RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 CABP4P57796 275 aa26.55■■□□□ 1.84
TNFRSF18-204ENST00000486728 COL24A1Q17RW2 1714 aa26.54■■□□□ 1.84
TNFRSF18-204ENST00000486728 ATG3Q9NT62 314 aa26.54■■□□□ 1.84
TNFRSF18-204ENST00000486728 KDM6AO15550 1401 aaPredicted RBP26.54■■□□□ 1.84
TNFRSF18-204ENST00000486728 SCN11AQ9UI33 1791 aa26.53■■□□□ 1.84
TNFRSF18-204ENST00000486728 ATP6V1AP38606 617 aa26.53■■□□□ 1.84
TNFRSF18-204ENST00000486728 SSFA2P28290 1259 aa26.51■■□□□ 1.83
TNFRSF18-204ENST00000486728 AKAP4Q5JQC9 854 aa26.51■■□□□ 1.83
TNFRSF18-204ENST00000486728 UBR3Q6ZT12 1888 aa26.49■■□□□ 1.83
TNFRSF18-204ENST00000486728 LINC00116Q8NCU8 138 aa26.48■■□□□ 1.83
TNFRSF18-204ENST00000486728 KLHL34Q8N239 644 aa26.47■■□□□ 1.83
TNFRSF18-204ENST00000486728 CFAP53Q96M91 514 aa26.47■■□□□ 1.83
TNFRSF18-204ENST00000486728 RBM42Q9BTD8 480 aaKnown RBP26.47■■□□□ 1.83
TNFRSF18-204ENST00000486728 ZNF831Q5JPB2 1677 aa26.47■■□□□ 1.83
TNFRSF18-204ENST00000486728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.46■■□□□ 1.83
TNFRSF18-204ENST00000486728 U2SURPO15042 1029 aaKnown RBP26.46■■□□□ 1.83
TNFRSF18-204ENST00000486728 PHF14O94880 888 aa26.46■■□□□ 1.83
TNFRSF18-204ENST00000486728 ITPK1Q13572 414 aa26.46■■□□□ 1.83
TNFRSF18-204ENST00000486728 GNPATO15228 680 aa26.45■■□□□ 1.82
TNFRSF18-204ENST00000486728 YY1P25490 414 aa26.45■■□□□ 1.82
TNFRSF18-204ENST00000486728 PPP2R1AP30153 589 aa26.45■■□□□ 1.82
TNFRSF18-204ENST00000486728 MSL1Q68DK7 614 aa26.44■■□□□ 1.82
TNFRSF18-204ENST00000486728 MTHFSDQ2M296 383 aaKnown RBP26.43■■□□□ 1.82
TNFRSF18-204ENST00000486728 SMIM5Q71RC9 77 aa26.43■■□□□ 1.82
TNFRSF18-204ENST00000486728 AMIGO3Q86WK7 504 aa26.43■■□□□ 1.82
TNFRSF18-204ENST00000486728 NFATC2IPQ8NCF5 419 aa26.43■■□□□ 1.82
TNFRSF18-204ENST00000486728 LGR6Q9HBX8 967 aa26.42■■□□□ 1.82
TNFRSF18-204ENST00000486728 RC3H1Q5TC82 1133 aaKnown RBP26.41■■□□□ 1.82
TNFRSF18-204ENST00000486728 SLC4A9Q96Q91 983 aa26.41■■□□□ 1.82
TNFRSF18-204ENST00000486728 RTCBQ9Y3I0 505 aaKnown RBP26.41■■□□□ 1.82
TNFRSF18-204ENST00000486728 CNTNAP4Q9C0A0 1308 aa26.4■■□□□ 1.82
TNFRSF18-204ENST00000486728 COL5A3P25940 1745 aaPredicted RBP26.4■■□□□ 1.82
TNFRSF18-204ENST00000486728 SLC52A2Q9HAB3 445 aa26.4■■□□□ 1.82
TNFRSF18-204ENST00000486728 ADAMTS7Q9UKP4 1686 aa26.39■■□□□ 1.82
TNFRSF18-204ENST00000486728 ADRA2BP18089 450 aa26.39■■□□□ 1.82
TNFRSF18-204ENST00000486728 NUDCQ9Y266 331 aa26.39■■□□□ 1.82
TNFRSF18-204ENST00000486728 MRC1P22897 1456 aa26.38■■□□□ 1.81
TNFRSF18-204ENST00000486728 RNMTO43148 476 aaKnown RBP26.38■■□□□ 1.81
TNFRSF18-204ENST00000486728 PTCD1O75127 700 aaKnown RBP26.37■■□□□ 1.81
TNFRSF18-204ENST00000486728 GPR162Q16538 588 aa26.37■■□□□ 1.81
TNFRSF18-204ENST00000486728 TRAPPC3LQ5T215 181 aa26.37■■□□□ 1.81
TNFRSF18-204ENST00000486728 GAS2L2Q8NHY3 880 aa26.37■■□□□ 1.81
TNFRSF18-204ENST00000486728 CD2APQ9Y5K6 639 aa26.36■■□□□ 1.81
TNFRSF18-204ENST00000486728 MYH14Q7Z406 1995 aaKnown RBP26.35■■□□□ 1.81
TNFRSF18-204ENST00000486728 TJP1Q07157 1748 aa26.34■■□□□ 1.81
TNFRSF18-204ENST00000486728 RPS6KA4O75676 772 aa26.33■■□□□ 1.81
TNFRSF18-204ENST00000486728 CICQ96RK0 1608 aaPredicted RBP26.32■■□□□ 1.8
TNFRSF18-204ENST00000486728 NLGN2Q8NFZ4 835 aa26.32■■□□□ 1.8
TNFRSF18-204ENST00000486728 PHACTR3Q96KR7 559 aa26.32■■□□□ 1.8
TNFRSF18-204ENST00000486728 RSPH6AQ9H0K4 717 aa26.32■■□□□ 1.8
TNFRSF18-204ENST00000486728 PRKAR2BP31323 418 aa26.31■■□□□ 1.8
TNFRSF18-204ENST00000486728 DDX10Q13206 875 aaKnown RBP26.31■■□□□ 1.8
TNFRSF18-204ENST00000486728 PELP1Q8IZL8 1130 aaKnown RBP26.31■■□□□ 1.8
TNFRSF18-204ENST00000486728 GNAT3A8MTJ3 354 aa26.3■■□□□ 1.8
TNFRSF18-204ENST00000486728 RFC4P35249 363 aa26.3■■□□□ 1.8
TNFRSF18-204ENST00000486728 NLGN1Q8N2Q7 840 aa26.3■■□□□ 1.8
TNFRSF18-204ENST00000486728 SIPA1L3O60292 1781 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF18-204ENST00000486728 U2AF1L5P0DN76 240 aaPredicted RBP26.29■■□□□ 1.8
TNFRSF18-204ENST00000486728 CRKLP46109 303 aaKnown RBP26.29■■□□□ 1.8
TNFRSF18-204ENST00000486728 U2AF1Q01081 240 aaKnown RBP eCLIP26.29■■□□□ 1.8
TNFRSF18-204ENST00000486728 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
TNFRSF18-204ENST00000486728 ARHGEF1Q92888 912 aaKnown RBP26.28■■□□□ 1.8
TNFRSF18-204ENST00000486728 GRIN3BO60391 1043 aa26.27■■□□□ 1.8
TNFRSF18-204ENST00000486728 TEFQ10587 303 aa26.27■■□□□ 1.8
TNFRSF18-204ENST00000486728 TTC5Q8N0Z6 440 aa26.27■■□□□ 1.8
TNFRSF18-204ENST00000486728 UTRNP46939 3433 aa26.26■■□□□ 1.79
TNFRSF18-204ENST00000486728 UBR2Q8IWV8 1755 aa26.26■■□□□ 1.79
TNFRSF18-204ENST00000486728 VSIG10Q8N0Z9 540 aa26.26■■□□□ 1.79
TNFRSF18-204ENST00000486728 IL17REQ8NFR9 667 aa26.26■■□□□ 1.79
TNFRSF18-204ENST00000486728 C4AP0C0L4 1744 aa26.25■■□□□ 1.79
TNFRSF18-204ENST00000486728 KCPQ6ZWJ8 1503 aa26.24■■□□□ 1.79
TNFRSF18-204ENST00000486728 FCHSD2O94868 740 aa26.24■■□□□ 1.79
TNFRSF18-204ENST00000486728 MMP10P09238 476 aa26.24■■□□□ 1.79
TNFRSF18-204ENST00000486728 CHD4Q14839 1912 aa26.24■■□□□ 1.79
TNFRSF18-204ENST00000486728 CCDC87Q9NVE4 849 aa26.23■■□□□ 1.79
TNFRSF18-204ENST00000486728 DLG5Q8TDM6 1919 aa26.22■■□□□ 1.79
TNFRSF18-204ENST00000486728 GYS1P13807 737 aa26.22■■□□□ 1.79
TNFRSF18-204ENST00000486728 DNAJC10Q8IXB1 793 aa26.22■■□□□ 1.79
TNFRSF18-204ENST00000486728 NEFMP07197 916 aa26.21■■□□□ 1.79
TNFRSF18-204ENST00000486728 RTF1Q92541 710 aaKnown RBP26.2■■□□□ 1.78
TNFRSF18-204ENST00000486728 PARP3Q9Y6F1 533 aa26.2■■□□□ 1.78
TNFRSF18-204ENST00000486728 CYP19A1P11511 503 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF18-204ENST00000486728 INTS5Q6P9B9 1019 aaKnown RBP26.19■■□□□ 1.78
TNFRSF18-204ENST00000486728 CEMIPQ8WUJ3 1361 aa26.19■■□□□ 1.78
TNFRSF18-204ENST00000486728 USP42Q9H9J4 1324 aaKnown RBP26.18■■□□□ 1.78
TNFRSF18-204ENST00000486728 STARD3NLO95772 234 aa26.17■■□□□ 1.78
TNFRSF18-204ENST00000486728 YBX3P16989 372 aaKnown RBP eCLIP26.17■■□□□ 1.78
TNFRSF18-204ENST00000486728 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
TNFRSF18-204ENST00000486728 TEX13AQ9BXU3 409 aaPredicted RBP26.17■■□□□ 1.78
TNFRSF18-204ENST00000486728 SOS1Q07889 1333 aaPredicted RBP26.16■■□□□ 1.78
TNFRSF18-204ENST00000486728 ZPR1O75312 459 aa26.16■■□□□ 1.78
TNFRSF18-204ENST00000486728 RALBP1Q15311 655 aa26.16■■□□□ 1.78
TNFRSF18-204ENST00000486728 TGFB2P61812 414 aa26.15■■□□□ 1.78
TNFRSF18-204ENST00000486728 HTATSF1O43719 755 aaKnown RBP26.14■■□□□ 1.78
TNFRSF18-204ENST00000486728 MCM10Q7L590 875 aa26.14■■□□□ 1.78
TNFRSF18-204ENST00000486728 ZNF784Q8NCA9 323 aaPredicted RBP26.14■■□□□ 1.78
TNFRSF18-204ENST00000486728 FMNL2Q96PY5 1086 aa26.14■■□□□ 1.78
TNFRSF18-204ENST00000486728 PNNQ9H307 717 aaKnown RBP26.14■■□□□ 1.78
TNFRSF18-204ENST00000486728 C10orf71Q711Q0 1435 aa26.14■■□□□ 1.77
TNFRSF18-204ENST00000486728 COL15A1P39059 1388 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms