RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
ACTN4-206ENST00000489451 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
ACTN4-206ENST00000489451 SIK1P57059 783 aa16.24■□□□□ 0.19
ACTN4-206ENST00000489451 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-206ENST00000489451 KDRP35968 1356 aa16.24■□□□□ 0.19
ACTN4-206ENST00000489451 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
ACTN4-206ENST00000489451 EIF4G2P78344 907 aaKnown RBP eCLIP16.23■□□□□ 0.19
ACTN4-206ENST00000489451 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
ACTN4-206ENST00000489451 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
ACTN4-206ENST00000489451 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
ACTN4-206ENST00000489451 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
ACTN4-206ENST00000489451 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
ACTN4-206ENST00000489451 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
ACTN4-206ENST00000489451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
ACTN4-206ENST00000489451 PHF14O94880 888 aa16.21■□□□□ 0.19
ACTN4-206ENST00000489451 AK7Q96M32 723 aa16.21■□□□□ 0.19
ACTN4-206ENST00000489451 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
ACTN4-206ENST00000489451 PCDH10Q9P2E7 1040 aa16.21■□□□□ 0.19
ACTN4-206ENST00000489451 KIAA1551Q9HCM1 1747 aa16.2■□□□□ 0.18
ACTN4-206ENST00000489451 KIF3CO14782 793 aa16.2■□□□□ 0.18
ACTN4-206ENST00000489451 FLAD1Q8NFF5 587 aa16.2■□□□□ 0.18
ACTN4-206ENST00000489451 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
ACTN4-206ENST00000489451 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
ACTN4-206ENST00000489451 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
ACTN4-206ENST00000489451 SSFA2P28290 1259 aa16.18■□□□□ 0.18
ACTN4-206ENST00000489451 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
ACTN4-206ENST00000489451 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
ACTN4-206ENST00000489451 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
ACTN4-206ENST00000489451 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
ACTN4-206ENST00000489451 WWC3Q9ULE0 1092 aa16.16■□□□□ 0.18
ACTN4-206ENST00000489451 GNPATO15228 680 aa16.15■□□□□ 0.18
ACTN4-206ENST00000489451 TJP1Q07157 1748 aa16.15■□□□□ 0.18
ACTN4-206ENST00000489451 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-206ENST00000489451 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
ACTN4-206ENST00000489451 SCN11AQ9UI33 1791 aa16.15■□□□□ 0.18
ACTN4-206ENST00000489451 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
ACTN4-206ENST00000489451 IL13P35225 146 aa16.14■□□□□ 0.17
ACTN4-206ENST00000489451 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-206ENST00000489451 VIRMAQ69YN4 1812 aaKnown RBP16.13■□□□□ 0.17
ACTN4-206ENST00000489451 TOMM70O94826 608 aa16.13■□□□□ 0.17
ACTN4-206ENST00000489451 HMGB2P26583 209 aaKnown RBP16.13■□□□□ 0.17
ACTN4-206ENST00000489451 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
ACTN4-206ENST00000489451 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
ACTN4-206ENST00000489451 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
ACTN4-206ENST00000489451 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
ACTN4-206ENST00000489451 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
ACTN4-206ENST00000489451 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
ACTN4-206ENST00000489451 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-206ENST00000489451 N4BP2Q86UW6 1770 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-206ENST00000489451 PXDNLA1KZ92 1463 aa16.11■□□□□ 0.17
ACTN4-206ENST00000489451 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
ACTN4-206ENST00000489451 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
ACTN4-206ENST00000489451 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
ACTN4-206ENST00000489451 MMP10P09238 476 aa16.1■□□□□ 0.17
ACTN4-206ENST00000489451 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
ACTN4-206ENST00000489451 SULT6B1Q6IMI4 303 aa16.1■□□□□ 0.17
ACTN4-206ENST00000489451 C10orf71Q711Q0 1435 aa16.1■□□□□ 0.17
ACTN4-206ENST00000489451 HTRA3P83110 453 aa16.09■□□□□ 0.17
ACTN4-206ENST00000489451 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
ACTN4-206ENST00000489451 ARHGEF1Q92888 912 aaKnown RBP16.09■□□□□ 0.17
ACTN4-206ENST00000489451 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
ACTN4-206ENST00000489451 MRC1P22897 1456 aa16.09■□□□□ 0.17
ACTN4-206ENST00000489451 PER1O15534 1290 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-206ENST00000489451 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
ACTN4-206ENST00000489451 KNSTRNQ9Y448 316 aa16.08■□□□□ 0.16
ACTN4-206ENST00000489451 GYS1P13807 737 aa16.07■□□□□ 0.16
ACTN4-206ENST00000489451 MTHFSP49914 203 aa16.07■□□□□ 0.16
ACTN4-206ENST00000489451 CABP4P57796 275 aa16.07■□□□□ 0.16
ACTN4-206ENST00000489451 NFATC2IPQ8NCF5 419 aa16.07■□□□□ 0.16
ACTN4-206ENST00000489451 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-206ENST00000489451 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
ACTN4-206ENST00000489451 TRAPPC3LQ5T215 181 aa16.06■□□□□ 0.16
ACTN4-206ENST00000489451 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
ACTN4-206ENST00000489451 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
ACTN4-206ENST00000489451 LGR6Q9HBX8 967 aa16.05■□□□□ 0.16
ACTN4-206ENST00000489451 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
ACTN4-206ENST00000489451 ADRA2BP18089 450 aa16.04■□□□□ 0.16
ACTN4-206ENST00000489451 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
ACTN4-206ENST00000489451 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
ACTN4-206ENST00000489451 HMOX1P09601 288 aa16.03■□□□□ 0.16
ACTN4-206ENST00000489451 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
ACTN4-206ENST00000489451 HSPA1AP0DMV8 641 aaKnown RBP16.02■□□□□ 0.16
ACTN4-206ENST00000489451 HSPA1BP0DMV9 641 aaKnown RBP16.02■□□□□ 0.16
ACTN4-206ENST00000489451 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.16
ACTN4-206ENST00000489451 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.16
ACTN4-206ENST00000489451 C16orf71Q8IYS4 520 aaPredicted RBP16.02■□□□□ 0.16
ACTN4-206ENST00000489451 NLGN1Q8N2Q7 840 aa16.02■□□□□ 0.16
ACTN4-206ENST00000489451 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
ACTN4-206ENST00000489451 A0A0G2JLW4 131 aa16.01■□□□□ 0.15
ACTN4-206ENST00000489451 KCNA3P22001 575 aa16.01■□□□□ 0.15
ACTN4-206ENST00000489451 DDR1Q08345 913 aa16.01■□□□□ 0.15
ACTN4-206ENST00000489451 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
ACTN4-206ENST00000489451 SLC52A2Q9HAB3 445 aa16.01■□□□□ 0.15
ACTN4-206ENST00000489451 ARFGEF1Q9Y6D6 1849 aa16.01■□□□□ 0.15
ACTN4-206ENST00000489451 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
ACTN4-206ENST00000489451 RFC4P35249 363 aa16■□□□□ 0.15
ACTN4-206ENST00000489451 SLC39A6Q13433 755 aa16■□□□□ 0.15
ACTN4-206ENST00000489451 FKBP8Q14318 412 aa16■□□□□ 0.15
ACTN4-206ENST00000489451 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
ACTN4-206ENST00000489451 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms