RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 IP6K1Q92551 441 aa18.79■□□□□ 0.6
GAPDH-209ENST00000492719 SSFA2P28290 1259 aa18.78■□□□□ 0.6
GAPDH-209ENST00000492719 CTCFP49711 727 aaPredicted RBP18.78■□□□□ 0.6
GAPDH-209ENST00000492719 AIDAQ96BJ3 306 aa18.78■□□□□ 0.6
GAPDH-209ENST00000492719 TMF1P82094 1093 aa18.77■□□□□ 0.6
GAPDH-209ENST00000492719 C4AP0C0L4 1744 aa18.77■□□□□ 0.59
GAPDH-209ENST00000492719 LBX1P52954 281 aa18.76■□□□□ 0.59
GAPDH-209ENST00000492719 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
GAPDH-209ENST00000492719 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
GAPDH-209ENST00000492719 TIAM2Q8IVF5 1701 aa18.75■□□□□ 0.59
GAPDH-209ENST00000492719 MAP2P11137 1827 aaKnown RBP18.75■□□□□ 0.59
GAPDH-209ENST00000492719 HMGB2P26583 209 aaKnown RBP18.75■□□□□ 0.59
GAPDH-209ENST00000492719 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
GAPDH-209ENST00000492719 FYB1O15117 783 aa18.74■□□□□ 0.59
GAPDH-209ENST00000492719 GNPATO15228 680 aa18.74■□□□□ 0.59
GAPDH-209ENST00000492719 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
GAPDH-209ENST00000492719 LINC00116Q8NCU8 138 aa18.74■□□□□ 0.59
GAPDH-209ENST00000492719 COG3Q96JB2 828 aa18.74■□□□□ 0.59
GAPDH-209ENST00000492719 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
GAPDH-209ENST00000492719 DCAF5Q96JK2 942 aa18.73■□□□□ 0.59
GAPDH-209ENST00000492719 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
GAPDH-209ENST00000492719 KCNA3P22001 575 aa18.72■□□□□ 0.59
GAPDH-209ENST00000492719 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
GAPDH-209ENST00000492719 CCDC87Q9NVE4 849 aa18.72■□□□□ 0.59
GAPDH-209ENST00000492719 HOXC9P31274 260 aa18.71■□□□□ 0.59
GAPDH-209ENST00000492719 RASSF7Q02833 373 aa18.71■□□□□ 0.59
GAPDH-209ENST00000492719 VIRMAQ69YN4 1812 aaKnown RBP18.71■□□□□ 0.59
GAPDH-209ENST00000492719 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
GAPDH-209ENST00000492719 PIM2Q9P1W9 311 aa18.7■□□□□ 0.58
GAPDH-209ENST00000492719 TNRC18O15417 2968 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-209ENST00000492719 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
GAPDH-209ENST00000492719 FBLN1P23142 703 aa18.69■□□□□ 0.58
GAPDH-209ENST00000492719 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-209ENST00000492719 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
GAPDH-209ENST00000492719 RGS19P49795 217 aa18.67■□□□□ 0.58
GAPDH-209ENST00000492719 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
GAPDH-209ENST00000492719 CARD14Q9BXL6 1004 aa18.67■□□□□ 0.58
GAPDH-209ENST00000492719 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
GAPDH-209ENST00000492719 AMPHP49418 695 aa18.66■□□□□ 0.58
GAPDH-209ENST00000492719 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
GAPDH-209ENST00000492719 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
GAPDH-209ENST00000492719 HSPA8P11142 646 aaKnown RBP18.65■□□□□ 0.58
GAPDH-209ENST00000492719 SIK1P57059 783 aa18.65■□□□□ 0.58
GAPDH-209ENST00000492719 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
GAPDH-209ENST00000492719 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
GAPDH-209ENST00000492719 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
GAPDH-209ENST00000492719 VEGFBP49765 207 aa18.64■□□□□ 0.57
GAPDH-209ENST00000492719 ITPK1Q13572 414 aa18.64■□□□□ 0.57
GAPDH-209ENST00000492719 NLGN1Q8N2Q7 840 aa18.64■□□□□ 0.57
GAPDH-209ENST00000492719 CHRNA5P30532 468 aa18.63■□□□□ 0.57
GAPDH-209ENST00000492719 RRS1Q15050 365 aaKnown RBP18.63■□□□□ 0.57
GAPDH-209ENST00000492719 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
GAPDH-209ENST00000492719 WBP1LQ9NX94 342 aa18.63■□□□□ 0.57
GAPDH-209ENST00000492719 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
GAPDH-209ENST00000492719 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
GAPDH-209ENST00000492719 KIF24Q5T7B8 1368 aa18.63■□□□□ 0.57
GAPDH-209ENST00000492719 KDM6AO15550 1401 aaPredicted RBP18.63■□□□□ 0.57
GAPDH-209ENST00000492719 POTECB2RU33 542 aa18.62■□□□□ 0.57
GAPDH-209ENST00000492719 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
GAPDH-209ENST00000492719 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
GAPDH-209ENST00000492719 PIGBQ92521 554 aa18.62■□□□□ 0.57
GAPDH-209ENST00000492719 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
GAPDH-209ENST00000492719 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
GAPDH-209ENST00000492719 INSRP06213 1382 aa18.6■□□□□ 0.57
GAPDH-209ENST00000492719 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
GAPDH-209ENST00000492719 TATP17735 454 aaPredicted RBP18.6■□□□□ 0.57
GAPDH-209ENST00000492719 LMNB1P20700 586 aa18.6■□□□□ 0.57
GAPDH-209ENST00000492719 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
GAPDH-209ENST00000492719 TRAPPC3LQ5T215 181 aa18.6■□□□□ 0.57
GAPDH-209ENST00000492719 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
GAPDH-209ENST00000492719 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
GAPDH-209ENST00000492719 GYS1P13807 737 aa18.59■□□□□ 0.57
GAPDH-209ENST00000492719 CYP27B1O15528 508 aa18.58■□□□□ 0.56
GAPDH-209ENST00000492719 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.56
GAPDH-209ENST00000492719 RTCBQ9Y3I0 505 aaKnown RBP18.58■□□□□ 0.56
GAPDH-209ENST00000492719 FLT4P35916 1363 aa18.56■□□□□ 0.56
GAPDH-209ENST00000492719 ARHGEF1Q92888 912 aaKnown RBP18.56■□□□□ 0.56
GAPDH-209ENST00000492719 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
GAPDH-209ENST00000492719 ASAP1Q9ULH1 1129 aa18.55■□□□□ 0.56
GAPDH-209ENST00000492719 COL5A3P25940 1745 aaPredicted RBP18.54■□□□□ 0.56
GAPDH-209ENST00000492719 RFC4P35249 363 aa18.54■□□□□ 0.56
GAPDH-209ENST00000492719 MYH14Q7Z406 1995 aaKnown RBP18.53■□□□□ 0.56
GAPDH-209ENST00000492719 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
GAPDH-209ENST00000492719 DLEC1Q9Y238 1755 aa18.53■□□□□ 0.56
GAPDH-209ENST00000492719 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
GAPDH-209ENST00000492719 NCAPD2Q15021 1401 aa18.52■□□□□ 0.56
GAPDH-209ENST00000492719 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.56
GAPDH-209ENST00000492719 DDR1Q08345 913 aa18.52■□□□□ 0.56
GAPDH-209ENST00000492719 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.56
GAPDH-209ENST00000492719 PASKQ96RG2 1323 aa18.51■□□□□ 0.55
GAPDH-209ENST00000492719 TMEM88BA6NKF7 163 aa18.51■□□□□ 0.55
GAPDH-209ENST00000492719 DPY19L2Q6NUT2 758 aa18.51■□□□□ 0.55
GAPDH-209ENST00000492719 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
GAPDH-209ENST00000492719 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
GAPDH-209ENST00000492719 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
GAPDH-209ENST00000492719 CASP8AP2Q9UKL3 1982 aa18.5■□□□□ 0.55
GAPDH-209ENST00000492719 ADRA2BP18089 450 aa18.49■□□□□ 0.55
GAPDH-209ENST00000492719 POLKQ9UBT6 870 aa18.49■□□□□ 0.55
GAPDH-209ENST00000492719 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
GAPDH-209ENST00000492719 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms