RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RGPD5Q99666 1765 aa14.33□□□□□ -0.12
HDLBP-242ENST00000488013 CHL1O00533 1208 aa14.33□□□□□ -0.12
HDLBP-242ENST00000488013 ZNF853P0CG23 659 aa14.33□□□□□ -0.12
HDLBP-242ENST00000488013 CABP4P57796 275 aa14.33□□□□□ -0.12
HDLBP-242ENST00000488013 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
HDLBP-242ENST00000488013 DCTN1Q14203 1278 aa14.32□□□□□ -0.12
HDLBP-242ENST00000488013 TRMT2AQ8IZ69 625 aaKnown RBP14.32□□□□□ -0.12
HDLBP-242ENST00000488013 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-242ENST00000488013 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
HDLBP-242ENST00000488013 ZNF428Q96B54 188 aa14.31□□□□□ -0.12
HDLBP-242ENST00000488013 THUMPD2Q9BTF0 503 aaKnown RBP14.31□□□□□ -0.12
HDLBP-242ENST00000488013 LGR6Q9HBX8 967 aa14.31□□□□□ -0.12
HDLBP-242ENST00000488013 BCL9O00512 1426 aa14.31□□□□□ -0.12
HDLBP-242ENST00000488013 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
HDLBP-242ENST00000488013 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
HDLBP-242ENST00000488013 TMOD3Q9NYL9 352 aa14.3□□□□□ -0.12
HDLBP-242ENST00000488013 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
HDLBP-242ENST00000488013 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
HDLBP-242ENST00000488013 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
HDLBP-242ENST00000488013 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
HDLBP-242ENST00000488013 KRT27Q7Z3Y8 459 aa14.29□□□□□ -0.12
HDLBP-242ENST00000488013 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-242ENST00000488013 CDCA7LQ96GN5 454 aa14.29□□□□□ -0.12
HDLBP-242ENST00000488013 RGS17Q9UGC6 210 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-242ENST00000488013 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-242ENST00000488013 HMGB2P26583 209 aaKnown RBP14.28□□□□□ -0.12
HDLBP-242ENST00000488013 DSG3P32926 999 aa14.28□□□□□ -0.12
HDLBP-242ENST00000488013 PKD1L3Q7Z443 1732 aa14.28□□□□□ -0.12
HDLBP-242ENST00000488013 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
HDLBP-242ENST00000488013 NFATC2IPQ8NCF5 419 aa14.28□□□□□ -0.12
HDLBP-242ENST00000488013 MBIPQ9NS73 344 aa14.28□□□□□ -0.12
HDLBP-242ENST00000488013 FANCIQ9NVI1 1328 aa14.28□□□□□ -0.12
HDLBP-242ENST00000488013 GLI3P10071 1580 aa14.26□□□□□ -0.13
HDLBP-242ENST00000488013 HOXB7P09629 217 aa14.26□□□□□ -0.13
HDLBP-242ENST00000488013 ZNF790Q6PG37 636 aa14.26□□□□□ -0.13
HDLBP-242ENST00000488013 RGPD2P0DJD1 1756 aa14.26□□□□□ -0.13
HDLBP-242ENST00000488013 POTEAQ6S8J7 498 aa14.25□□□□□ -0.13
HDLBP-242ENST00000488013 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
HDLBP-242ENST00000488013 MRC1P22897 1456 aa14.25□□□□□ -0.13
HDLBP-242ENST00000488013 THSD7AQ9UPZ6 1657 aa14.24□□□□□ -0.13
HDLBP-242ENST00000488013 ABCB7O75027 752 aa14.24□□□□□ -0.13
HDLBP-242ENST00000488013 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
HDLBP-242ENST00000488013 TSR2Q969E8 191 aaKnown RBP14.24□□□□□ -0.13
HDLBP-242ENST00000488013 SYTL4Q96C24 671 aaPredicted RBP14.24□□□□□ -0.13
HDLBP-242ENST00000488013 PIGBQ92521 554 aa14.23□□□□□ -0.13
HDLBP-242ENST00000488013 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
HDLBP-242ENST00000488013 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
HDLBP-242ENST00000488013 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
HDLBP-242ENST00000488013 VSIG10Q8N0Z9 540 aa14.22□□□□□ -0.13
HDLBP-242ENST00000488013 TEX13AQ9BXU3 409 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-242ENST00000488013 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-242ENST00000488013 MIS18AQ9NYP9 233 aa14.22□□□□□ -0.13
HDLBP-242ENST00000488013 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.13
HDLBP-242ENST00000488013 TWISTNBQ3B726 338 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-242ENST00000488013 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
HDLBP-242ENST00000488013 LRRC37A3O60309 1634 aa14.21□□□□□ -0.13
HDLBP-242ENST00000488013 ADAMTS7Q9UKP4 1686 aa14.2□□□□□ -0.14
HDLBP-242ENST00000488013 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
HDLBP-242ENST00000488013 VAMP4O75379 141 aa14.19□□□□□ -0.14
HDLBP-242ENST00000488013 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
HDLBP-242ENST00000488013 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
HDLBP-242ENST00000488013 RGS12O14924 1447 aa14.18□□□□□ -0.14
HDLBP-242ENST00000488013 GIGYF1O75420 1035 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-242ENST00000488013 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-242ENST00000488013 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
HDLBP-242ENST00000488013 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
HDLBP-242ENST00000488013 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
HDLBP-242ENST00000488013 STARD3NLO95772 234 aa14.17□□□□□ -0.14
HDLBP-242ENST00000488013 BRPF1P55201 1214 aaPredicted RBP14.17□□□□□ -0.14
HDLBP-242ENST00000488013 SLC39A6Q13433 755 aa14.17□□□□□ -0.14
HDLBP-242ENST00000488013 ZNF496Q96IT1 587 aaPredicted RBP14.17□□□□□ -0.14
HDLBP-242ENST00000488013 STK31Q9BXU1 1019 aa14.17□□□□□ -0.14
HDLBP-242ENST00000488013 WNK3Q9BYP7 1800 aa14.17□□□□□ -0.14
HDLBP-242ENST00000488013 RARSP54136 660 aaKnown RBP14.16□□□□□ -0.14
HDLBP-242ENST00000488013 ASAP1Q9ULH1 1129 aa14.16□□□□□ -0.14
HDLBP-242ENST00000488013 ERBB4Q15303 1308 aa14.15□□□□□ -0.14
HDLBP-242ENST00000488013 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-242ENST00000488013 IPO8O15397 1037 aaKnown RBP14.15□□□□□ -0.14
HDLBP-242ENST00000488013 KCNQ3O43525 872 aa14.15□□□□□ -0.14
HDLBP-242ENST00000488013 KCNQ2O43526 872 aa14.15□□□□□ -0.14
HDLBP-242ENST00000488013 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
HDLBP-242ENST00000488013 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
HDLBP-242ENST00000488013 PALLDQ8WX93 1383 aa14.14□□□□□ -0.15
HDLBP-242ENST00000488013 PTCD1O75127 700 aaKnown RBP14.14□□□□□ -0.15
HDLBP-242ENST00000488013 MS4A1P11836 297 aa14.14□□□□□ -0.15
HDLBP-242ENST00000488013 POLA2Q14181 598 aa14.14□□□□□ -0.15
HDLBP-242ENST00000488013 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
HDLBP-242ENST00000488013 DBF4Q9UBU7 674 aaPredicted RBP14.14□□□□□ -0.15
HDLBP-242ENST00000488013 KIF16BQ96L93 1317 aa14.14□□□□□ -0.15
HDLBP-242ENST00000488013 LOC102724428A0A0B4J2F2 783 aa14.13□□□□□ -0.15
HDLBP-242ENST00000488013 SIK1P57059 783 aa14.13□□□□□ -0.15
HDLBP-242ENST00000488013 SLC27A3Q5K4L6 730 aa14.13□□□□□ -0.15
HDLBP-242ENST00000488013 CCDC125Q86Z20 511 aa14.13□□□□□ -0.15
HDLBP-242ENST00000488013 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
HDLBP-242ENST00000488013 SHANK3Q9BYB0 1731 aa14.12□□□□□ -0.15
HDLBP-242ENST00000488013 SCN11AQ9UI33 1791 aa14.12□□□□□ -0.15
HDLBP-242ENST00000488013 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
HDLBP-242ENST00000488013 TRIM37O94972 964 aa14.12□□□□□ -0.15
HDLBP-242ENST00000488013 FAM182BQ5T319 152 aa14.12□□□□□ -0.15
HDLBP-242ENST00000488013 ARHGAP45Q92619 1136 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms