RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 TNS2Q63HR2 1409 aa14.9□□□□□ -0.02
CMSS1-205ENST00000489081 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
CMSS1-205ENST00000489081 EXOC5O00471 708 aa14.89□□□□□ -0.03
CMSS1-205ENST00000489081 ATRNO75882 1429 aa14.89□□□□□ -0.03
CMSS1-205ENST00000489081 WNK3Q9BYP7 1800 aa14.88□□□□□ -0.03
CMSS1-205ENST00000489081 SLC52A2Q9HAB3 445 aa14.88□□□□□ -0.03
CMSS1-205ENST00000489081 SHANK3Q9BYB0 1731 aa14.88□□□□□ -0.03
CMSS1-205ENST00000489081 DDB1Q16531 1140 aa14.87□□□□□ -0.03
CMSS1-205ENST00000489081 FAM98CQ17RN3 349 aaKnown RBP14.87□□□□□ -0.03
CMSS1-205ENST00000489081 GJD4Q96KN9 370 aaPredicted RBP14.87□□□□□ -0.03
CMSS1-205ENST00000489081 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
CMSS1-205ENST00000489081 MRC1P22897 1456 aa14.87□□□□□ -0.03
CMSS1-205ENST00000489081 RARSP54136 660 aaKnown RBP14.86□□□□□ -0.03
CMSS1-205ENST00000489081 TSPYL6Q8N831 410 aa14.86□□□□□ -0.03
CMSS1-205ENST00000489081 C8orf58Q8NAV2 365 aa14.86□□□□□ -0.03
CMSS1-205ENST00000489081 BTBD11A6QL63 1104 aa14.85□□□□□ -0.03
CMSS1-205ENST00000489081 ERVV-2B6SEH9 535 aa14.85□□□□□ -0.03
CMSS1-205ENST00000489081 VAMP4O75379 141 aa14.85□□□□□ -0.03
CMSS1-205ENST00000489081 KRT24Q2M2I5 525 aa14.85□□□□□ -0.03
CMSS1-205ENST00000489081 SCN11AQ9UI33 1791 aa14.85□□□□□ -0.03
CMSS1-205ENST00000489081 RRP1P56182 461 aaKnown RBP14.84□□□□□ -0.03
CMSS1-205ENST00000489081 CABP4P57796 275 aa14.84□□□□□ -0.03
CMSS1-205ENST00000489081 TWISTNBQ3B726 338 aaPredicted RBP14.84□□□□□ -0.03
CMSS1-205ENST00000489081 NFATC2IPQ8NCF5 419 aa14.84□□□□□ -0.03
CMSS1-205ENST00000489081 ZNF428Q96B54 188 aa14.84□□□□□ -0.03
CMSS1-205ENST00000489081 GLI3P10071 1580 aa14.84□□□□□ -0.03
CMSS1-205ENST00000489081 ELL2O00472 640 aaPredicted RBP14.83□□□□□ -0.04
CMSS1-205ENST00000489081 KCNQ3O43525 872 aa14.83□□□□□ -0.04
CMSS1-205ENST00000489081 BCAR3O75815 825 aa14.83□□□□□ -0.04
CMSS1-205ENST00000489081 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
CMSS1-205ENST00000489081 EIF4A1P60842 406 aaKnown RBP14.83□□□□□ -0.04
CMSS1-205ENST00000489081 QTRT2Q9H974 415 aaKnown RBP14.83□□□□□ -0.04
CMSS1-205ENST00000489081 ONECUT3O60422 494 aaPredicted RBP14.82□□□□□ -0.04
CMSS1-205ENST00000489081 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
CMSS1-205ENST00000489081 SIPA1L3O60292 1781 aaPredicted RBP14.82□□□□□ -0.04
CMSS1-205ENST00000489081 THSD7AQ9UPZ6 1657 aa14.81□□□□□ -0.04
CMSS1-205ENST00000489081 ALDH1L2Q3SY69 923 aa14.81□□□□□ -0.04
CMSS1-205ENST00000489081 SSH1Q8WYL5 1049 aa14.81□□□□□ -0.04
CMSS1-205ENST00000489081 SOS1Q07889 1333 aaPredicted RBP14.81□□□□□ -0.04
CMSS1-205ENST00000489081 KDM3BQ7LBC6 1761 aa14.8□□□□□ -0.04
CMSS1-205ENST00000489081 NEFLP07196 543 aa14.8□□□□□ -0.04
CMSS1-205ENST00000489081 ZNF772Q68DY9 489 aaPredicted RBP14.8□□□□□ -0.04
CMSS1-205ENST00000489081 ZNF790Q6PG37 636 aa14.8□□□□□ -0.04
CMSS1-205ENST00000489081 BCL2L13Q9BXK5 485 aa14.8□□□□□ -0.04
CMSS1-205ENST00000489081 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
CMSS1-205ENST00000489081 A0A0G2JS52 829 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 PLIN1O60240 522 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 MYT1Q01538 1121 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 SLC39A6Q13433 755 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.79□□□□□ -0.04
CMSS1-205ENST00000489081 SMC4Q9NTJ3 1288 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 HEG1Q9ULI3 1381 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 GTF3C3Q9Y5Q9 886 aa14.79□□□□□ -0.04
CMSS1-205ENST00000489081 TOGARAM1Q9Y4F4 1720 aa14.78□□□□□ -0.04
CMSS1-205ENST00000489081 HOXB7P09629 217 aa14.78□□□□□ -0.04
CMSS1-205ENST00000489081 BRPF1P55201 1214 aaPredicted RBP14.78□□□□□ -0.04
CMSS1-205ENST00000489081 TMOD3Q9NYL9 352 aa14.78□□□□□ -0.04
CMSS1-205ENST00000489081 SEPT12Q8IYM1 358 aa14.77□□□□□ -0.05
CMSS1-205ENST00000489081 MRPL50Q8N5N7 158 aaKnown RBP14.77□□□□□ -0.05
CMSS1-205ENST00000489081 PIGBQ92521 554 aa14.77□□□□□ -0.05
CMSS1-205ENST00000489081 BCL9O00512 1426 aa14.76□□□□□ -0.05
CMSS1-205ENST00000489081 GIGYF1O75420 1035 aaPredicted RBP14.76□□□□□ -0.05
CMSS1-205ENST00000489081 PRIM1P49642 420 aaKnown RBP14.76□□□□□ -0.05
CMSS1-205ENST00000489081 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
CMSS1-205ENST00000489081 FKBP8Q14318 412 aa14.76□□□□□ -0.05
CMSS1-205ENST00000489081 TTC5Q8N0Z6 440 aa14.76□□□□□ -0.05
CMSS1-205ENST00000489081 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
CMSS1-205ENST00000489081 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
CMSS1-205ENST00000489081 RBM6P78332 1123 aaKnown RBP14.75□□□□□ -0.05
CMSS1-205ENST00000489081 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
CMSS1-205ENST00000489081 FMNL2Q96PY5 1086 aa14.75□□□□□ -0.05
CMSS1-205ENST00000489081 CCDC30Q5VVM6 783 aa14.74□□□□□ -0.05
CMSS1-205ENST00000489081 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
CMSS1-205ENST00000489081 C20orf194Q5TEA3 1177 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 HDGFL1Q5TGJ6 251 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 SYTL4Q96C24 671 aaPredicted RBP14.73□□□□□ -0.05
CMSS1-205ENST00000489081 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 CHMP4AQ9BY43 222 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 ATG3Q9NT62 314 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 RGS17Q9UGC6 210 aaPredicted RBP14.73□□□□□ -0.05
CMSS1-205ENST00000489081 ASAP1Q9ULH1 1129 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 NOB1Q9ULX3 412 aaKnown RBP14.73□□□□□ -0.05
CMSS1-205ENST00000489081 PAPPAQ13219 1627 aa14.73□□□□□ -0.05
CMSS1-205ENST00000489081 KCPQ6ZWJ8 1503 aa14.72□□□□□ -0.05
CMSS1-205ENST00000489081 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
CMSS1-205ENST00000489081 SNRPA1P09661 255 aaKnown RBP14.72□□□□□ -0.05
CMSS1-205ENST00000489081 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
CMSS1-205ENST00000489081 PDE3AQ14432 1141 aa14.72□□□□□ -0.05
CMSS1-205ENST00000489081 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
CMSS1-205ENST00000489081 NECTIN2Q92692 538 aa14.72□□□□□ -0.05
CMSS1-205ENST00000489081 DOT1LQ8TEK3 1739 aa14.72□□□□□ -0.05
CMSS1-205ENST00000489081 IPO8O15397 1037 aaKnown RBP14.71□□□□□ -0.05
CMSS1-205ENST00000489081 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.05
CMSS1-205ENST00000489081 ATF7IPQ6VMQ6 1270 aa14.71□□□□□ -0.05
CMSS1-205ENST00000489081 ARHGAP45Q92619 1136 aa14.71□□□□□ -0.05
CMSS1-205ENST00000489081 STK31Q9BXU1 1019 aa14.71□□□□□ -0.05
CMSS1-205ENST00000489081 KCNQ2O43526 872 aa14.7□□□□□ -0.06
CMSS1-205ENST00000489081 PTCD1O75127 700 aaKnown RBP14.7□□□□□ -0.06
CMSS1-205ENST00000489081 TRIM27P14373 513 aa14.7□□□□□ -0.06
CMSS1-205ENST00000489081 RXRBP28702 533 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms