RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
CACUL1-204ENST00000489169 CEP152O94986 1710 aa10.41□□□□□ -0.74
CACUL1-204ENST00000489169 NPATQ14207 1427 aa10.41□□□□□ -0.74
CACUL1-204ENST00000489169 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
CACUL1-204ENST00000489169 CD46P15529 392 aa10.4□□□□□ -0.74
CACUL1-204ENST00000489169 MSS51Q4VC12 460 aa10.4□□□□□ -0.74
CACUL1-204ENST00000489169 NOS1P29475 1434 aa10.4□□□□□ -0.75
CACUL1-204ENST00000489169 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
CACUL1-204ENST00000489169 GRIPAP1Q4V328 841 aa10.39□□□□□ -0.75
CACUL1-204ENST00000489169 RALGAPBQ86X10 1494 aa10.38□□□□□ -0.75
CACUL1-204ENST00000489169 FAM187AA6NFU0 413 aa10.38□□□□□ -0.75
CACUL1-204ENST00000489169 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
CACUL1-204ENST00000489169 TRAIPQ9BWF2 469 aa10.38□□□□□ -0.75
CACUL1-204ENST00000489169 PRDM9Q9NQV7 894 aa10.38□□□□□ -0.75
CACUL1-204ENST00000489169 CLTCL1P53675 1640 aa10.37□□□□□ -0.75
CACUL1-204ENST00000489169 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
CACUL1-204ENST00000489169 RNF19BQ6ZMZ0 732 aa10.37□□□□□ -0.75
CACUL1-204ENST00000489169 NPM2Q86SE8 214 aaKnown RBP10.37□□□□□ -0.75
CACUL1-204ENST00000489169 COG6Q9Y2V7 657 aa10.37□□□□□ -0.75
CACUL1-204ENST00000489169 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
CACUL1-204ENST00000489169 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
CACUL1-204ENST00000489169 CLK2P49760 499 aaKnown RBP10.36□□□□□ -0.75
CACUL1-204ENST00000489169 SLC52A1Q9NWF4 448 aa10.36□□□□□ -0.75
CACUL1-204ENST00000489169 RPGRIP1LQ68CZ1 1315 aa10.35□□□□□ -0.75
CACUL1-204ENST00000489169 KIF1BO60333 1816 aa10.35□□□□□ -0.75
CACUL1-204ENST00000489169 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
CACUL1-204ENST00000489169 TMEM259Q4ZIN3 620 aa10.35□□□□□ -0.75
CACUL1-204ENST00000489169 PPP2R2DQ66LE6 453 aa10.35□□□□□ -0.75
CACUL1-204ENST00000489169 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
CACUL1-204ENST00000489169 MYOM2P54296 1465 aa10.35□□□□□ -0.75
CACUL1-204ENST00000489169 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 RFC5P40937 340 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 MMP16P51512 607 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 FOXC1Q12948 553 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 Q3C1V9 767 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 DCAF11Q8TEB1 546 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
CACUL1-204ENST00000489169 TOR4AQ9NXH8 423 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
CACUL1-204ENST00000489169 GPRASP1Q5JY77 1395 aa10.34□□□□□ -0.75
CACUL1-204ENST00000489169 LAMC1P11047 1609 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 TOM1O60784 492 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 KDM4AO75164 1064 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 ZNF775Q96BV0 537 aaPredicted RBP10.33□□□□□ -0.76
CACUL1-204ENST00000489169 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 ERVK-7P63135 1459 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 MROH2AA6NES4 1674 aa10.33□□□□□ -0.76
CACUL1-204ENST00000489169 USP46P62068 366 aa10.32□□□□□ -0.76
CACUL1-204ENST00000489169 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
CACUL1-204ENST00000489169 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
CACUL1-204ENST00000489169 AAASQ9NRG9 546 aa10.32□□□□□ -0.76
CACUL1-204ENST00000489169 SYNMO15061 1565 aa10.31□□□□□ -0.76
CACUL1-204ENST00000489169 KIAA1210Q9ULL0 1709 aa10.31□□□□□ -0.76
CACUL1-204ENST00000489169 POTECB2RU33 542 aa10.31□□□□□ -0.76
CACUL1-204ENST00000489169 TRPM1Q7Z4N2 1603 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 AVPP01185 164 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 RGL3Q3MIN7 710 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 CLTCQ00610 1675 aaKnown RBP10.3□□□□□ -0.76
CACUL1-204ENST00000489169 ZFYVE9O95405 1425 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 SIGLEC1Q9BZZ2 1709 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
CACUL1-204ENST00000489169 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
CACUL1-204ENST00000489169 ST8SIA5O15466 376 aa10.29□□□□□ -0.76
CACUL1-204ENST00000489169 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
CACUL1-204ENST00000489169 FBXO31Q5XUX0 539 aaPredicted RBP10.29□□□□□ -0.76
CACUL1-204ENST00000489169 USB1Q9BQ65 265 aaKnown RBP10.29□□□□□ -0.76
CACUL1-204ENST00000489169 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
CACUL1-204ENST00000489169 ZNF335Q9H4Z2 1342 aaPredicted RBP10.29□□□□□ -0.76
CACUL1-204ENST00000489169 ZMYM3Q14202 1370 aa10.28□□□□□ -0.76
CACUL1-204ENST00000489169 USP47Q96K76 1375 aa10.28□□□□□ -0.76
CACUL1-204ENST00000489169 IFT172Q9UG01 1749 aa10.28□□□□□ -0.76
CACUL1-204ENST00000489169 UGGT1Q9NYU2 1555 aa10.28□□□□□ -0.76
CACUL1-204ENST00000489169 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
CACUL1-204ENST00000489169 CARD11Q9BXL7 1154 aa10.28□□□□□ -0.76
CACUL1-204ENST00000489169 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
CACUL1-204ENST00000489169 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
CACUL1-204ENST00000489169 ZBTB24O43167 697 aaPredicted RBP10.27□□□□□ -0.77
CACUL1-204ENST00000489169 HOXA2O43364 376 aa10.27□□□□□ -0.77
CACUL1-204ENST00000489169 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
CACUL1-204ENST00000489169 CYP4X1Q8N118 509 aa10.27□□□□□ -0.77
CACUL1-204ENST00000489169 KDM5AP29375 1690 aaKnown RBP10.27□□□□□ -0.77
CACUL1-204ENST00000489169 CFAP65Q6ZU64 1925 aaKnown RBP10.27□□□□□ -0.77
CACUL1-204ENST00000489169 WNT7AO00755 349 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 SPTLC1O15269 473 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 TRIM32Q13049 653 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 HLA-CQ95604 372 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 PPLO60437 1756 aa10.26□□□□□ -0.77
CACUL1-204ENST00000489169 NLRP1Q9C000 1473 aa10.25□□□□□ -0.77
CACUL1-204ENST00000489169 IDI1Q13907 227 aa10.25□□□□□ -0.77
CACUL1-204ENST00000489169 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
CACUL1-204ENST00000489169 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
CACUL1-204ENST00000489169 TNRQ92752 1358 aa10.25□□□□□ -0.77
CACUL1-204ENST00000489169 SETBP1Q9Y6X0 1596 aa10.24□□□□□ -0.77
CACUL1-204ENST00000489169 GJA5P36382 358 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms