RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	ANKLE2	Q86XL3	938 aa		7.94	□□□□□ -1.14
FN1-223	ENST00000490833	KCNH5	Q8NCM2	988 aa		7.94	□□□□□ -1.14
FN1-223	ENST00000490833	NGDN	Q8NEJ9	315 aa	Known RBP	7.94	□□□□□ -1.14
FN1-223	ENST00000490833	ACE	P12821	1306 aa		7.94	□□□□□ -1.14
FN1-223	ENST00000490833	USP6	P35125	1406 aa		7.94	□□□□□ -1.14
FN1-223	ENST00000490833	ADAMTS13	Q76LX8	1427 aa		7.94	□□□□□ -1.14
FN1-223	ENST00000490833	UBR1	Q8IWV7	1749 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	PDZRN3	Q9UPQ7	1066 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	KIF13A	Q9H1H9	1805 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	SBNO1	A3KN83	1393 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	FLT4	P35916	1363 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	PTPRU	Q92729	1446 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	LRRC7	Q96NW7	1537 aa		7.93	□□□□□ -1.14
FN1-223	ENST00000490833	C2orf72	A6NCS6	295 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	CHL1	O00533	1208 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	NUCB1	Q02818	461 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	NME9	Q86XW9	330 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	MRPL50	Q8N5N7	158 aa	Known RBP	7.92	□□□□□ -1.14
FN1-223	ENST00000490833	TSR2	Q969E8	191 aa	Known RBP	7.92	□□□□□ -1.14
FN1-223	ENST00000490833	HCST	Q9UBK5	93 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	PCDHB15	Q9Y5E8	787 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	ROBO2	Q9HCK4	1378 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	NRXN3	Q9Y4C0	1643 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	MON2	Q7Z3U7	1717 aa		7.92	□□□□□ -1.14
FN1-223	ENST00000490833	ZBTB7B	O15156	539 aa	Predicted RBP	7.91	□□□□□ -1.14
FN1-223	ENST00000490833	RGL2	O15211	777 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	NUDT7	P0C024	238 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	AMPH	P49418	695 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	CCT4	P50991	539 aa	Known RBP	7.91	□□□□□ -1.14
FN1-223	ENST00000490833	LSM11	P83369	360 aa	Known RBP eCLIP	7.91	□□□□□ -1.14
FN1-223	ENST00000490833	BMP2KL	Q5H9B9	411 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	INTS3	Q68E01	1043 aa	Known RBP	7.91	□□□□□ -1.14
FN1-223	ENST00000490833	CHD1L	Q86WJ1	897 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	TMC2	Q8TDI7	906 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	STK31	Q9BXU1	1019 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	LAS1L	Q9Y4W2	734 aa	Known RBP	7.91	□□□□□ -1.14
FN1-223	ENST00000490833	EMILIN1	Q9Y6C2	1016 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	ITSN1	Q15811	1721 aa		7.91	□□□□□ -1.14
FN1-223	ENST00000490833	MAP2	P11137	1827 aa	Known RBP	7.9	□□□□□ -1.14
FN1-223	ENST00000490833	AKAP12	Q02952	1782 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	OVOS2	A0A0J9YW53	1432 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	OVOS2	Q6IE36	1432 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	SSH2	Q76I76	1423 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	PLEKHG2	Q9H7P9	1386 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	ABCC4	O15439	1325 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	HOXB7	P09629	217 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	RLBP1	P12271	317 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	LTK	P29376	864 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	EIF4A2	Q14240	407 aa	Known RBP	7.9	□□□□□ -1.14
FN1-223	ENST00000490833	SULT6B1	Q6IMI4	303 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	TMEM57	Q8N5G2	664 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	TBC1D32	Q96NH3	1257 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	MBIP	Q9NS73	344 aa		7.9	□□□□□ -1.14
FN1-223	ENST00000490833	KDR	P35968	1356 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	KDM4F	A0A1W2PPD8	638 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	GNAI3	P08754	354 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	HMOX1	P09601	288 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	CCDC30	Q5VVM6	783 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	PHACTR3	Q96KR7	559 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	C3	P01024	1663 aa		7.89	□□□□□ -1.15
FN1-223	ENST00000490833	ADGRL3	Q9HAR2	1447 aa		7.88	□□□□□ -1.15
FN1-223	ENST00000490833	EPB41L2	O43491	1005 aa	Known RBP	7.88	□□□□□ -1.15
FN1-223	ENST00000490833	AMOT	Q4VCS5	1084 aa		7.88	□□□□□ -1.15
FN1-223	ENST00000490833	BCL2L13	Q9BXK5	485 aa		7.88	□□□□□ -1.15
FN1-223	ENST00000490833	C22orf23	Q9BZE7	217 aa		7.88	□□□□□ -1.15
FN1-223	ENST00000490833	IGSF1	Q8N6C5	1336 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	PRR36	Q9H6K5	1346 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	GNAT3	A8MTJ3	354 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	RBM25	P49756	843 aa	Known RBP	7.87	□□□□□ -1.15
FN1-223	ENST00000490833	RRS1	Q15050	365 aa	Known RBP	7.87	□□□□□ -1.15
FN1-223	ENST00000490833	HSCB	Q8IWL3	235 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	SNX21	Q969T3	373 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	SRCIN1	Q9C0H9	1055 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	DCTPP1	Q9H773	170 aa		7.87	□□□□□ -1.15
FN1-223	ENST00000490833	ISY1	Q9ULR0	285 aa	Known RBP	7.87	□□□□□ -1.15
FN1-223	ENST00000490833	NRK	Q7Z2Y5	1582 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	KIF3C	O14782	793 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	NBR1	Q14596	966 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	TAF7	Q15545	349 aa	Predicted RBP	7.86	□□□□□ -1.15
FN1-223	ENST00000490833	HSP90AB4P	Q58FF6	505 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	ANKRD45	Q5TZF3	282 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	ABTB2	Q8N961	1025 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	SLC26A8	Q96RN1	970 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	PCDHGA4	Q9Y5G9	962 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	SETD1B	Q9UPS6	1966 aa	Known RBP	7.86	□□□□□ -1.15
FN1-223	ENST00000490833	NCOA3	Q9Y6Q9	1424 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	TOPAZ1	Q8N9V7	1692 aa		7.86	□□□□□ -1.15
FN1-223	ENST00000490833	REC8	O95072	547 aa		7.85	□□□□□ -1.15
FN1-223	ENST00000490833	DEK	P35659	375 aa	Known RBP	7.85	□□□□□ -1.15
FN1-223	ENST00000490833	PSME1	Q06323	249 aa		7.85	□□□□□ -1.15
FN1-223	ENST00000490833	ANKRD44	Q8N8A2	993 aa		7.85	□□□□□ -1.15
FN1-223	ENST00000490833	TSPYL4	Q9UJ04	414 aa		7.85	□□□□□ -1.15
FN1-223	ENST00000490833	LHX6	Q9UPM6	363 aa		7.85	□□□□□ -1.15
FN1-223	ENST00000490833	RIMS1	Q86UR5	1692 aa	Known RBP	7.85	□□□□□ -1.15
FN1-223	ENST00000490833	MAP3K19	Q56UN5	1328 aa		7.84	□□□□□ -1.15
FN1-223	ENST00000490833	CDC45	O75419	566 aa		7.84	□□□□□ -1.15
FN1-223	ENST00000490833	GNAI2	P04899	355 aa		7.84	□□□□□ -1.15
FN1-223	ENST00000490833	KCNA6	P17658	529 aa		7.84	□□□□□ -1.15
FN1-223	ENST00000490833	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.84	□□□□□ -1.15
FN1-223	ENST00000490833	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms