RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
TSC1-207ENST00000493467 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
TSC1-207ENST00000493467 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
TSC1-207ENST00000493467 GOLGA6L3A6NEY3 463 aa12.05□□□□□ -0.48
TSC1-207ENST00000493467 CDC45O75419 566 aa12.05□□□□□ -0.48
TSC1-207ENST00000493467 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
TSC1-207ENST00000493467 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
TSC1-207ENST00000493467 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
TSC1-207ENST00000493467 PTMSP20962 102 aa12.04□□□□□ -0.48
TSC1-207ENST00000493467 USP31Q70CQ4 1352 aa12.04□□□□□ -0.48
TSC1-207ENST00000493467 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
TSC1-207ENST00000493467 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
TSC1-207ENST00000493467 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
TSC1-207ENST00000493467 RAB3GAP1Q15042 981 aa12.03□□□□□ -0.48
TSC1-207ENST00000493467 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
TSC1-207ENST00000493467 DCTPP1Q9H773 170 aa12.03□□□□□ -0.48
TSC1-207ENST00000493467 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
TSC1-207ENST00000493467 TNRQ92752 1358 aa12.02□□□□□ -0.48
TSC1-207ENST00000493467 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.48
TSC1-207ENST00000493467 HSP90AB1P08238 724 aaKnown RBP12.02□□□□□ -0.48
TSC1-207ENST00000493467 FNBP4Q8N3X1 1017 aaPredicted RBP12.02□□□□□ -0.48
TSC1-207ENST00000493467 TTC21BQ7Z4L5 1316 aa12.02□□□□□ -0.49
TSC1-207ENST00000493467 USP6P35125 1406 aa12.02□□□□□ -0.49
TSC1-207ENST00000493467 K7ELQ4 463 aaPredicted RBP12.02□□□□□ -0.49
TSC1-207ENST00000493467 XRCC6P12956 609 aaKnown RBP eCLIP12.02□□□□□ -0.49
TSC1-207ENST00000493467 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.49
TSC1-207ENST00000493467 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
TSC1-207ENST00000493467 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.49
TSC1-207ENST00000493467 PTPRCP08575 1304 aa12.02□□□□□ -0.49
TSC1-207ENST00000493467 ARHGEF10O15013 1369 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 LRRC37A3O60309 1634 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 SSH2Q76I76 1423 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
TSC1-207ENST00000493467 CHL1O00533 1208 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 GPR37O15354 613 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 GSPT1P15170 499 aaKnown RBP12.01□□□□□ -0.49
TSC1-207ENST00000493467 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 GBP4Q96PP9 640 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 CRB1P82279 1406 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
TSC1-207ENST00000493467 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
TSC1-207ENST00000493467 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
TSC1-207ENST00000493467 SERPINA10Q9UK55 444 aa12.01□□□□□ -0.49
TSC1-207ENST00000493467 N4BP2Q86UW6 1770 aaPredicted RBP12□□□□□ -0.49
TSC1-207ENST00000493467 MRE11P49959 708 aa12□□□□□ -0.49
TSC1-207ENST00000493467 TTC22Q5TAA0 569 aa12□□□□□ -0.49
TSC1-207ENST00000493467 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
TSC1-207ENST00000493467 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 MSH6P52701 1360 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 SKOR2Q2VWA4 1001 aaPredicted RBP11.99□□□□□ -0.49
TSC1-207ENST00000493467 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
TSC1-207ENST00000493467 CD2BP2O95400 341 aaKnown RBP11.98□□□□□ -0.49
TSC1-207ENST00000493467 MFSD10Q14728 455 aa11.98□□□□□ -0.49
TSC1-207ENST00000493467 SULT6B1Q6IMI4 303 aa11.98□□□□□ -0.49
TSC1-207ENST00000493467 CEP85Q6P2H3 762 aa11.98□□□□□ -0.49
TSC1-207ENST00000493467 FAM208AQ9UK61 1670 aaKnown RBP11.98□□□□□ -0.49
TSC1-207ENST00000493467 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
TSC1-207ENST00000493467 RABEP1Q15276 862 aa11.98□□□□□ -0.49
TSC1-207ENST00000493467 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
TSC1-207ENST00000493467 TUBGCP6Q96RT7 1819 aa11.97□□□□□ -0.49
TSC1-207ENST00000493467 ACEP12821 1306 aa11.97□□□□□ -0.49
TSC1-207ENST00000493467 MLECQ14165 292 aa11.97□□□□□ -0.49
TSC1-207ENST00000493467 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
TSC1-207ENST00000493467 KDRP35968 1356 aa11.97□□□□□ -0.49
TSC1-207ENST00000493467 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
TSC1-207ENST00000493467 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
TSC1-207ENST00000493467 GOPCQ9HD26 462 aa11.96□□□□□ -0.49
TSC1-207ENST00000493467 DSG3P32926 999 aa11.96□□□□□ -0.49
TSC1-207ENST00000493467 CAMK2BQ13554 666 aa11.96□□□□□ -0.49
TSC1-207ENST00000493467 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
TSC1-207ENST00000493467 PTPRUQ92729 1446 aa11.96□□□□□ -0.5
TSC1-207ENST00000493467 DIP2AQ14689 1571 aa11.95□□□□□ -0.5
TSC1-207ENST00000493467 CDK11BP21127 795 aaKnown RBP11.95□□□□□ -0.5
TSC1-207ENST00000493467 GRPEL1Q9HAV7 217 aa11.95□□□□□ -0.5
TSC1-207ENST00000493467 RRAGDQ9NQL2 400 aaPredicted RBP11.95□□□□□ -0.5
TSC1-207ENST00000493467 SBNO1A3KN83 1393 aa11.95□□□□□ -0.5
TSC1-207ENST00000493467 IBTKQ9P2D0 1353 aaPredicted RBP11.95□□□□□ -0.5
TSC1-207ENST00000493467 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
TSC1-207ENST00000493467 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
TSC1-207ENST00000493467 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
TSC1-207ENST00000493467 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
TSC1-207ENST00000493467 FLT4P35916 1363 aa11.94□□□□□ -0.5
TSC1-207ENST00000493467 SLIT1O75093 1534 aa11.94□□□□□ -0.5
TSC1-207ENST00000493467 HSP90AA1P07900 732 aaKnown RBP11.94□□□□□ -0.5
TSC1-207ENST00000493467 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
TSC1-207ENST00000493467 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
TSC1-207ENST00000493467 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
TSC1-207ENST00000493467 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
TSC1-207ENST00000493467 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
TSC1-207ENST00000493467 AMHR2Q16671 573 aa11.93□□□□□ -0.5
TSC1-207ENST00000493467 MCM10Q7L590 875 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms