RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 COG6Q9Y2V7 657 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
NF1-215ENST00000493220 ST5P78524 1137 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 ACSBG1Q96GR2 724 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 CARD10Q9BWT7 1032 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 PRR36Q9H6K5 1346 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 PPP1R1BQ9UD71 204 aaPredicted RBP7.74□□□□□ -1.17
NF1-215ENST00000493220 FBXW7Q969H0 707 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 STK32BQ9NY57 414 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.73□□□□□ -1.17
NF1-215ENST00000493220 UBR1Q8IWV7 1749 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 KIAA0232Q92628 1395 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 MTHFSDQ2M296 383 aaKnown RBP7.73□□□□□ -1.17
NF1-215ENST00000493220 PPP1R42Q7Z4L9 355 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 BAG6P46379 1132 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 CRBNQ96SW2 442 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 CNNM1Q9NRU3 951 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 FAM177BA6PVY3 158 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 IGHMBP2P38935 993 aaKnown RBP7.73□□□□□ -1.17
NF1-215ENST00000493220 CCDC57Q2TAC2 916 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 RUFY2Q8WXA3 655 aa7.73□□□□□ -1.17
NF1-215ENST00000493220 FANCIQ9NVI1 1328 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 ERVV-2B6SEH9 535 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 POLD1P28340 1107 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 RSPH6AQ9H0K4 717 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 PER1O15534 1290 aaPredicted RBP7.72□□□□□ -1.17
NF1-215ENST00000493220 DCTN1Q14203 1278 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 WDR17Q8IZU2 1322 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 ANKRD45Q5TZF3 282 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 ARHGEF25Q86VW2 580 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.72□□□□□ -1.174e-7■■■□□ 15.9
NF1-215ENST00000493220 NYXQ9GZU5 481 aa7.72□□□□□ -1.17
NF1-215ENST00000493220 CDK12Q9NYV4 1490 aaPredicted RBP7.71□□□□□ -1.17
NF1-215ENST00000493220 ATF7IPQ6VMQ6 1270 aa7.71□□□□□ -1.17
NF1-215ENST00000493220 BICDL1Q6ZP65 573 aa7.71□□□□□ -1.17
NF1-215ENST00000493220 CHMP4CQ96CF2 233 aa7.71□□□□□ -1.17
NF1-215ENST00000493220 MPHOSPH8Q99549 860 aa7.71□□□□□ -1.17
NF1-215ENST00000493220 ANO8Q9HCE9 1232 aaPredicted RBP7.71□□□□□ -1.17
NF1-215ENST00000493220 MIS18AQ9NYP9 233 aa7.71□□□□□ -1.17
NF1-215ENST00000493220 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.17
NF1-215ENST00000493220 FBLN1P23142 703 aa7.71□□□□□ -1.18
NF1-215ENST00000493220 RPGRQ92834 1020 aaKnown RBP7.71□□□□□ -1.18
NF1-215ENST00000493220 MED14O60244 1454 aa7.71□□□□□ -1.18
NF1-215ENST00000493220 AEBP1Q8IUX7 1158 aa7.71□□□□□ -1.18
NF1-215ENST00000493220 NCLP19338 710 aaKnown RBP7.71□□□□□ -1.18
NF1-215ENST00000493220 MFAP1P55081 439 aaKnown RBP7.71□□□□□ -1.18
NF1-215ENST00000493220 FAM196AQ6ZSG2 479 aa7.71□□□□□ -1.18
NF1-215ENST00000493220 PTPRUQ92729 1446 aa7.71□□□□□ -1.18
NF1-215ENST00000493220 ADAMTSL3P82987 1691 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 USP31Q70CQ4 1352 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 PLIN1O60240 522 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 MBIPQ9NS73 344 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 ITSN1Q15811 1721 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 CCDC158Q5M9N0 1113 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 CDCA7LQ96GN5 454 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 MYD88Q99836 296 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 NAP1L2Q9ULW6 460 aaPredicted RBP7.7□□□□□ -1.18
NF1-215ENST00000493220 THUMPD2Q9BTF0 503 aaKnown RBP7.7□□□□□ -1.18
NF1-215ENST00000493220 ISY1Q9ULR0 285 aaKnown RBP7.7□□□□□ -1.18
NF1-215ENST00000493220 PHF14O94880 888 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 FLAD1Q8NFF5 587 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 GCC1Q96CN9 775 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 SLC52A2Q9HAB3 445 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 CCNL1Q9UK58 526 aaPredicted RBP7.7□□□□□ -1.18
NF1-215ENST00000493220 TBC1D2BQ9UPU7 963 aa7.7□□□□□ -1.18
NF1-215ENST00000493220 DNAAF4Q8WXU2 420 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 DIAPH3Q9NSV4 1193 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 TTC39AQ5SRH9 613 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 KIF1AQ12756 1690 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 NBPF6Q5VWK0 638 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 NBPF4Q96M43 638 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 CWC25Q9NXE8 425 aaPredicted RBP7.69□□□□□ -1.18
NF1-215ENST00000493220 TFCP2L1Q9NZI6 479 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 PARP3Q9Y6F1 533 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 HOXB7P09629 217 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 CLASRPQ8N2M8 674 aaKnown RBP7.69□□□□□ -1.18
NF1-215ENST00000493220 NEUROD6Q96NK8 337 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 TRMT112Q9UI30 125 aaKnown RBP7.69□□□□□ -1.18
NF1-215ENST00000493220 AFF2P51816 1311 aa7.69□□□□□ -1.18
NF1-215ENST00000493220 HIP1O00291 1037 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 TRAPPC3LQ5T215 181 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 KRT27Q7Z3Y8 459 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 NFATC2IPQ8NCF5 419 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 SETDB2Q96T68 719 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 MVPQ14764 893 aaKnown RBP7.68□□□□□ -1.18
NF1-215ENST00000493220 HSCBQ8IWL3 235 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 PANK1Q8TE04 598 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 AKAP2Q9Y2D5 859 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 CPSF1Q10570 1443 aaKnown RBP7.68□□□□□ -1.18
NF1-215ENST00000493220 GOLGA6L22H0YM25 854 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 ANP32EQ9BTT0 268 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 APBA3O96018 575 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 RILPL2Q969X0 211 aa7.68□□□□□ -1.18
NF1-215ENST00000493220 FAM83GA6ND36 823 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 CCDC184Q52MB2 194 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 EXOC6Q8TAG9 804 aa7.67□□□□□ -1.18
NF1-215ENST00000493220 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.187e-7■■□□□ 11.6
NF1-215ENST00000493220 SURF6O75683 361 aaKnown RBP7.67□□□□□ -1.18
NF1-215ENST00000493220 RBM6P78332 1123 aaKnown RBP7.67□□□□□ -1.18
NF1-215ENST00000493220 CDC5LQ99459 802 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms