RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 CDC45O75419 566 aa17.38■□□□□ 0.37
RER1-207ENST00000488353 LRSAM1Q6UWE0 723 aa17.38■□□□□ 0.37
RER1-207ENST00000488353 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
RER1-207ENST00000488353 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
RER1-207ENST00000488353 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
RER1-207ENST00000488353 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
RER1-207ENST00000488353 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
RER1-207ENST00000488353 PRPF40AO75400 957 aaKnown RBP17.36■□□□□ 0.37
RER1-207ENST00000488353 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
RER1-207ENST00000488353 NALCNQ8IZF0 1738 aa17.36■□□□□ 0.37
RER1-207ENST00000488353 API5Q9BZZ5 524 aaKnown RBP17.36■□□□□ 0.37
RER1-207ENST00000488353 NLRP6P59044 892 aa17.35■□□□□ 0.37
RER1-207ENST00000488353 DMTNQ08495 405 aa17.35■□□□□ 0.37
RER1-207ENST00000488353 GPT2Q8TD30 523 aa17.35■□□□□ 0.37
RER1-207ENST00000488353 ARID3AQ99856 593 aa17.35■□□□□ 0.37
RER1-207ENST00000488353 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
RER1-207ENST00000488353 MCM10Q7L590 875 aa17.33■□□□□ 0.37
RER1-207ENST00000488353 APBB1O00213 710 aa17.33■□□□□ 0.36
RER1-207ENST00000488353 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
RER1-207ENST00000488353 RBM27Q9P2N5 1060 aaKnown RBP17.33■□□□□ 0.36
RER1-207ENST00000488353 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
RER1-207ENST00000488353 AMPHP49418 695 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 PKP1Q13835 747 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 MYRIPQ8NFW9 859 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
RER1-207ENST00000488353 SYCE3A1L190 88 aa17.31■□□□□ 0.36
RER1-207ENST00000488353 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
RER1-207ENST00000488353 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
RER1-207ENST00000488353 ZSCAN20P17040 1043 aaPredicted RBP17.31■□□□□ 0.36
RER1-207ENST00000488353 ZHX1Q9UKY1 873 aaPredicted RBP17.31■□□□□ 0.36
RER1-207ENST00000488353 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 FLT4P35916 1363 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 FOXO3O43524 673 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 MBD3O95983 291 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
RER1-207ENST00000488353 PRIMPOLQ96LW4 560 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
RER1-207ENST00000488353 ST18O60284 1047 aa17.29■□□□□ 0.36
RER1-207ENST00000488353 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
RER1-207ENST00000488353 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
RER1-207ENST00000488353 FMN2Q9NZ56 1722 aa17.29■□□□□ 0.36
RER1-207ENST00000488353 SMARCA5O60264 1052 aaPredicted RBP17.29■□□□□ 0.36
RER1-207ENST00000488353 HMGN5P82970 282 aaKnown RBP17.29■□□□□ 0.36
RER1-207ENST00000488353 USP26Q9BXU7 913 aa17.29■□□□□ 0.36
RER1-207ENST00000488353 DNTTIP2Q5QJE6 756 aaKnown RBP17.28■□□□□ 0.36
RER1-207ENST00000488353 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
RER1-207ENST00000488353 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
RER1-207ENST00000488353 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
RER1-207ENST00000488353 EYA1Q99502 592 aa17.28■□□□□ 0.36
RER1-207ENST00000488353 PHF8Q9UPP1 1060 aa17.27■□□□□ 0.36
RER1-207ENST00000488353 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.36
RER1-207ENST00000488353 CHD2O14647 1828 aaKnown RBP17.27■□□□□ 0.36
RER1-207ENST00000488353 ADAMTSL3P82987 1691 aa17.27■□□□□ 0.36
RER1-207ENST00000488353 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.35
RER1-207ENST00000488353 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.35
RER1-207ENST00000488353 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
RER1-207ENST00000488353 TTC22Q5TAA0 569 aa17.26■□□□□ 0.35
RER1-207ENST00000488353 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
RER1-207ENST00000488353 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
RER1-207ENST00000488353 ARHGEF10O15013 1369 aa17.26■□□□□ 0.35
RER1-207ENST00000488353 ZNF142P52746 1687 aaPredicted RBP17.26■□□□□ 0.35
RER1-207ENST00000488353 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.354e-7■■■■■ 34.5
RER1-207ENST00000488353 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
RER1-207ENST00000488353 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
RER1-207ENST00000488353 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
RER1-207ENST00000488353 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
RER1-207ENST00000488353 CHL1O00533 1208 aa17.25■□□□□ 0.35
RER1-207ENST00000488353 MEIS3Q99687 375 aa17.25■□□□□ 0.35
RER1-207ENST00000488353 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
RER1-207ENST00000488353 HOXC9P31274 260 aa17.24■□□□□ 0.35
RER1-207ENST00000488353 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
RER1-207ENST00000488353 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
RER1-207ENST00000488353 KIF20AO95235 890 aa17.24■□□□□ 0.35
RER1-207ENST00000488353 MSH6P52701 1360 aa17.23■□□□□ 0.35
RER1-207ENST00000488353 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
RER1-207ENST00000488353 PIBF1Q8WXW3 757 aa17.23■□□□□ 0.35
RER1-207ENST00000488353 SYAP1Q96A49 352 aaPredicted RBP17.23■□□□□ 0.35
RER1-207ENST00000488353 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
RER1-207ENST00000488353 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
RER1-207ENST00000488353 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
RER1-207ENST00000488353 SDSP20132 328 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 SLC4A10Q6U841 1118 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 KIF24Q5T7B8 1368 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 RGS12O14924 1447 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
RER1-207ENST00000488353 ZNF710Q8N1W2 664 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 KDRP35968 1356 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
RER1-207ENST00000488353 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
RER1-207ENST00000488353 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
RER1-207ENST00000488353 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.35
RER1-207ENST00000488353 PSME1Q06323 249 aa17.21■□□□□ 0.34
RER1-207ENST00000488353 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.34
RER1-207ENST00000488353 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.34
RER1-207ENST00000488353 KIF3AQ9Y496 699 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms