RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 EVC2Q86UK5 1308 aa8.65□□□□□ -1.02
PDZD11-204ENST00000486461 LMNB1P20700 586 aa8.65□□□□□ -1.02
PDZD11-204ENST00000486461 MAP2K1Q02750 393 aaPredicted RBP8.65□□□□□ -1.02
PDZD11-204ENST00000486461 RASSF7Q02833 373 aa8.65□□□□□ -1.02
PDZD11-204ENST00000486461 DPY19L2Q6NUT2 758 aa8.65□□□□□ -1.02
PDZD11-204ENST00000486461 LINC00116Q8NCU8 138 aa8.65□□□□□ -1.02
PDZD11-204ENST00000486461 IP6K1Q92551 441 aa8.65□□□□□ -1.02
PDZD11-204ENST00000486461 C4AP0C0L4 1744 aa8.65□□□□□ -1.03
PDZD11-204ENST00000486461 MEGF6O75095 1541 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 POTECB2RU33 542 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 SIK1P57059 783 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 NME9Q86XW9 330 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 CCDC88AQ3V6T2 1871 aa8.64□□□□□ -1.03
PDZD11-204ENST00000486461 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
PDZD11-204ENST00000486461 CGNL1Q0VF96 1302 aa8.63□□□□□ -1.03
PDZD11-204ENST00000486461 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
PDZD11-204ENST00000486461 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
PDZD11-204ENST00000486461 ITGB4P16144 1822 aa8.63□□□□□ -1.03
PDZD11-204ENST00000486461 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
PDZD11-204ENST00000486461 PCDH11XQ9BZA7 1347 aa8.62□□□□□ -1.03
PDZD11-204ENST00000486461 PCDH11YQ9BZA8 1340 aa8.62□□□□□ -1.03
PDZD11-204ENST00000486461 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
PDZD11-204ENST00000486461 RAPGEF4Q8WZA2 1011 aa8.62□□□□□ -1.03
PDZD11-204ENST00000486461 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
PDZD11-204ENST00000486461 TIAM2Q8IVF5 1701 aa8.62□□□□□ -1.03
PDZD11-204ENST00000486461 PASKQ96RG2 1323 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 MON2Q7Z3U7 1717 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 GYS1P13807 737 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
PDZD11-204ENST00000486461 CHRNA5P30532 468 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 DEFB115Q30KQ5 88 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
PDZD11-204ENST00000486461 PIGBQ92521 554 aa8.61□□□□□ -1.03
PDZD11-204ENST00000486461 POTEIP0CG38 1075 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 POTEJP0CG39 1038 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 ADRA2BP18089 450 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 RFC4P35249 363 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 AMPHP49418 695 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 ITPK1Q13572 414 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
PDZD11-204ENST00000486461 MCOLN1Q9GZU1 580 aa8.6□□□□□ -1.03
PDZD11-204ENST00000486461 WDR33Q9C0J8 1336 aaKnown RBP8.59□□□□□ -1.03
PDZD11-204ENST00000486461 RASSF10A6NK89 507 aa8.59□□□□□ -1.03
PDZD11-204ENST00000486461 HOXC9P31274 260 aa8.59□□□□□ -1.03
PDZD11-204ENST00000486461 TNRC18O15417 2968 aaPredicted RBP8.58□□□□□ -1.04
PDZD11-204ENST00000486461 CD163L1Q9NR16 1453 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 CYP27B1O15528 508 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 NBPF6Q5VWK0 638 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 USHBP1Q8N6Y0 703 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 NBPF4Q96M43 638 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 SBNO2Q9Y2G9 1366 aa8.58□□□□□ -1.04
PDZD11-204ENST00000486461 MAP3K19Q56UN5 1328 aa8.57□□□□□ -1.04
PDZD11-204ENST00000486461 ERFEQ4G0M1 354 aa8.57□□□□□ -1.04
PDZD11-204ENST00000486461 TMOD3Q9NYL9 352 aa8.57□□□□□ -1.04
PDZD11-204ENST00000486461 ASAP1Q9ULH1 1129 aa8.57□□□□□ -1.04
PDZD11-204ENST00000486461 CASP8AP2Q9UKL3 1982 aa8.57□□□□□ -1.04
PDZD11-204ENST00000486461 DICER1Q9UPY3 1922 aaKnown RBP8.56□□□□□ -1.04
PDZD11-204ENST00000486461 IQCA1LA6NCM1 817 aa8.56□□□□□ -1.04
PDZD11-204ENST00000486461 NFKBIEO00221 500 aa8.56□□□□□ -1.04
PDZD11-204ENST00000486461 RPS6KA4O75676 772 aa8.56□□□□□ -1.04
PDZD11-204ENST00000486461 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
PDZD11-204ENST00000486461 DDR1Q08345 913 aa8.56□□□□□ -1.04
PDZD11-204ENST00000486461 RC3H1Q5TC82 1133 aaKnown RBP8.56□□□□□ -1.04
PDZD11-204ENST00000486461 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
PDZD11-204ENST00000486461 TSKSQ9UJT2 592 aa8.56□□□□□ -1.04
PDZD11-204ENST00000486461 ABT1Q9ULW3 272 aaKnown RBP8.56□□□□□ -1.04
PDZD11-204ENST00000486461 DDNO94850 711 aaPredicted RBP8.55□□□□□ -1.04
PDZD11-204ENST00000486461 ECE1P42892 770 aa8.55□□□□□ -1.04
PDZD11-204ENST00000486461 DGKZQ13574 1117 aa8.55□□□□□ -1.04
PDZD11-204ENST00000486461 PAXIP1Q6ZW49 1069 aaPredicted RBP8.55□□□□□ -1.04
PDZD11-204ENST00000486461 TTLL6Q8N841 843 aa8.55□□□□□ -1.04
PDZD11-204ENST00000486461 EDC4Q6P2E9 1401 aaKnown RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 SMG6Q86US8 1419 aaKnown RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 FKBP8Q14318 412 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 NKX1-1Q15270 411 aaPredicted RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 GCC1Q96CN9 775 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 CAPNS2Q96L46 248 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 GPR101Q96P66 508 aaPredicted RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 TAF1DQ9H5J8 278 aaPredicted RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 ZNF219Q9P2Y4 722 aaPredicted RBP8.54□□□□□ -1.04
PDZD11-204ENST00000486461 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 SCN4AP35499 1836 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
PDZD11-204ENST00000486461 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
PDZD11-204ENST00000486461 SOX10P56693 466 aa8.53□□□□□ -1.04
PDZD11-204ENST00000486461 GRM1Q13255 1194 aa8.53□□□□□ -1.04
PDZD11-204ENST00000486461 COG3Q96JB2 828 aa8.53□□□□□ -1.04
PDZD11-204ENST00000486461 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
PDZD11-204ENST00000486461 SRP68Q9UHB9 627 aaKnown RBP8.53□□□□□ -1.04
PDZD11-204ENST00000486461 RTL1A6NKG5 1358 aa8.52□□□□□ -1.05
PDZD11-204ENST00000486461 MYH14Q7Z406 1995 aaKnown RBP8.52□□□□□ -1.05
PDZD11-204ENST00000486461 THSD7BQ9C0I4 1608 aa8.52□□□□□ -1.05
PDZD11-204ENST00000486461 CA12O43570 354 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms