RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 LGR6Q9HBX8 967 aa29.94■■■□□ 2.38
CDHR3-212ENST00000487084 RNMTO43148 476 aaKnown RBP29.93■■■□□ 2.38
CDHR3-212ENST00000487084 MSH5O43196 834 aa29.93■■■□□ 2.38
CDHR3-212ENST00000487084 RALBP1Q15311 655 aa29.93■■■□□ 2.38
CDHR3-212ENST00000487084 GAS2L2Q8NHY3 880 aa29.93■■■□□ 2.38
CDHR3-212ENST00000487084 AK7Q96M32 723 aa29.93■■■□□ 2.38
CDHR3-212ENST00000487084 TUBGCP6Q96RT7 1819 aa29.92■■■□□ 2.38
CDHR3-212ENST00000487084 LINC00116Q8NCU8 138 aa29.91■■■□□ 2.38
CDHR3-212ENST00000487084 SCN11AQ9UI33 1791 aa29.9■■■□□ 2.38
CDHR3-212ENST00000487084 TAF1LQ8IZX4 1826 aa29.9■■■□□ 2.38
CDHR3-212ENST00000487084 ITPK1Q13572 414 aa29.9■■■□□ 2.38
CDHR3-212ENST00000487084 SLC52A2Q9HAB3 445 aa29.9■■■□□ 2.38
CDHR3-212ENST00000487084 QSER1Q2KHR3 1735 aa29.9■■■□□ 2.38
CDHR3-212ENST00000487084 C4BP0C0L5 1744 aa29.89■■■□□ 2.38
CDHR3-212ENST00000487084 PTGER2P43116 358 aa29.89■■■□□ 2.38
CDHR3-212ENST00000487084 PHACTR3Q96KR7 559 aa29.89■■■□□ 2.38
CDHR3-212ENST00000487084 MAP3K5Q99683 1374 aa29.89■■■□□ 2.37
CDHR3-212ENST00000487084 PTCD1O75127 700 aaKnown RBP29.87■■■□□ 2.37
CDHR3-212ENST00000487084 COL23A1Q86Y22 540 aaPredicted RBP29.87■■■□□ 2.37
CDHR3-212ENST00000487084 GNAT3A8MTJ3 354 aa29.86■■■□□ 2.37
CDHR3-212ENST00000487084 FCHSD2O94868 740 aa29.86■■■□□ 2.37
CDHR3-212ENST00000487084 PHF14O94880 888 aa29.86■■■□□ 2.37
CDHR3-212ENST00000487084 SLC16A10Q8TF71 515 aa29.86■■■□□ 2.37
CDHR3-212ENST00000487084 SLC4A9Q96Q91 983 aa29.85■■■□□ 2.37
CDHR3-212ENST00000487084 MRC1P22897 1456 aa29.85■■■□□ 2.37
CDHR3-212ENST00000487084 FLAD1Q8NFF5 587 aa29.83■■■□□ 2.37
CDHR3-212ENST00000487084 MYBBP1AQ9BQG0 1328 aaKnown RBP29.82■■■□□ 2.36
CDHR3-212ENST00000487084 GNPATO15228 680 aa29.82■■■□□ 2.36
CDHR3-212ENST00000487084 SMIM5Q71RC9 77 aa29.82■■■□□ 2.36
CDHR3-212ENST00000487084 SLC39A6Q13433 755 aa29.81■■■□□ 2.36
CDHR3-212ENST00000487084 AMIGO3Q86WK7 504 aa29.81■■■□□ 2.36
CDHR3-212ENST00000487084 SGIP1Q9BQI5 828 aa29.81■■■□□ 2.36
CDHR3-212ENST00000487084 ADAMTS7Q9UKP4 1686 aa29.8■■■□□ 2.36
CDHR3-212ENST00000487084 POLD1P28340 1107 aa29.8■■■□□ 2.36
CDHR3-212ENST00000487084 TEFQ10587 303 aa29.8■■■□□ 2.36
CDHR3-212ENST00000487084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.79■■■□□ 2.36
CDHR3-212ENST00000487084 NEFMP07197 916 aa29.79■■■□□ 2.36
CDHR3-212ENST00000487084 MSL1Q68DK7 614 aa29.79■■■□□ 2.36
CDHR3-212ENST00000487084 IL17REQ8NFR9 667 aa29.79■■■□□ 2.36
CDHR3-212ENST00000487084 VIRMAQ69YN4 1812 aaKnown RBP29.79■■■□□ 2.36
CDHR3-212ENST00000487084 ARXQ96QS3 562 aa29.78■■■□□ 2.36
CDHR3-212ENST00000487084 SSFA2P28290 1259 aa29.77■■■□□ 2.36
CDHR3-212ENST00000487084 RTF1Q92541 710 aaKnown RBP29.76■■■□□ 2.35
CDHR3-212ENST00000487084 UBR3Q6ZT12 1888 aa29.76■■■□□ 2.35
CDHR3-212ENST00000487084 ZNF831Q5JPB2 1677 aa29.76■■■□□ 2.35
CDHR3-212ENST00000487084 TTC5Q8N0Z6 440 aa29.74■■■□□ 2.35
CDHR3-212ENST00000487084 FHDC1Q9C0D6 1143 aaPredicted RBP29.74■■■□□ 2.35
CDHR3-212ENST00000487084 RTCBQ9Y3I0 505 aaKnown RBP29.74■■■□□ 2.35
CDHR3-212ENST00000487084 CNTNAP4Q9C0A0 1308 aa29.73■■■□□ 2.35
CDHR3-212ENST00000487084 ZNF316A6NFI3 1004 aaPredicted RBP29.73■■■□□ 2.35
CDHR3-212ENST00000487084 KLHL34Q8N239 644 aa29.73■■■□□ 2.35
CDHR3-212ENST00000487084 PRKRIP1Q9H875 184 aaPredicted RBP29.73■■■□□ 2.35
CDHR3-212ENST00000487084 RC3H1Q5TC82 1133 aaKnown RBP29.72■■■□□ 2.35
CDHR3-212ENST00000487084 MCM10Q7L590 875 aa29.72■■■□□ 2.35
CDHR3-212ENST00000487084 COL5A3P25940 1745 aaPredicted RBP29.71■■■□□ 2.35
CDHR3-212ENST00000487084 PNNQ9H307 717 aaKnown RBP29.71■■■□□ 2.35
CDHR3-212ENST00000487084 CEMIPQ8WUJ3 1361 aa29.71■■■□□ 2.35
CDHR3-212ENST00000487084 MAPK8IP3Q9UPT6 1336 aa29.71■■■□□ 2.35
CDHR3-212ENST00000487084 CRKLP46109 303 aaKnown RBP29.7■■■□□ 2.35
CDHR3-212ENST00000487084 DNAJC10Q8IXB1 793 aa29.7■■■□□ 2.35
CDHR3-212ENST00000487084 KCPQ6ZWJ8 1503 aa29.7■■■□□ 2.34
CDHR3-212ENST00000487084 TJP1Q07157 1748 aa29.69■■■□□ 2.34
CDHR3-212ENST00000487084 DCTN1Q14203 1278 aa29.69■■■□□ 2.34
CDHR3-212ENST00000487084 TRAPPC3LQ5T215 181 aa29.69■■■□□ 2.34
CDHR3-212ENST00000487084 PLEKHF1Q96S99 279 aa29.69■■■□□ 2.34
CDHR3-212ENST00000487084 SYT17Q9BSW7 474 aa29.67■■■□□ 2.34
CDHR3-212ENST00000487084 COL24A1Q17RW2 1714 aa29.66■■■□□ 2.34
CDHR3-212ENST00000487084 BTBD11A6QL63 1104 aa29.66■■■□□ 2.34
CDHR3-212ENST00000487084 RPS6KA4O75676 772 aa29.66■■■□□ 2.34
CDHR3-212ENST00000487084 ZNF790Q6PG37 636 aa29.66■■■□□ 2.34
CDHR3-212ENST00000487084 HTATSF1O43719 755 aaKnown RBP29.65■■■□□ 2.34
CDHR3-212ENST00000487084 CICQ96RK0 1608 aaPredicted RBP29.64■■■□□ 2.34
CDHR3-212ENST00000487084 ADRA2BP18089 450 aa29.64■■■□□ 2.34
CDHR3-212ENST00000487084 WDR43Q15061 677 aaKnown RBP eCLIP29.64■■■□□ 2.34
CDHR3-212ENST00000487084 NFE2L2Q16236 605 aa29.64■■■□□ 2.34
CDHR3-212ENST00000487084 SIPA1L3O60292 1781 aaPredicted RBP29.63■■■□□ 2.33
CDHR3-212ENST00000487084 VSIG10Q8N0Z9 540 aa29.63■■■□□ 2.33
CDHR3-212ENST00000487084 ARHGEF1Q92888 912 aaKnown RBP29.63■■■□□ 2.33
CDHR3-212ENST00000487084 ZNF496Q96IT1 587 aaPredicted RBP29.63■■■□□ 2.33
CDHR3-212ENST00000487084 CCDC87Q9NVE4 849 aa29.63■■■□□ 2.33
CDHR3-212ENST00000487084 DCAF8L1A6NGE4 600 aa29.62■■■□□ 2.33
CDHR3-212ENST00000487084 RFC4P35249 363 aa29.62■■■□□ 2.33
CDHR3-212ENST00000487084 INTS5Q6P9B9 1019 aaKnown RBP29.62■■■□□ 2.33
CDHR3-212ENST00000487084 MYH14Q7Z406 1995 aaKnown RBP29.62■■■□□ 2.33
CDHR3-212ENST00000487084 UBR2Q8IWV8 1755 aa29.62■■■□□ 2.33
CDHR3-212ENST00000487084 CYP19A1P11511 503 aaPredicted RBP29.61■■■□□ 2.33
CDHR3-212ENST00000487084 KCNQ3O43525 872 aa29.6■■■□□ 2.33
CDHR3-212ENST00000487084 FMNL2Q96PY5 1086 aa29.6■■■□□ 2.33
CDHR3-212ENST00000487084 HEG1Q9ULI3 1381 aa29.59■■■□□ 2.33
CDHR3-212ENST00000487084 CCDC146Q8IYE0 955 aa29.58■■■□□ 2.33
CDHR3-212ENST00000487084 STARD3NLO95772 234 aa29.56■■■□□ 2.32
CDHR3-212ENST00000487084 ZBTB1Q9Y2K1 713 aa29.56■■■□□ 2.32
CDHR3-212ENST00000487084 TAF7Q15545 349 aaPredicted RBP29.55■■■□□ 2.32
CDHR3-212ENST00000487084 THUMPD2Q9BTF0 503 aaKnown RBP29.55■■■□□ 2.32
CDHR3-212ENST00000487084 SRP68Q9UHB9 627 aaKnown RBP29.55■■■□□ 2.32
CDHR3-212ENST00000487084 DLG5Q8TDM6 1919 aa29.55■■■□□ 2.32
CDHR3-212ENST00000487084 SOS1Q07889 1333 aaPredicted RBP29.54■■■□□ 2.32
CDHR3-212ENST00000487084 CANXP27824 592 aaKnown RBP29.54■■■□□ 2.32
CDHR3-212ENST00000487084 MMP10P09238 476 aa29.53■■■□□ 2.32
CDHR3-212ENST00000487084 GYS1P13807 737 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms