RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
PDS5B-208ENST00000493653 PHKG2P15735 406 aa16.16■□□□□ 0.18
PDS5B-208ENST00000493653 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
PDS5B-208ENST00000493653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■■■□ 25.3
PDS5B-208ENST00000493653 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
PDS5B-208ENST00000493653 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
PDS5B-208ENST00000493653 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
PDS5B-208ENST00000493653 AK7Q96M32 723 aa16.15■□□□□ 0.18
PDS5B-208ENST00000493653 CHD4Q14839 1912 aa16.14■□□□□ 0.17
PDS5B-208ENST00000493653 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
PDS5B-208ENST00000493653 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
PDS5B-208ENST00000493653 PHF14O94880 888 aa16.13■□□□□ 0.17
PDS5B-208ENST00000493653 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
PDS5B-208ENST00000493653 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
PDS5B-208ENST00000493653 KDM6AO15550 1401 aaPredicted RBP16.12■□□□□ 0.17
PDS5B-208ENST00000493653 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
PDS5B-208ENST00000493653 SIK1P57059 783 aa16.12■□□□□ 0.17
PDS5B-208ENST00000493653 GPR162Q16538 588 aa16.12■□□□□ 0.17
PDS5B-208ENST00000493653 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
PDS5B-208ENST00000493653 KDRP35968 1356 aa16.12■□□□□ 0.17
PDS5B-208ENST00000493653 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
PDS5B-208ENST00000493653 AEBP1Q8IUX7 1158 aa16.11■□□□□ 0.17
PDS5B-208ENST00000493653 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
PDS5B-208ENST00000493653 FLAD1Q8NFF5 587 aa16.11■□□□□ 0.17
PDS5B-208ENST00000493653 ASAP1Q9ULH1 1129 aa16.11■□□□□ 0.17
PDS5B-208ENST00000493653 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
PDS5B-208ENST00000493653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
PDS5B-208ENST00000493653 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
PDS5B-208ENST00000493653 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
PDS5B-208ENST00000493653 GNPATO15228 680 aa16.08■□□□□ 0.16
PDS5B-208ENST00000493653 ATP6V1AP38606 617 aa16.08■□□□□ 0.16
PDS5B-208ENST00000493653 ITPK1Q13572 414 aa16.08■□□□□ 0.16
PDS5B-208ENST00000493653 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
PDS5B-208ENST00000493653 ZNF784Q8NCA9 323 aaPredicted RBP16.08■□□□□ 0.16
PDS5B-208ENST00000493653 ATG3Q9NT62 314 aa16.08■□□□□ 0.16
PDS5B-208ENST00000493653 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.16
PDS5B-208ENST00000493653 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
PDS5B-208ENST00000493653 SSFA2P28290 1259 aa16.07■□□□□ 0.16
PDS5B-208ENST00000493653 DCAF5Q96JK2 942 aa16.07■□□□□ 0.16
PDS5B-208ENST00000493653 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
PDS5B-208ENST00000493653 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
PDS5B-208ENST00000493653 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
PDS5B-208ENST00000493653 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
PDS5B-208ENST00000493653 YBX3P16989 372 aaKnown RBP eCLIP16.04■□□□□ 0.165e-6■■■□□ 19.1
PDS5B-208ENST00000493653 IL13P35225 146 aa16.04■□□□□ 0.16
PDS5B-208ENST00000493653 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
PDS5B-208ENST00000493653 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
PDS5B-208ENST00000493653 C4AP0C0L4 1744 aa16.04■□□□□ 0.16
PDS5B-208ENST00000493653 TJP1Q07157 1748 aa16.03■□□□□ 0.16
PDS5B-208ENST00000493653 CABP4P57796 275 aa16.03■□□□□ 0.16
PDS5B-208ENST00000493653 CICQ96RK0 1608 aaPredicted RBP16.02■□□□□ 0.16
PDS5B-208ENST00000493653 MTHFSP49914 203 aa16.02■□□□□ 0.16
PDS5B-208ENST00000493653 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.16
PDS5B-208ENST00000493653 SLC4A9Q96Q91 983 aa16.02■□□□□ 0.16
PDS5B-208ENST00000493653 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
PDS5B-208ENST00000493653 MRC1P22897 1456 aa16.02■□□□□ 0.15
PDS5B-208ENST00000493653 CNTNAP4Q9C0A0 1308 aa16■□□□□ 0.15
PDS5B-208ENST00000493653 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
PDS5B-208ENST00000493653 TULP1O00294 542 aaPredicted RBP16■□□□□ 0.15
PDS5B-208ENST00000493653 VIRMAQ69YN4 1812 aaKnown RBP16■□□□□ 0.15
PDS5B-208ENST00000493653 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
PDS5B-208ENST00000493653 HMOX1P09601 288 aa15.99■□□□□ 0.15
PDS5B-208ENST00000493653 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
PDS5B-208ENST00000493653 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
PDS5B-208ENST00000493653 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
PDS5B-208ENST00000493653 PTCD1O75127 700 aaKnown RBP15.98■□□□□ 0.15
PDS5B-208ENST00000493653 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
PDS5B-208ENST00000493653 KIAA1551Q9HCM1 1747 aa15.97■□□□□ 0.15
PDS5B-208ENST00000493653 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
PDS5B-208ENST00000493653 MMP10P09238 476 aa15.97■□□□□ 0.15
PDS5B-208ENST00000493653 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
PDS5B-208ENST00000493653 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
PDS5B-208ENST00000493653 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
PDS5B-208ENST00000493653 C10orf71Q711Q0 1435 aa15.96■□□□□ 0.15
PDS5B-208ENST00000493653 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
PDS5B-208ENST00000493653 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
PDS5B-208ENST00000493653 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
PDS5B-208ENST00000493653 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
PDS5B-208ENST00000493653 KCPQ6ZWJ8 1503 aa15.95■□□□□ 0.14
PDS5B-208ENST00000493653 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
PDS5B-208ENST00000493653 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
PDS5B-208ENST00000493653 CRKLP46109 303 aaKnown RBP15.94■□□□□ 0.14
PDS5B-208ENST00000493653 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
PDS5B-208ENST00000493653 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
PDS5B-208ENST00000493653 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
PDS5B-208ENST00000493653 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
PDS5B-208ENST00000493653 RPS6KA4O75676 772 aa15.93■□□□□ 0.14
PDS5B-208ENST00000493653 RFC4P35249 363 aa15.93■□□□□ 0.14
PDS5B-208ENST00000493653 UBR2Q8IWV8 1755 aa15.92■□□□□ 0.14
PDS5B-208ENST00000493653 GIGYF1O75420 1035 aaPredicted RBP15.92■□□□□ 0.14
PDS5B-208ENST00000493653 GYS1P13807 737 aa15.92■□□□□ 0.14
PDS5B-208ENST00000493653 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
PDS5B-208ENST00000493653 LGR6Q9HBX8 967 aa15.92■□□□□ 0.14
PDS5B-208ENST00000493653 ADCY9O60503 1353 aa15.91■□□□□ 0.14
PDS5B-208ENST00000493653 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
PDS5B-208ENST00000493653 NLGN1Q8N2Q7 840 aa15.91■□□□□ 0.14
PDS5B-208ENST00000493653 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
PDS5B-208ENST00000493653 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
PDS5B-208ENST00000493653 SRP68Q9UHB9 627 aaKnown RBP15.9■□□□□ 0.14
PDS5B-208ENST00000493653 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms