RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
PRPF4B-208ENST00000490653 CD163L1Q9NR16 1453 aa10.35□□□□□ -0.75
PRPF4B-208ENST00000490653 HRO43593 1189 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 FBLN1P23142 703 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 YY1P25490 414 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 DSG2Q14126 1118 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 BRD4O60885 1362 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 COL5A2P05997 1499 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 AKAP12Q02952 1782 aa10.34□□□□□ -0.75
PRPF4B-208ENST00000490653 PSEN2P49810 448 aa10.33□□□□□ -0.76
PRPF4B-208ENST00000490653 PPP4R3BQ5MIZ7 849 aa10.33□□□□□ -0.76
PRPF4B-208ENST00000490653 TCP11L2Q8N4U5 519 aa10.33□□□□□ -0.76
PRPF4B-208ENST00000490653 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
PRPF4B-208ENST00000490653 COL18A1P39060 1754 aa10.33□□□□□ -0.76
PRPF4B-208ENST00000490653 SLIT3O75094 1523 aa10.33□□□□□ -0.76
PRPF4B-208ENST00000490653 RGPD5Q99666 1765 aa10.32□□□□□ -0.76
PRPF4B-208ENST00000490653 AATKQ6ZMQ8 1374 aa10.32□□□□□ -0.76
PRPF4B-208ENST00000490653 SBNO2Q9Y2G9 1366 aa10.32□□□□□ -0.76
PRPF4B-208ENST00000490653 TTC21AQ8NDW8 1320 aa10.32□□□□□ -0.76
PRPF4B-208ENST00000490653 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
PRPF4B-208ENST00000490653 KCNQ2O43526 872 aa10.31□□□□□ -0.76
PRPF4B-208ENST00000490653 TBC1D12O60347 775 aa10.31□□□□□ -0.76
PRPF4B-208ENST00000490653 PDE3BQ13370 1112 aa10.31□□□□□ -0.76
PRPF4B-208ENST00000490653 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
PRPF4B-208ENST00000490653 PARP4Q9UKK3 1724 aaKnown RBP10.3□□□□□ -0.76
PRPF4B-208ENST00000490653 LRRC37A3O60309 1634 aa10.3□□□□□ -0.76
PRPF4B-208ENST00000490653 HDGFL2Q7Z4V5 671 aaPredicted RBP10.3□□□□□ -0.76
PRPF4B-208ENST00000490653 MARCH10Q8NA82 808 aaPredicted RBP10.3□□□□□ -0.76
PRPF4B-208ENST00000490653 KCNH5Q8NCM2 988 aa10.3□□□□□ -0.76
PRPF4B-208ENST00000490653 A0A1W2PP64 1363 aa10.29□□□□□ -0.76
PRPF4B-208ENST00000490653 USP31Q70CQ4 1352 aa10.29□□□□□ -0.76
PRPF4B-208ENST00000490653 SPON1Q9HCB6 807 aa10.29□□□□□ -0.76
PRPF4B-208ENST00000490653 NINLQ9Y2I6 1382 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 MON2Q7Z3U7 1717 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 CRB1P82279 1406 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 PLSCR1O15162 318 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 CSB-PGBD3P0DP91 1061 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 PUS7Q96PZ0 661 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 THRAP3Q9Y2W1 955 aaKnown RBP10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 WDR17Q8IZU2 1322 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 NFAT5O94916 1531 aa10.28□□□□□ -0.76
PRPF4B-208ENST00000490653 ZBTB7AO95365 584 aa10.27□□□□□ -0.77
PRPF4B-208ENST00000490653 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
PRPF4B-208ENST00000490653 CARD10Q9BWT7 1032 aa10.27□□□□□ -0.77
PRPF4B-208ENST00000490653 TERF2IPQ9NYB0 399 aa10.27□□□□□ -0.77
PRPF4B-208ENST00000490653 MYOM1P52179 1685 aa10.27□□□□□ -0.77
PRPF4B-208ENST00000490653 USP47Q96K76 1375 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 OVOS2A0A0G2JMS6 1433 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 OVOS2A0A0J9YW53 1432 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 BCL9O00512 1426 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 OVOS2Q6IE36 1432 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 DDB1Q16531 1140 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 NBPF14Q5TI25 921 aa10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
PRPF4B-208ENST00000490653 FYB1O15117 783 aa10.25□□□□□ -0.77
PRPF4B-208ENST00000490653 TMF1P82094 1093 aa10.25□□□□□ -0.77
PRPF4B-208ENST00000490653 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
PRPF4B-208ENST00000490653 ZNF784Q8NCA9 323 aaPredicted RBP10.25□□□□□ -0.77
PRPF4B-208ENST00000490653 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
PRPF4B-208ENST00000490653 GGNBP2Q9H3C7 697 aa10.25□□□□□ -0.77
PRPF4B-208ENST00000490653 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 SBF2Q86WG5 1849 aa10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 ANKRD24Q8TF21 1146 aa10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 NLRP2Q9NX02 1062 aa10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 RGPD3A6NKT7 1758 aaPredicted RBP10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 RGPD4Q7Z3J3 1758 aa10.24□□□□□ -0.77
PRPF4B-208ENST00000490653 EXOC5O00471 708 aa10.23□□□□□ -0.77
PRPF4B-208ENST00000490653 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
PRPF4B-208ENST00000490653 TXNRD1Q16881 649 aa10.23□□□□□ -0.77
PRPF4B-208ENST00000490653 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
PRPF4B-208ENST00000490653 IP6K1Q92551 441 aa10.23□□□□□ -0.77
PRPF4B-208ENST00000490653 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
PRPF4B-208ENST00000490653 COG3Q96JB2 828 aa10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 SYT17Q9BSW7 474 aa10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 PPP1R1BQ9UD71 204 aaPredicted RBP10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 PAPPAQ13219 1627 aa10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 GOLGB1Q14789 3259 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-208ENST00000490653 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.77
PRPF4B-208ENST00000490653 HOXC9P31274 260 aa10.21□□□□□ -0.77
PRPF4B-208ENST00000490653 ACSBG1Q96GR2 724 aa10.21□□□□□ -0.77
PRPF4B-208ENST00000490653 POLR3GLQ9BT43 218 aa10.21□□□□□ -0.77
PRPF4B-208ENST00000490653 RYDENQ9NUL5 291 aaKnown RBP10.21□□□□□ -0.77
PRPF4B-208ENST00000490653 VPS9D1Q9Y2B5 631 aa10.21□□□□□ -0.77
PRPF4B-208ENST00000490653 LTN1O94822 1766 aa10.21□□□□□ -0.78
PRPF4B-208ENST00000490653 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.78
PRPF4B-208ENST00000490653 HSPA5P11021 654 aaKnown RBP10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 SLC15A2Q16348 729 aa10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 ZNF827Q17R98 1081 aa10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 USP54Q70EL1 1684 aa10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 ANKRD36BQ8N2N9 1353 aa10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
PRPF4B-208ENST00000490653 CCDC7Q96M83 1385 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms