MCM10Q7L590 875 aa17.69■□□□□ 0.42
RBM28-208ENST00000495327 PRKRIP1Q9H875 184 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms