RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 GRXCR2A6NFK2 248 aa6.7□□□□□ -1.34
UBR4-215ENST00000492606 C9orf131Q5VYM1 1079 aa6.7□□□□□ -1.34
UBR4-215ENST00000492606 PTCD2Q8WV60 388 aaKnown RBP6.7□□□□□ -1.34
UBR4-215ENST00000492606 SLC39A7Q92504 469 aa6.7□□□□□ -1.34
UBR4-215ENST00000492606 CCDC141Q6ZP82 1450 aa6.7□□□□□ -1.34
UBR4-215ENST00000492606 KIF15Q9NS87 1388 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 CACNA1GO43497 2377 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 CCDC144AA2RUR9 1427 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 C11orf95C9JLR9 678 aaPredicted RBP6.69□□□□□ -1.34
UBR4-215ENST00000492606 C7P10643 843 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 FECHP22830 423 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 LRRC4BQ9NT99 713 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 MKI67P46013 3256 aaKnown RBP6.69□□□□□ -1.34
UBR4-215ENST00000492606 UNC79Q9P2D8 2635 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
UBR4-215ENST00000492606 SEC24BO95487 1268 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 MAP2K1Q02750 393 aaPredicted RBP6.68□□□□□ -1.34
UBR4-215ENST00000492606 PDE4DQ08499 809 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 FAM122AQ96E09 287 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 DCBLD2Q96PD2 775 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 METRNQ9UJH8 293 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 CCNB3Q8WWL7 1395 aa6.68□□□□□ -1.34
UBR4-215ENST00000492606 LTBP1Q14766 1721 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 EVI5O60447 810 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 ARHGAP27Q6ZUM4 889 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 KRI1Q8N9T8 703 aaKnown RBP6.67□□□□□ -1.34
UBR4-215ENST00000492606 DDX12PQ92771 950 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 KDM4CQ9H3R0 1056 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 PLEKHG2Q9H7P9 1386 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 CEP290O15078 2479 aa6.67□□□□□ -1.34
UBR4-215ENST00000492606 G3V3G9 751 aa6.66□□□□□ -1.34
UBR4-215ENST00000492606 POTEHQ6S545 545 aa6.66□□□□□ -1.34
UBR4-215ENST00000492606 TCP11L2Q8N4U5 519 aa6.66□□□□□ -1.34
UBR4-215ENST00000492606 MARCH10Q8NA82 808 aaPredicted RBP6.66□□□□□ -1.34
UBR4-215ENST00000492606 MINK1Q8N4C8 1332 aaPredicted RBP6.66□□□□□ -1.34
UBR4-215ENST00000492606 IRF6O14896 467 aa6.65□□□□□ -1.34
UBR4-215ENST00000492606 CHRNA2Q15822 529 aa6.65□□□□□ -1.34
UBR4-215ENST00000492606 LARP1Q6PKG0 1096 aaKnown RBP6.65□□□□□ -1.34
UBR4-215ENST00000492606 PRDM11Q9NQV5 511 aa6.65□□□□□ -1.34
UBR4-215ENST00000492606 NPDC1Q9NQX5 325 aaPredicted RBP6.65□□□□□ -1.34
UBR4-215ENST00000492606 CDC42BPGQ6DT37 1551 aa6.65□□□□□ -1.35
UBR4-215ENST00000492606 LRRC37A3O60309 1634 aa6.65□□□□□ -1.35
UBR4-215ENST00000492606 CRYBG1Q9Y4K1 1723 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 RANBP2P49792 3224 aaKnown RBP6.64□□□□□ -1.35
UBR4-215ENST00000492606 VEGFAP15692 232 aaPredicted RBP6.64□□□□□ -1.35
UBR4-215ENST00000492606 MAP2K5Q13163 448 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 PTGDRQ13258 359 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 CCDC102AQ96A19 550 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 WDR33Q9C0J8 1336 aaKnown RBP6.64□□□□□ -1.35
UBR4-215ENST00000492606 SBNO1A3KN83 1393 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 ARHGEF10O15013 1369 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 SSH2Q76I76 1423 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 CCDC18Q5T9S5 1454 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 TTC28Q96AY4 2481 aa6.64□□□□□ -1.35
UBR4-215ENST00000492606 POTECB2RU33 542 aa6.63□□□□□ -1.35
UBR4-215ENST00000492606 SUPT5HO00267 1087 aaKnown RBP6.63□□□□□ -1.35
UBR4-215ENST00000492606 GNPATO15228 680 aa6.63□□□□□ -1.35
UBR4-215ENST00000492606 POTEJP0CG39 1038 aa6.63□□□□□ -1.35
UBR4-215ENST00000492606 KIF1AQ12756 1690 aa6.63□□□□□ -1.35
UBR4-215ENST00000492606 IL27Q8NEV9 243 aa6.63□□□□□ -1.35
UBR4-215ENST00000492606 PIEZO1Q92508 2521 aa6.63□□□□□ -1.35
UBR4-215ENST00000492606 LAMB4A4D0S4 1761 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 KIAA1551Q9HCM1 1747 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 BCL9O00512 1426 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 PASKQ96RG2 1323 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 PLEKHG3A1L390 1219 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 TBC1D12O60347 775 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 PSME1Q06323 249 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 HIC1Q14526 733 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 AMHR2Q16671 573 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
UBR4-215ENST00000492606 FAM117AQ9C073 453 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 TFCP2L1Q9NZI6 479 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 BRCA2P51587 3418 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 SBF1O95248 1867 aa6.62□□□□□ -1.35
UBR4-215ENST00000492606 RGPD8O14715 1765 aaPredicted RBP6.62□□□□□ -1.35
UBR4-215ENST00000492606 RASSF10A6NK89 507 aa6.61□□□□□ -1.35
UBR4-215ENST00000492606 FCHSD2O94868 740 aa6.61□□□□□ -1.35
UBR4-215ENST00000492606 COL26A1Q96A83 441 aa6.61□□□□□ -1.35
UBR4-215ENST00000492606 CDHR5Q9HBB8 845 aa6.61□□□□□ -1.35
UBR4-215ENST00000492606 BCS1LQ9Y276 419 aa6.61□□□□□ -1.35
UBR4-215ENST00000492606 KNDC1Q76NI1 1749 aa6.61□□□□□ -1.35
UBR4-215ENST00000492606 KIAA0232Q92628 1395 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 AKAP12Q02952 1782 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 N4BP2Q86UW6 1770 aaPredicted RBP6.6□□□□□ -1.35
UBR4-215ENST00000492606 PRR36Q9H6K5 1346 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 DEFB115Q30KQ5 88 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 PARP9Q8IXQ6 854 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 REPIN1Q9BWE0 567 aaKnown RBP6.6□□□□□ -1.35
UBR4-215ENST00000492606 RNF181Q9P0P0 153 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 PCDHGA10Q9Y5H3 936 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 QRICH2Q9H0J4 1663 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 BAHCC1Q9P281 2608 aa6.6□□□□□ -1.35
UBR4-215ENST00000492606 BRD4O60885 1362 aaPredicted RBP6.59□□□□□ -1.35
UBR4-215ENST00000492606 TMEM88BA6NKF7 163 aa6.59□□□□□ -1.35
UBR4-215ENST00000492606 POTEB2H3BUK9 544 aa6.59□□□□□ -1.35
UBR4-215ENST00000492606 KCNQ4P56696 695 aa6.59□□□□□ -1.35
UBR4-215ENST00000492606 EVA1CP58658 441 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms