RNA–Protein interactions for RNA: ENST00000491383.5

KDM3A-214, Transcript of lysine demethylase 3A, humanhuman

TSL 1 (best)

Gene KDM3A, Length 4,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-214ENST00000491383 PTPN14Q15678 1187 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 TICAM2Q86XR7 235 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 IPO4Q8TEX9 1081 aaKnown RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 ADCY5O95622 1261 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 WWC1Q8IX03 1113 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 NECTIN2Q92692 538 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 CHMP4CQ96CF2 233 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 SIRT1Q96EB6 747 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 ABCC11Q96J66 1382 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 SBNO2Q9Y2G9 1366 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 ERC2O15083 957 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 CT47B1P0C2W7 299 aaPredicted RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 CCDC183Q5T5S1 534 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 TEX2Q8IWB9 1127 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 WDR63Q8IWG1 891 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 FBXW7Q969H0 707 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 OGFRQ9NZT2 677 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 NPHP4O75161 1426 aaPredicted RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 GTF2A1P52655 376 aaPredicted RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 EXOSC9Q06265 439 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 BMS1Q14692 1282 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 ATF7IPQ6VMQ6 1270 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 KIF18AQ8NI77 898 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 TNMDQ9H2S6 317 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 TERF2IPQ9NYB0 399 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 RBM27Q9P2N5 1060 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 NOB1Q9ULX3 412 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 EVC2Q86UK5 1308 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 EIF3JO75822 258 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 TSR1Q2NL82 804 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 GPATCH11Q8N954 259 aa6.16□□□□□ -1.42
KDM3A-214ENST00000491383 C16orf45Q96MC5 204 aaPredicted RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 PUS7Q96PZ0 661 aaKnown RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 ZNF692Q9BU19 519 aaPredicted RBP6.16□□□□□ -1.42
KDM3A-214ENST00000491383 NRXN3Q9Y4C0 1643 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 CREBRFQ8IUR6 639 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 SNX21Q969T3 373 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 RNF216Q9NWF9 866 aaPredicted RBP6.15□□□□□ -1.42
KDM3A-214ENST00000491383 PAXBP1Q9Y5B6 917 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 ADAMTS13Q76LX8 1427 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 VGLL3A8MV65 326 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 POLR3GO15318 223 aaPredicted RBP6.15□□□□□ -1.42
KDM3A-214ENST00000491383 PRIM1P49642 420 aaKnown RBP6.15□□□□□ -1.42
KDM3A-214ENST00000491383 RAB3GAP1Q15042 981 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 KNDC1Q76NI1 1749 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 FILIP1Q7Z7B0 1213 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 ZNF830Q96NB3 372 aaPredicted RBP6.15□□□□□ -1.42
KDM3A-214ENST00000491383 RUFY1Q96T51 708 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 SDF4Q9BRK5 362 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 HDAC5Q9UQL6 1122 aa6.15□□□□□ -1.42
KDM3A-214ENST00000491383 NKTRP30414 1462 aaKnown RBP6.15□□□□□ -1.42
KDM3A-214ENST00000491383 FAM135BQ49AJ0 1406 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 SMC2O95347 1197 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 SEC24BO95487 1268 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 PDCP20941 246 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 SLC26A8Q96RN1 970 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 QRICH2Q9H0J4 1663 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 ASXL1Q8IXJ9 1541 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 MED14O60244 1454 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 SETD1AO15047 1707 aaKnown RBP6.15□□□□□ -1.43
KDM3A-214ENST00000491383 ARHGEF28Q8N1W1 1705 aaKnown RBP6.15□□□□□ -1.43
KDM3A-214ENST00000491383 ERLIN1O75477 346 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 SMC5Q8IY18 1101 aa6.15□□□□□ -1.43
KDM3A-214ENST00000491383 RARSP54136 660 aaKnown RBP6.14□□□□□ -1.43
KDM3A-214ENST00000491383 HSP90AB3PQ58FF7 597 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 UTP14CQ5TAP6 766 aaKnown RBP6.14□□□□□ -1.43
KDM3A-214ENST00000491383 MYRIPQ8NFW9 859 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 PRAM1Q96QH2 718 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 C1orf115Q9H7X2 142 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 KINO60870 393 aaKnown RBP6.14□□□□□ -1.43
KDM3A-214ENST00000491383 KRT85P78386 507 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 DMTNQ08495 405 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 TESK2Q96S53 571 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 METP08581 1390 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 TECPR2O15040 1411 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 NCKAP5LQ9HCH0 1330 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 FSD2A1L4K1 749 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 TXLNBQ8N3L3 684 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 CPS1P31327 1500 aa6.14□□□□□ -1.43
KDM3A-214ENST00000491383 GABPB1Q06547 395 aaPredicted RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 TRIM34Q9BYJ4 488 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 PRDM16Q9HAZ2 1276 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 KIAA0754O94854 1291 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 GNAI1P63096 354 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 PDILTQ8N807 584 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 GIMAP7Q8NHV1 300 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 TSR2Q969E8 191 aaKnown RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 TTC12Q9H892 705 aaPredicted RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 AMOTL2Q9Y2J4 779 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 DMRT2Q9Y5R5 561 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 IPO7O95373 1038 aaKnown RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 AXDND1Q5T1B0 1012 aaPredicted RBP6.13□□□□□ -1.43
KDM3A-214ENST00000491383 CTR9Q6PD62 1173 aa6.13□□□□□ -1.43
KDM3A-214ENST00000491383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.13□□□□□ -1.432e-6■■□□□ 12.5
KDM3A-214ENST00000491383 PTCH1Q13635 1447 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms