RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
SRM-206ENST00000490101 GPR162Q16538 588 aa24.02■■□□□ 1.44
SRM-206ENST00000490101 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
SRM-206ENST00000490101 PIGBQ92521 554 aa24.01■■□□□ 1.43
SRM-206ENST00000490101 SMARCC1Q92922 1105 aaPredicted RBP24.01■■□□□ 1.43
SRM-206ENST00000490101 TAF1LQ8IZX4 1826 aa24■■□□□ 1.43
SRM-206ENST00000490101 NKX1-1Q15270 411 aaPredicted RBP23.99■■□□□ 1.43
SRM-206ENST00000490101 NLGN2Q8NFZ4 835 aa23.99■■□□□ 1.43
SRM-206ENST00000490101 FCHSD2O94868 740 aa23.98■■□□□ 1.43
SRM-206ENST00000490101 C4BP0C0L5 1744 aa23.98■■□□□ 1.43
SRM-206ENST00000490101 CHD4Q14839 1912 aa23.97■■□□□ 1.43
SRM-206ENST00000490101 IFNL2Q8IZJ0 200 aa23.97■■□□□ 1.43
SRM-206ENST00000490101 RUNDC1Q96C34 613 aa23.97■■□□□ 1.43
SRM-206ENST00000490101 AK7Q96M32 723 aa23.97■■□□□ 1.43
SRM-206ENST00000490101 PNNQ9H307 717 aaKnown RBP23.97■■□□□ 1.43
SRM-206ENST00000490101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.97■■□□□ 1.43
SRM-206ENST00000490101 TMOD3Q9NYL9 352 aa23.97■■□□□ 1.43
SRM-206ENST00000490101 PHKG2P15735 406 aa23.96■■□□□ 1.43
SRM-206ENST00000490101 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
SRM-206ENST00000490101 PHF14O94880 888 aa23.95■■□□□ 1.42
SRM-206ENST00000490101 HMGB2P26583 209 aaKnown RBP23.95■■□□□ 1.42
SRM-206ENST00000490101 FLAD1Q8NFF5 587 aa23.95■■□□□ 1.42
SRM-206ENST00000490101 ZBED9Q6R2W3 1325 aa23.94■■□□□ 1.42
SRM-206ENST00000490101 SMIM5Q71RC9 77 aa23.94■■□□□ 1.42
SRM-206ENST00000490101 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
SRM-206ENST00000490101 RSPH6AQ9H0K4 717 aa23.94■■□□□ 1.42
SRM-206ENST00000490101 IGSF1Q8N6C5 1336 aa23.93■■□□□ 1.42
SRM-206ENST00000490101 AMIGO3Q86WK7 504 aa23.93■■□□□ 1.42
SRM-206ENST00000490101 PLEKHF1Q96S99 279 aa23.93■■□□□ 1.42
SRM-206ENST00000490101 ASAP1Q9ULH1 1129 aa23.93■■□□□ 1.42
SRM-206ENST00000490101 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
SRM-206ENST00000490101 SIK1P57059 783 aa23.92■■□□□ 1.42
SRM-206ENST00000490101 NGEFQ8N5V2 710 aa23.92■■□□□ 1.42
SRM-206ENST00000490101 APAF1O14727 1248 aa23.9■■□□□ 1.42
SRM-206ENST00000490101 HMOX1P09601 288 aa23.9■■□□□ 1.42
SRM-206ENST00000490101 LINC00116Q8NCU8 138 aa23.9■■□□□ 1.42
SRM-206ENST00000490101 KDRP35968 1356 aa23.9■■□□□ 1.42
SRM-206ENST00000490101 UBR3Q6ZT12 1888 aa23.9■■□□□ 1.42
SRM-206ENST00000490101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.89■■□□□ 1.41
SRM-206ENST00000490101 PRKAR2BP31323 418 aa23.89■■□□□ 1.41
SRM-206ENST00000490101 NCBP3Q53F19 620 aaKnown RBP23.89■■□□□ 1.41
SRM-206ENST00000490101 SULT6B1Q6IMI4 303 aa23.89■■□□□ 1.41
SRM-206ENST00000490101 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
SRM-206ENST00000490101 ATP6V1AP38606 617 aa23.88■■□□□ 1.41
SRM-206ENST00000490101 ITPK1Q13572 414 aa23.88■■□□□ 1.41
SRM-206ENST00000490101 ATG3Q9NT62 314 aa23.88■■□□□ 1.41
SRM-206ENST00000490101 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
SRM-206ENST00000490101 AEBP1Q8IUX7 1158 aa23.87■■□□□ 1.41
SRM-206ENST00000490101 MAPK8IP3Q9UPT6 1336 aa23.86■■□□□ 1.41
SRM-206ENST00000490101 GNPATO15228 680 aa23.86■■□□□ 1.41
SRM-206ENST00000490101 ZNF530Q6P9A1 599 aaPredicted RBP23.86■■□□□ 1.41
SRM-206ENST00000490101 PLEKHG2Q9H7P9 1386 aa23.86■■□□□ 1.41
SRM-206ENST00000490101 NEFMP07197 916 aa23.85■■□□□ 1.41
SRM-206ENST00000490101 YBX3P16989 372 aaKnown RBP eCLIP23.85■■□□□ 1.412e-9■■□□□ 12.4
SRM-206ENST00000490101 SSFA2P28290 1259 aa23.85■■□□□ 1.41
SRM-206ENST00000490101 SENP3-EIF4A1A0A087X0R7 540 aa23.83■■□□□ 1.41
SRM-206ENST00000490101 HSP90AB1P08238 724 aaKnown RBP23.83■■□□□ 1.41
SRM-206ENST00000490101 DCAF5Q96JK2 942 aa23.83■■□□□ 1.41
SRM-206ENST00000490101 RBM42Q9BTD8 480 aaKnown RBP23.83■■□□□ 1.41
SRM-206ENST00000490101 CD2APQ9Y5K6 639 aa23.83■■□□□ 1.41
SRM-206ENST00000490101 ERVV-2B6SEH9 535 aa23.82■■□□□ 1.4
SRM-206ENST00000490101 PHACTR3Q96KR7 559 aa23.82■■□□□ 1.4
SRM-206ENST00000490101 GRIN3BO60391 1043 aa23.81■■□□□ 1.4
SRM-206ENST00000490101 TMPOP42166 694 aaKnown RBP23.81■■□□□ 1.4
SRM-206ENST00000490101 AMOTQ4VCS5 1084 aa23.81■■□□□ 1.4
SRM-206ENST00000490101 SALL2Q9Y467 1007 aaPredicted RBP23.81■■□□□ 1.4
SRM-206ENST00000490101 KDM6AO15550 1401 aaPredicted RBP23.81■■□□□ 1.4
SRM-206ENST00000490101 CABP4P57796 275 aa23.8■■□□□ 1.4
SRM-206ENST00000490101 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
SRM-206ENST00000490101 C1orf141Q5JVX7 400 aa23.8■■□□□ 1.4
SRM-206ENST00000490101 ZNF521Q96K83 1311 aa23.8■■□□□ 1.4
SRM-206ENST00000490101 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
SRM-206ENST00000490101 SLC4A9Q96Q91 983 aa23.79■■□□□ 1.4
SRM-206ENST00000490101 WWC3Q9ULE0 1092 aa23.79■■□□□ 1.4
SRM-206ENST00000490101 RRP7AQ9Y3A4 280 aaKnown RBP23.77■■□□□ 1.4
SRM-206ENST00000490101 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
SRM-206ENST00000490101 NEUROD2Q15784 382 aa23.75■■□□□ 1.39
SRM-206ENST00000490101 WWC1Q8IX03 1113 aa23.75■■□□□ 1.39
SRM-206ENST00000490101 RIPK4P57078 832 aa23.74■■□□□ 1.39
SRM-206ENST00000490101 TRAPPC3LQ5T215 181 aa23.74■■□□□ 1.39
SRM-206ENST00000490101 PTCD1O75127 700 aaKnown RBP23.73■■□□□ 1.39
SRM-206ENST00000490101 MMP10P09238 476 aa23.73■■□□□ 1.39
SRM-206ENST00000490101 NFATC2IPQ8NCF5 419 aa23.73■■□□□ 1.39
SRM-206ENST00000490101 TRIM35Q9UPQ4 493 aa23.73■■□□□ 1.39
SRM-206ENST00000490101 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
SRM-206ENST00000490101 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
SRM-206ENST00000490101 C1QTNF8P60827 252 aa23.71■■□□□ 1.39
SRM-206ENST00000490101 GOLGA2Q08379 1002 aa23.71■■□□□ 1.39
SRM-206ENST00000490101 WDR63Q8IWG1 891 aa23.71■■□□□ 1.39
SRM-206ENST00000490101 GAS2L2Q8NHY3 880 aa23.71■■□□□ 1.39
SRM-206ENST00000490101 CNTNAP4Q9C0A0 1308 aa23.7■■□□□ 1.38
SRM-206ENST00000490101 GIGYF1O75420 1035 aaPredicted RBP23.7■■□□□ 1.38
SRM-206ENST00000490101 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
SRM-206ENST00000490101 LMOD3Q0VAK6 560 aa23.69■■□□□ 1.38
SRM-206ENST00000490101 RC3H1Q5TC82 1133 aaKnown RBP23.69■■□□□ 1.38
SRM-206ENST00000490101 ARHGEF1Q92888 912 aaKnown RBP23.69■■□□□ 1.38
SRM-206ENST00000490101 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
SRM-206ENST00000490101 CICQ96RK0 1608 aaPredicted RBP23.67■■□□□ 1.38
SRM-206ENST00000490101 RPS6KA4O75676 772 aa23.67■■□□□ 1.38
SRM-206ENST00000490101 ADRA2BP18089 450 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms