RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 MYD88Q99836 296 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 GUCY1B3Q02153 619 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 ZNF354CQ86Y25 554 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 HOMER2Q9NSB8 354 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 C6orf229H3BNL8 230 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 SPA17Q15506 151 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 ARHGAP29Q52LW3 1261 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 VAT1LQ9HCJ6 419 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 CFAP45Q9UL16 551 aa17.91■□□□□ 0.46
PKD1-220ENST00000487932 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
PKD1-220ENST00000487932 USP8P40818 1118 aa17.9■□□□□ 0.46
PKD1-220ENST00000487932 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.46
PKD1-220ENST00000487932 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
PKD1-220ENST00000487932 PODXL2Q9NZ53 605 aa17.9■□□□□ 0.46
PKD1-220ENST00000487932 PABPN1LA6NDY0 278 aaKnown RBP17.89■□□□□ 0.45
PKD1-220ENST00000487932 NUP62CLQ9H1M0 184 aa17.89■□□□□ 0.45
PKD1-220ENST00000487932 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
PKD1-220ENST00000487932 CEP63Q96MT8 703 aa17.89■□□□□ 0.45
PKD1-220ENST00000487932 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
PKD1-220ENST00000487932 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
PKD1-220ENST00000487932 IFIT1P09914 478 aaKnown RBP17.89■□□□□ 0.45
PKD1-220ENST00000487932 SERPINA10Q9UK55 444 aa17.89■□□□□ 0.45
PKD1-220ENST00000487932 ERICH4A6NGS2 130 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 MRPS9P82933 396 aaKnown RBP17.88■□□□□ 0.45
PKD1-220ENST00000487932 NGLY1Q96IV0 654 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 NAPBQ9H115 298 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 INCENPQ9NQS7 918 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 FKBP15Q5T1M5 1219 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 MMRN2Q9H8L6 949 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 HOOK3Q86VS8 718 aa17.88■□□□□ 0.45
PKD1-220ENST00000487932 RRBP1Q9P2E9 1410 aaKnown RBP17.88■□□□□ 0.45
PKD1-220ENST00000487932 SMTNL1A8MU46 457 aa17.87■□□□□ 0.45
PKD1-220ENST00000487932 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
PKD1-220ENST00000487932 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
PKD1-220ENST00000487932 K7ELQ4 463 aaPredicted RBP17.87■□□□□ 0.45
PKD1-220ENST00000487932 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
PKD1-220ENST00000487932 BOLA2Q9H3K6 86 aa17.87■□□□□ 0.45
PKD1-220ENST00000487932 AAMPQ13685 434 aa17.86■□□□□ 0.45
PKD1-220ENST00000487932 FERMT3Q86UX7 667 aa17.86■□□□□ 0.45
PKD1-220ENST00000487932 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.86■□□□□ 0.45
PKD1-220ENST00000487932 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
PKD1-220ENST00000487932 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
PKD1-220ENST00000487932 IFFO1Q0D2I5 559 aa17.86■□□□□ 0.45
PKD1-220ENST00000487932 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
PKD1-220ENST00000487932 CCDC7Q96M83 1385 aa17.86■□□□□ 0.45
PKD1-220ENST00000487932 GPTP24298 496 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 EHMT1Q9H9B1 1298 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 NLRP5P59047 1200 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 CCDC83Q8IWF9 413 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 CCDC144CPQ8IYA2 1237 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 AKAP2Q9Y2D5 859 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
PKD1-220ENST00000487932 SMC1AQ14683 1233 aaKnown RBP17.85■□□□□ 0.45
PKD1-220ENST00000487932 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
PKD1-220ENST00000487932 TMEM266Q2M3C6 531 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 LUZP1Q86V48 1076 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 CPLX3Q8WVH0 158 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
PKD1-220ENST00000487932 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
PKD1-220ENST00000487932 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 FYCO1Q9BQS8 1478 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 EXOC6BQ9Y2D4 811 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
PKD1-220ENST00000487932 LMAN1P49257 510 aa17.84■□□□□ 0.45
PKD1-220ENST00000487932 ARL1P40616 181 aaPredicted RBP17.83■□□□□ 0.45
PKD1-220ENST00000487932 TCERG1LQ5VWI1 586 aa17.83■□□□□ 0.45
PKD1-220ENST00000487932 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.45
PKD1-220ENST00000487932 KRT32Q14532 448 aa17.83■□□□□ 0.45
PKD1-220ENST00000487932 BICD1Q96G01 975 aa17.83■□□□□ 0.44
PKD1-220ENST00000487932 SLC5A1P13866 664 aa17.83■□□□□ 0.44
PKD1-220ENST00000487932 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
PKD1-220ENST00000487932 SYCP3Q8IZU3 236 aa17.83■□□□□ 0.44
PKD1-220ENST00000487932 SSX2IPQ9Y2D8 614 aa17.83■□□□□ 0.44
PKD1-220ENST00000487932 PRPF4BQ13523 1007 aaKnown RBP17.82■□□□□ 0.44
PKD1-220ENST00000487932 VPS36Q86VN1 386 aa17.82■□□□□ 0.44
PKD1-220ENST00000487932 PRC1O43663 620 aa17.82■□□□□ 0.44
PKD1-220ENST00000487932 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
PKD1-220ENST00000487932 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
PKD1-220ENST00000487932 MCM10Q7L590 875 aa17.82■□□□□ 0.44
PKD1-220ENST00000487932 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
PKD1-220ENST00000487932 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
PKD1-220ENST00000487932 CASQ1P31415 396 aa17.81■□□□□ 0.44
PKD1-220ENST00000487932 MAP3K12Q12852 859 aa17.81■□□□□ 0.44
PKD1-220ENST00000487932 CRACR2AQ9BSW2 395 aa17.81■□□□□ 0.44
PKD1-220ENST00000487932 BAG4O95429 457 aaKnown RBP17.81■□□□□ 0.44
PKD1-220ENST00000487932 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
PKD1-220ENST00000487932 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
PKD1-220ENST00000487932 MTERF4Q7Z6M4 381 aaKnown RBP17.81■□□□□ 0.44
PKD1-220ENST00000487932 PRKCSHP14314 528 aaPredicted RBP17.8■□□□□ 0.44
PKD1-220ENST00000487932 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 CCDC8Q9H0W5 538 aaPredicted RBP17.8■□□□□ 0.44
PKD1-220ENST00000487932 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 TMCO5BA8MYB1 307 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
PKD1-220ENST00000487932 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 CKAP2LQ8IYA6 745 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 KIF20AO95235 890 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
PKD1-220ENST00000487932 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms