RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 MYH16Q9H6N6 1097 aa11.67□□□□□ -0.54
PGK1-205ENST00000491291 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
PGK1-205ENST00000491291 SPINK5Q9NQ38 1064 aaPredicted RBP11.67□□□□□ -0.54
PGK1-205ENST00000491291 RGS12O14924 1447 aa11.67□□□□□ -0.54
PGK1-205ENST00000491291 PAPPAQ13219 1627 aa11.67□□□□□ -0.54
PGK1-205ENST00000491291 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
PGK1-205ENST00000491291 ERVV-2B6SEH9 535 aa11.66□□□□□ -0.54
PGK1-205ENST00000491291 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
PGK1-205ENST00000491291 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.54
PGK1-205ENST00000491291 UBR2Q8IWV8 1755 aa11.65□□□□□ -0.54
PGK1-205ENST00000491291 CENPBP07199 599 aaPredicted RBP11.65□□□□□ -0.54
PGK1-205ENST00000491291 KRT27Q7Z3Y8 459 aa11.65□□□□□ -0.54
PGK1-205ENST00000491291 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
PGK1-205ENST00000491291 MBIPQ9NS73 344 aa11.65□□□□□ -0.54
PGK1-205ENST00000491291 BABAM1Q9NWV8 329 aa11.65□□□□□ -0.54
PGK1-205ENST00000491291 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
PGK1-205ENST00000491291 BCL9O00512 1426 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 CHL1O00533 1208 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
PGK1-205ENST00000491291 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 TMOD3Q9NYL9 352 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 BTAF1O14981 1849 aa11.64□□□□□ -0.55
PGK1-205ENST00000491291 FAM182BQ5T319 152 aa11.63□□□□□ -0.55
PGK1-205ENST00000491291 SYTL4Q96C24 671 aaPredicted RBP11.63□□□□□ -0.55
PGK1-205ENST00000491291 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
PGK1-205ENST00000491291 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
PGK1-205ENST00000491291 C5P01031 1676 aa11.62□□□□□ -0.55
PGK1-205ENST00000491291 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
PGK1-205ENST00000491291 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
PGK1-205ENST00000491291 TTC5Q8N0Z6 440 aa11.61□□□□□ -0.55
PGK1-205ENST00000491291 PIGBQ92521 554 aa11.61□□□□□ -0.55
PGK1-205ENST00000491291 LAMB4A4D0S4 1761 aa11.61□□□□□ -0.55
PGK1-205ENST00000491291 KCNQ3O43525 872 aa11.6□□□□□ -0.55
PGK1-205ENST00000491291 SLC39A6Q13433 755 aa11.6□□□□□ -0.55
PGK1-205ENST00000491291 ZNF790Q6PG37 636 aa11.6□□□□□ -0.55
PGK1-205ENST00000491291 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
PGK1-205ENST00000491291 KCNQ2O43526 872 aa11.59□□□□□ -0.55
PGK1-205ENST00000491291 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
PGK1-205ENST00000491291 KCPQ6ZWJ8 1503 aa11.59□□□□□ -0.55
PGK1-205ENST00000491291 LY75O60449 1722 aa11.58□□□□□ -0.56
PGK1-205ENST00000491291 TWISTNBQ3B726 338 aaPredicted RBP11.58□□□□□ -0.56
PGK1-205ENST00000491291 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
PGK1-205ENST00000491291 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
PGK1-205ENST00000491291 ATG3Q9NT62 314 aa11.58□□□□□ -0.56
PGK1-205ENST00000491291 ASAP1Q9ULH1 1129 aa11.58□□□□□ -0.56
PGK1-205ENST00000491291 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
PGK1-205ENST00000491291 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
PGK1-205ENST00000491291 ELL2O00472 640 aaPredicted RBP11.57□□□□□ -0.56
PGK1-205ENST00000491291 CT47B1P0C2W7 299 aaPredicted RBP11.57□□□□□ -0.56
PGK1-205ENST00000491291 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
PGK1-205ENST00000491291 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
PGK1-205ENST00000491291 TJP1Q07157 1748 aa11.57□□□□□ -0.56
PGK1-205ENST00000491291 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
PGK1-205ENST00000491291 HEG1Q9ULI3 1381 aa11.56□□□□□ -0.56
PGK1-205ENST00000491291 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
PGK1-205ENST00000491291 ZNF496Q96IT1 587 aaPredicted RBP11.56□□□□□ -0.56
PGK1-205ENST00000491291 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
PGK1-205ENST00000491291 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
PGK1-205ENST00000491291 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
PGK1-205ENST00000491291 VAMP4O75379 141 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 TRIM37O94972 964 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 HOXB7P09629 217 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 PTF1AQ7RTS3 328 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
PGK1-205ENST00000491291 RCAN3Q9UKA8 241 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 TAF1LQ8IZX4 1826 aa11.55□□□□□ -0.56
PGK1-205ENST00000491291 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
PGK1-205ENST00000491291 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
PGK1-205ENST00000491291 COL5A3P25940 1745 aaPredicted RBP11.54□□□□□ -0.56
PGK1-205ENST00000491291 RGPD3A6NKT7 1758 aaPredicted RBP11.54□□□□□ -0.56
PGK1-205ENST00000491291 RGPD4Q7Z3J3 1758 aa11.54□□□□□ -0.56
PGK1-205ENST00000491291 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
PGK1-205ENST00000491291 ZNF428Q96B54 188 aa11.53□□□□□ -0.56
PGK1-205ENST00000491291 CHMP4AQ9BY43 222 aa11.53□□□□□ -0.56
PGK1-205ENST00000491291 LOC102724428A0A0B4J2F2 783 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
PGK1-205ENST00000491291 RARSP54136 660 aaKnown RBP11.52□□□□□ -0.57
PGK1-205ENST00000491291 SIK1P57059 783 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 HDGFL1Q5TGJ6 251 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 CCDC30Q5VVM6 783 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
PGK1-205ENST00000491291 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
PGK1-205ENST00000491291 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
PGK1-205ENST00000491291 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
PGK1-205ENST00000491291 SMC4Q9NTJ3 1288 aa11.51□□□□□ -0.57
PGK1-205ENST00000491291 RREB1Q92766 1687 aa11.5□□□□□ -0.57
PGK1-205ENST00000491291 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
PGK1-205ENST00000491291 DNAJC10Q8IXB1 793 aa11.5□□□□□ -0.57
PGK1-205ENST00000491291 SSH1Q8WYL5 1049 aa11.5□□□□□ -0.57
PGK1-205ENST00000491291 BCL2L13Q9BXK5 485 aa11.5□□□□□ -0.57
PGK1-205ENST00000491291 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
PGK1-205ENST00000491291 MYH14Q7Z406 1995 aaKnown RBP11.49□□□□□ -0.57
PGK1-205ENST00000491291 BCAR3O75815 825 aa11.49□□□□□ -0.57
PGK1-205ENST00000491291 STARD3NLO95772 234 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms