RNA–Protein interactions for RNA: ENST00000489647.4

POLR1D-206, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 1,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-206ENST00000489647 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 CEMIPQ8WUJ3 1361 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 PLEKHG2Q9H7P9 1386 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 NWD2Q9ULI1 1742 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
POLR1D-206ENST00000489647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.188e-13■□□□□ 10
POLR1D-206ENST00000489647 WNK3Q9BYP7 1800 aa13.89□□□□□ -0.19
POLR1D-206ENST00000489647 HSPA1LP34931 641 aa13.89□□□□□ -0.19
POLR1D-206ENST00000489647 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.89□□□□□ -0.19
POLR1D-206ENST00000489647 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
POLR1D-206ENST00000489647 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
POLR1D-206ENST00000489647 ADAMTS7Q9UKP4 1686 aa13.89□□□□□ -0.19
POLR1D-206ENST00000489647 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
POLR1D-206ENST00000489647 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
POLR1D-206ENST00000489647 IL2RBP14784 551 aa13.88□□□□□ -0.19
POLR1D-206ENST00000489647 TSPYL6Q8N831 410 aa13.88□□□□□ -0.19
POLR1D-206ENST00000489647 RNMTO43148 476 aaKnown RBP13.87□□□□□ -0.19
POLR1D-206ENST00000489647 PHKG2P15735 406 aa13.87□□□□□ -0.19
POLR1D-206ENST00000489647 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
POLR1D-206ENST00000489647 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
POLR1D-206ENST00000489647 TEFQ10587 303 aa13.87□□□□□ -0.19
POLR1D-206ENST00000489647 TAF7Q15545 349 aaPredicted RBP13.87□□□□□ -0.19
POLR1D-206ENST00000489647 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
POLR1D-206ENST00000489647 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
POLR1D-206ENST00000489647 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
POLR1D-206ENST00000489647 CYP27B1O15528 508 aa13.86□□□□□ -0.19
POLR1D-206ENST00000489647 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
POLR1D-206ENST00000489647 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
POLR1D-206ENST00000489647 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
POLR1D-206ENST00000489647 SSH1Q8WYL5 1049 aa13.86□□□□□ -0.19
POLR1D-206ENST00000489647 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
POLR1D-206ENST00000489647 SLIT2O94813 1529 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 VAMP4O75379 141 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
POLR1D-206ENST00000489647 LRP6O75581 1613 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 SPATA31A6Q5VVP1 1343 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 PCDH11YQ9BZA8 1340 aa13.85□□□□□ -0.19
POLR1D-206ENST00000489647 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
POLR1D-206ENST00000489647 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
POLR1D-206ENST00000489647 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
POLR1D-206ENST00000489647 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
POLR1D-206ENST00000489647 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
POLR1D-206ENST00000489647 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
POLR1D-206ENST00000489647 EXOC6Q8TAG9 804 aa13.83□□□□□ -0.2
POLR1D-206ENST00000489647 NGLY1Q96IV0 654 aa13.83□□□□□ -0.2
POLR1D-206ENST00000489647 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
POLR1D-206ENST00000489647 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
POLR1D-206ENST00000489647 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
POLR1D-206ENST00000489647 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
POLR1D-206ENST00000489647 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
POLR1D-206ENST00000489647 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
POLR1D-206ENST00000489647 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
POLR1D-206ENST00000489647 SPATA31A1Q5TZJ5 1347 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 CACNA1FO60840 1977 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
POLR1D-206ENST00000489647 SLC52A2Q9HAB3 445 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 PPP4R2Q9NY27 417 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 MRC1P22897 1456 aa13.81□□□□□ -0.2
POLR1D-206ENST00000489647 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
POLR1D-206ENST00000489647 SPATA31A5Q5VU36 1347 aa13.8□□□□□ -0.2
POLR1D-206ENST00000489647 SPATA31A7Q8IWB4 1347 aa13.8□□□□□ -0.2
POLR1D-206ENST00000489647 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
POLR1D-206ENST00000489647 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.79□□□□□ -0.2
POLR1D-206ENST00000489647 BCL9LQ86UU0 1499 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 KCNQ3O43525 872 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
POLR1D-206ENST00000489647 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
POLR1D-206ENST00000489647 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
POLR1D-206ENST00000489647 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
POLR1D-206ENST00000489647 NFATC2IPQ8NCF5 419 aa13.78□□□□□ -0.2
POLR1D-206ENST00000489647 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
POLR1D-206ENST00000489647 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
POLR1D-206ENST00000489647 EVX2Q03828 476 aa13.78□□□□□ -0.2
POLR1D-206ENST00000489647 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
POLR1D-206ENST00000489647 ITGB4P16144 1822 aa13.78□□□□□ -0.2
POLR1D-206ENST00000489647 RLBP1P12271 317 aa13.77□□□□□ -0.21
POLR1D-206ENST00000489647 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
POLR1D-206ENST00000489647 CABP4P57796 275 aa13.77□□□□□ -0.21
POLR1D-206ENST00000489647 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
POLR1D-206ENST00000489647 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
POLR1D-206ENST00000489647 CDCA7Q9BWT1 371 aaPredicted RBP13.77□□□□□ -0.21
POLR1D-206ENST00000489647 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
POLR1D-206ENST00000489647 EXOC5O00471 708 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 IPO8O15397 1037 aaKnown RBP13.76□□□□□ -0.21
POLR1D-206ENST00000489647 TRIM27P14373 513 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 B4GALNT3Q6L9W6 998 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 FTSJ3Q8IY81 847 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms