RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 HAP1P54257 671 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-213ENST00000490332 CAMK2BQ13554 666 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 FAM182BQ5T319 152 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 PACS2Q86VP3 889 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 CHIC2Q9UKJ5 165 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 WDR90Q96KV7 1748 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 DAPK1P53355 1430 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 SMAPO00193 183 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 DPYSL4O14531 572 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 TSR1Q2NL82 804 aaKnown RBP7□□□□□ -1.29
PTPRK-213ENST00000490332 NKX2-3Q8TAU0 364 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 MTFR1LQ9H019 292 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 FAM198AQ9UFP1 575 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 NRAPQ86VF7 1730 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 TNS2Q63HR2 1409 aa7□□□□□ -1.29
PTPRK-213ENST00000490332 C11orf95C9JLR9 678 aaPredicted RBP6.99□□□□□ -1.29
PTPRK-213ENST00000490332 EIF4G2P78344 907 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPRK-213ENST00000490332 DDX12PQ92771 950 aa6.99□□□□□ -1.29
PTPRK-213ENST00000490332 ARXQ96QS3 562 aa6.99□□□□□ -1.29
PTPRK-213ENST00000490332 ERBINQ96RT1 1412 aa6.99□□□□□ -1.29
PTPRK-213ENST00000490332 ANKRD30AQ9BXX3 1397 aa6.98□□□□□ -1.29
PTPRK-213ENST00000490332 FAM161AQ3B820 660 aa6.98□□□□□ -1.29
PTPRK-213ENST00000490332 TRIM67Q6ZTA4 783 aa6.98□□□□□ -1.29
PTPRK-213ENST00000490332 ANKRD30BQ9BXX2 1392 aa6.97□□□□□ -1.29
PTPRK-213ENST00000490332 POTECB2RU33 542 aa6.97□□□□□ -1.29
PTPRK-213ENST00000490332 SPATA31A5Q5VU36 1347 aa6.97□□□□□ -1.29
PTPRK-213ENST00000490332 SPATA31A3Q5VYP0 1347 aa6.97□□□□□ -1.29
PTPRK-213ENST00000490332 SPATA31A7Q8IWB4 1347 aa6.97□□□□□ -1.29
PTPRK-213ENST00000490332 ADCY9O60503 1353 aa6.96□□□□□ -1.29
PTPRK-213ENST00000490332 ESCO1Q5FWF5 840 aa6.96□□□□□ -1.3
PTPRK-213ENST00000490332 CDCA7LQ96GN5 454 aa6.96□□□□□ -1.3
PTPRK-213ENST00000490332 CCDC144AA2RUR9 1427 aa6.95□□□□□ -1.3
PTPRK-213ENST00000490332 PLSCR1O15162 318 aa6.95□□□□□ -1.3
PTPRK-213ENST00000490332 L3MBTL2Q969R5 705 aa6.95□□□□□ -1.3
PTPRK-213ENST00000490332 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-213ENST00000490332 PDE4DIPQ5VU43 2346 aa6.95□□□□□ -1.3
PTPRK-213ENST00000490332 ABCA3Q99758 1704 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 FOXO3O43524 673 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 TOMM70O94826 608 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 HSPA5P11021 654 aaKnown RBP6.94□□□□□ -1.3
PTPRK-213ENST00000490332 PRSS12P56730 875 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 NBR1Q14596 966 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
PTPRK-213ENST00000490332 TATDN2Q93075 761 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 PDGFDQ9GZP0 370 aaPredicted RBP6.94□□□□□ -1.3
PTPRK-213ENST00000490332 STK32BQ9NY57 414 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 COL14A1Q05707 1796 aaKnown RBP6.94□□□□□ -1.3
PTPRK-213ENST00000490332 NRXN3Q9Y4C0 1643 aa6.94□□□□□ -1.3
PTPRK-213ENST00000490332 KIAA1210Q9ULL0 1709 aa6.93□□□□□ -1.3
PTPRK-213ENST00000490332 MAP3K7O43318 606 aa6.93□□□□□ -1.3
PTPRK-213ENST00000490332 HSPA1AP0DMV8 641 aaKnown RBP6.93□□□□□ -1.3
PTPRK-213ENST00000490332 HSPA1BP0DMV9 641 aaKnown RBP6.93□□□□□ -1.3
PTPRK-213ENST00000490332 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-213ENST00000490332 MLLT1Q03111 559 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-213ENST00000490332 ZNF526Q8TF50 670 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-213ENST00000490332 BTG4Q9NY30 223 aa6.93□□□□□ -1.3
PTPRK-213ENST00000490332 TNS3Q68CZ2 1445 aa6.93□□□□□ -1.3
PTPRK-213ENST00000490332 CDC42BPGQ6DT37 1551 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 NEFLP07196 543 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 PRIM1P49642 420 aaKnown RBP6.92□□□□□ -1.3
PTPRK-213ENST00000490332 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 KIF1AQ12756 1690 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 USP19O94966 1318 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 ARHGEF10O15013 1369 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 KIF15Q9NS87 1388 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 ANKRD50Q9ULJ7 1429 aa6.92□□□□□ -1.3
PTPRK-213ENST00000490332 SLC15A2Q16348 729 aa6.91□□□□□ -1.3
PTPRK-213ENST00000490332 HIRIP3Q9BW71 556 aaPredicted RBP6.91□□□□□ -1.3
PTPRK-213ENST00000490332 PNMA3Q9UL41 463 aa6.91□□□□□ -1.3
PTPRK-213ENST00000490332 SUPT16HQ9Y5B9 1047 aaKnown RBP6.91□□□□□ -1.3
PTPRK-213ENST00000490332 METP08581 1390 aa6.91□□□□□ -1.3
PTPRK-213ENST00000490332 IQGAP3Q86VI3 1631 aa6.9□□□□□ -1.3
PTPRK-213ENST00000490332 COPS2P61201 443 aa6.9□□□□□ -1.3
PTPRK-213ENST00000490332 PSME1Q06323 249 aa6.9□□□□□ -1.3
PTPRK-213ENST00000490332 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
PTPRK-213ENST00000490332 PRAG1Q86YV5 1406 aa6.9□□□□□ -1.31
PTPRK-213ENST00000490332 ARHGEF28Q8N1W1 1705 aaKnown RBP6.9□□□□□ -1.31
PTPRK-213ENST00000490332 NBPF26B4DH59 902 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 DGAT1O75907 488 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 POLD1P28340 1107 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 GGCXP38435 758 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 ERICH6BQ5W0A0 696 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 WASHC2AQ641Q2 1341 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 NUP155O75694 1391 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 CCDC7Q96M83 1385 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 TULP4Q9NRJ4 1543 aa6.89□□□□□ -1.31
PTPRK-213ENST00000490332 SBNO1A3KN83 1393 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 ROCK2O75116 1388 aaKnown RBP6.88□□□□□ -1.31
PTPRK-213ENST00000490332 RNF40O75150 1001 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 ZPR1O75312 459 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRK-213ENST00000490332 RGS19P49795 217 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 FSTL1Q12841 308 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 PDIA6Q15084 440 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 PKDCCQ504Y2 493 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 BARGINQ6ZT62 677 aa6.88□□□□□ -1.31
PTPRK-213ENST00000490332 KRT28Q7Z3Y7 464 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms