RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 LGR6Q9HBX8 967 aa16.56■□□□□ 0.24
HMG20B-211ENST00000486028 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
HMG20B-211ENST00000486028 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
HMG20B-211ENST00000486028 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
HMG20B-211ENST00000486028 ITGB4P16144 1822 aa16.54■□□□□ 0.24
HMG20B-211ENST00000486028 FKBP8Q14318 412 aa16.54■□□□□ 0.24
HMG20B-211ENST00000486028 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
HMG20B-211ENST00000486028 LOC102724428A0A0B4J2F2 783 aa16.53■□□□□ 0.24
HMG20B-211ENST00000486028 SIK1P57059 783 aa16.53■□□□□ 0.24
HMG20B-211ENST00000486028 SLC52A2Q9HAB3 445 aa16.53■□□□□ 0.24
HMG20B-211ENST00000486028 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
HMG20B-211ENST00000486028 ANP32CO43423 234 aa16.51■□□□□ 0.23
HMG20B-211ENST00000486028 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
HMG20B-211ENST00000486028 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
HMG20B-211ENST00000486028 RTF1Q92541 710 aaKnown RBP16.51■□□□□ 0.23
HMG20B-211ENST00000486028 TEFQ10587 303 aa16.5■□□□□ 0.23
HMG20B-211ENST00000486028 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
HMG20B-211ENST00000486028 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
HMG20B-211ENST00000486028 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
HMG20B-211ENST00000486028 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
HMG20B-211ENST00000486028 LY75O60449 1722 aa16.5■□□□□ 0.23
HMG20B-211ENST00000486028 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
HMG20B-211ENST00000486028 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
HMG20B-211ENST00000486028 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
HMG20B-211ENST00000486028 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
HMG20B-211ENST00000486028 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
HMG20B-211ENST00000486028 SRCAPQ6ZRS2 3230 aa16.47■□□□□ 0.23
HMG20B-211ENST00000486028 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
HMG20B-211ENST00000486028 PAPPAQ13219 1627 aa16.47■□□□□ 0.23
HMG20B-211ENST00000486028 ITPK1Q13572 414 aa16.46■□□□□ 0.23
HMG20B-211ENST00000486028 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
HMG20B-211ENST00000486028 AK7Q96M32 723 aa16.46■□□□□ 0.23
HMG20B-211ENST00000486028 SPON1Q9HCB6 807 aa16.46■□□□□ 0.23
HMG20B-211ENST00000486028 SLC39A6Q13433 755 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 MCM10Q7L590 875 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 LINC00116Q8NCU8 138 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 MRC1P22897 1456 aa16.45■□□□□ 0.22
HMG20B-211ENST00000486028 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
HMG20B-211ENST00000486028 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
HMG20B-211ENST00000486028 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
HMG20B-211ENST00000486028 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
HMG20B-211ENST00000486028 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
HMG20B-211ENST00000486028 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
HMG20B-211ENST00000486028 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
HMG20B-211ENST00000486028 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
HMG20B-211ENST00000486028 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
HMG20B-211ENST00000486028 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
HMG20B-211ENST00000486028 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
HMG20B-211ENST00000486028 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
HMG20B-211ENST00000486028 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
HMG20B-211ENST00000486028 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
HMG20B-211ENST00000486028 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
HMG20B-211ENST00000486028 RIPK4P57078 832 aa16.41■□□□□ 0.22
HMG20B-211ENST00000486028 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
HMG20B-211ENST00000486028 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
HMG20B-211ENST00000486028 C5P01031 1676 aa16.4■□□□□ 0.22
HMG20B-211ENST00000486028 GNPATO15228 680 aa16.4■□□□□ 0.22
HMG20B-211ENST00000486028 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
HMG20B-211ENST00000486028 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
HMG20B-211ENST00000486028 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
HMG20B-211ENST00000486028 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
HMG20B-211ENST00000486028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
HMG20B-211ENST00000486028 SSFA2P28290 1259 aa16.39■□□□□ 0.21
HMG20B-211ENST00000486028 CCDC184Q52MB2 194 aa16.39■□□□□ 0.21
HMG20B-211ENST00000486028 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
HMG20B-211ENST00000486028 PPP1R1BQ9UD71 204 aaPredicted RBP16.39■□□□□ 0.21
HMG20B-211ENST00000486028 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
HMG20B-211ENST00000486028 TAF1LQ8IZX4 1826 aa16.39■□□□□ 0.21
HMG20B-211ENST00000486028 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
HMG20B-211ENST00000486028 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 LRP5O75197 1615 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 ZNF831Q5JPB2 1677 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 PHF14O94880 888 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
HMG20B-211ENST00000486028 ZNF496Q96IT1 587 aaPredicted RBP16.38■□□□□ 0.21
HMG20B-211ENST00000486028 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
HMG20B-211ENST00000486028 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
HMG20B-211ENST00000486028 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
HMG20B-211ENST00000486028 STARD3NLO95772 234 aa16.37■□□□□ 0.21
HMG20B-211ENST00000486028 CRKLP46109 303 aaKnown RBP16.37■□□□□ 0.21
HMG20B-211ENST00000486028 TRAPPC3LQ5T215 181 aa16.37■□□□□ 0.21
HMG20B-211ENST00000486028 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
HMG20B-211ENST00000486028 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
HMG20B-211ENST00000486028 KCNQ3O43525 872 aa16.36■□□□□ 0.21
HMG20B-211ENST00000486028 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
HMG20B-211ENST00000486028 PTGER2P43116 358 aa16.36■□□□□ 0.21
HMG20B-211ENST00000486028 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
HMG20B-211ENST00000486028 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
HMG20B-211ENST00000486028 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
HMG20B-211ENST00000486028 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
HMG20B-211ENST00000486028 QSER1Q2KHR3 1735 aa16.36■□□□□ 0.21
HMG20B-211ENST00000486028 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
HMG20B-211ENST00000486028 POLD1P28340 1107 aa16.35■□□□□ 0.21
HMG20B-211ENST00000486028 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
HMG20B-211ENST00000486028 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms