RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 IL17REQ8NFR9 667 aa24.3■■□□□ 1.48
ERCC2-205ENST00000485403 SIPA1L3O60292 1781 aaPredicted RBP24.29■■□□□ 1.48
ERCC2-205ENST00000485403 HTATSF1O43719 755 aaKnown RBP24.29■■□□□ 1.48
ERCC2-205ENST00000485403 CABP4P57796 275 aa24.27■■□□□ 1.48
ERCC2-205ENST00000485403 SLC52A2Q9HAB3 445 aa24.27■■□□□ 1.48
ERCC2-205ENST00000485403 TMPOP42166 694 aaKnown RBP24.26■■□□□ 1.47
ERCC2-205ENST00000485403 EZH2Q15910 746 aaKnown RBP24.26■■□□□ 1.47
ERCC2-205ENST00000485403 NFATC2IPQ8NCF5 419 aa24.26■■□□□ 1.47
ERCC2-205ENST00000485403 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
ERCC2-205ENST00000485403 RRP7AQ9Y3A4 280 aaKnown RBP24.25■■□□□ 1.47
ERCC2-205ENST00000485403 NUP188Q5SRE5 1749 aa24.25■■□□□ 1.47
ERCC2-205ENST00000485403 NEUROD2Q15784 382 aa24.25■■□□□ 1.47
ERCC2-205ENST00000485403 PROM2Q8N271 834 aa24.25■■□□□ 1.47
ERCC2-205ENST00000485403 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
ERCC2-205ENST00000485403 PAPPAQ13219 1627 aa24.24■■□□□ 1.47
ERCC2-205ENST00000485403 MCM10Q7L590 875 aa24.23■■□□□ 1.47
ERCC2-205ENST00000485403 PALLDQ8WX93 1383 aa24.23■■□□□ 1.47
ERCC2-205ENST00000485403 RIPK4P57078 832 aa24.22■■□□□ 1.47
ERCC2-205ENST00000485403 TXNRD1Q16881 649 aa24.22■■□□□ 1.47
ERCC2-205ENST00000485403 SMARCC1Q92922 1105 aaPredicted RBP24.22■■□□□ 1.47
ERCC2-205ENST00000485403 ATG3Q9NT62 314 aa24.22■■□□□ 1.47
ERCC2-205ENST00000485403 ASAP1Q9ULH1 1129 aa24.22■■□□□ 1.47
ERCC2-205ENST00000485403 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
ERCC2-205ENST00000485403 TEFQ10587 303 aa24.2■■□□□ 1.47
ERCC2-205ENST00000485403 DCTN1Q14203 1278 aa24.2■■□□□ 1.47
ERCC2-205ENST00000485403 NCBP3Q53F19 620 aaKnown RBP24.2■■□□□ 1.47
ERCC2-205ENST00000485403 ZNF831Q5JPB2 1677 aa24.19■■□□□ 1.46
ERCC2-205ENST00000485403 LMOD3Q0VAK6 560 aa24.19■■□□□ 1.46
ERCC2-205ENST00000485403 SLC27A3Q5K4L6 730 aa24.19■■□□□ 1.46
ERCC2-205ENST00000485403 UBR2Q8IWV8 1755 aa24.18■■□□□ 1.46
ERCC2-205ENST00000485403 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
ERCC2-205ENST00000485403 CCDC27Q2M243 656 aa24.17■■□□□ 1.46
ERCC2-205ENST00000485403 TRIM35Q9UPQ4 493 aa24.17■■□□□ 1.46
ERCC2-205ENST00000485403 LRRC4BQ9NT99 713 aa24.16■■□□□ 1.46
ERCC2-205ENST00000485403 WWC1Q8IX03 1113 aa24.15■■□□□ 1.46
ERCC2-205ENST00000485403 THUMPD2Q9BTF0 503 aaKnown RBP24.15■■□□□ 1.46
ERCC2-205ENST00000485403 ZNF521Q96K83 1311 aa24.15■■□□□ 1.46
ERCC2-205ENST00000485403 CICQ96RK0 1608 aaPredicted RBP24.15■■□□□ 1.46
ERCC2-205ENST00000485403 CCNL1Q9UK58 526 aaPredicted RBP24.15■■□□□ 1.46
ERCC2-205ENST00000485403 KCPQ6ZWJ8 1503 aa24.14■■□□□ 1.46
ERCC2-205ENST00000485403 C5P01031 1676 aa24.14■■□□□ 1.45
ERCC2-205ENST00000485403 LOC102724428A0A0B4J2F2 783 aa24.14■■□□□ 1.45
ERCC2-205ENST00000485403 SIK1P57059 783 aa24.14■■□□□ 1.45
ERCC2-205ENST00000485403 SLC39A6Q13433 755 aa24.13■■□□□ 1.45
ERCC2-205ENST00000485403 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
ERCC2-205ENST00000485403 TAF7Q15545 349 aaPredicted RBP24.12■■□□□ 1.45
ERCC2-205ENST00000485403 ZNF790Q6PG37 636 aa24.11■■□□□ 1.45
ERCC2-205ENST00000485403 SLC4A9Q96Q91 983 aa24.11■■□□□ 1.45
ERCC2-205ENST00000485403 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
ERCC2-205ENST00000485403 KCNQ4P56696 695 aa24.1■■□□□ 1.45
ERCC2-205ENST00000485403 GOLGA2Q08379 1002 aa24.1■■□□□ 1.45
ERCC2-205ENST00000485403 COL5A3P25940 1745 aaPredicted RBP24.1■■□□□ 1.45
ERCC2-205ENST00000485403 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
ERCC2-205ENST00000485403 TJP1Q07157 1748 aa24.09■■□□□ 1.45
ERCC2-205ENST00000485403 PTCD1O75127 700 aaKnown RBP24.09■■□□□ 1.45
ERCC2-205ENST00000485403 TTC5Q8N0Z6 440 aa24.08■■□□□ 1.45
ERCC2-205ENST00000485403 CDCA7LQ96GN5 454 aa24.08■■□□□ 1.45
ERCC2-205ENST00000485403 RBM42Q9BTD8 480 aaKnown RBP24.08■■□□□ 1.45
ERCC2-205ENST00000485403 ANO8Q9HCE9 1232 aaPredicted RBP24.08■■□□□ 1.45
ERCC2-205ENST00000485403 HMGB2P26583 209 aaKnown RBP24.07■■□□□ 1.44
ERCC2-205ENST00000485403 ATP6V1AP38606 617 aa24.07■■□□□ 1.44
ERCC2-205ENST00000485403 ITPK1Q13572 414 aa24.07■■□□□ 1.44
ERCC2-205ENST00000485403 C4BP0C0L5 1744 aa24.06■■□□□ 1.44
ERCC2-205ENST00000485403 KCNQ3O43525 872 aa24.06■■□□□ 1.44
ERCC2-205ENST00000485403 NBPF14Q5TI25 921 aa24.06■■□□□ 1.44
ERCC2-205ENST00000485403 BABAM1Q9NWV8 329 aa24.06■■□□□ 1.44
ERCC2-205ENST00000485403 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
ERCC2-205ENST00000485403 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
ERCC2-205ENST00000485403 MYH14Q7Z406 1995 aaKnown RBP24.05■■□□□ 1.44
ERCC2-205ENST00000485403 AKT1S1Q96B36 256 aa24.05■■□□□ 1.44
ERCC2-205ENST00000485403 MIS18AQ9NYP9 233 aa24.05■■□□□ 1.44
ERCC2-205ENST00000485403 TUBGCP6Q96RT7 1819 aa24.04■■□□□ 1.44
ERCC2-205ENST00000485403 QSER1Q2KHR3 1735 aa24.04■■□□□ 1.44
ERCC2-205ENST00000485403 E9PSI1 815 aa24.04■■□□□ 1.44
ERCC2-205ENST00000485403 CALD1Q05682 793 aaKnown RBP24.04■■□□□ 1.44
ERCC2-205ENST00000485403 SLFN5Q08AF3 891 aa24.04■■□□□ 1.44
ERCC2-205ENST00000485403 LINC00116Q8NCU8 138 aa24.04■■□□□ 1.44
ERCC2-205ENST00000485403 HEG1Q9ULI3 1381 aa24.03■■□□□ 1.44
ERCC2-205ENST00000485403 ZNF827Q17R98 1081 aa24.03■■□□□ 1.44
ERCC2-205ENST00000485403 FMNL2Q96PY5 1086 aa24.03■■□□□ 1.44
ERCC2-205ENST00000485403 CHL1O00533 1208 aa24.02■■□□□ 1.44
ERCC2-205ENST00000485403 SLC15A2Q16348 729 aa24.02■■□□□ 1.44
ERCC2-205ENST00000485403 SPINK5Q9NQ38 1064 aaPredicted RBP24.02■■□□□ 1.44
ERCC2-205ENST00000485403 STK32BQ9NY57 414 aa24.02■■□□□ 1.44
ERCC2-205ENST00000485403 IL16Q14005 1332 aa24.01■■□□□ 1.43
ERCC2-205ENST00000485403 UBR3Q6ZT12 1888 aa24.01■■□□□ 1.43
ERCC2-205ENST00000485403 ZNF853P0CG23 659 aa24■■□□□ 1.43
ERCC2-205ENST00000485403 CFAP44Q96MT7 982 aa24■■□□□ 1.43
ERCC2-205ENST00000485403 TSPYL4Q9UJ04 414 aa24■■□□□ 1.43
ERCC2-205ENST00000485403 DNAJC10Q8IXB1 793 aa24■■□□□ 1.43
ERCC2-205ENST00000485403 EIF4A1P60842 406 aaKnown RBP23.99■■□□□ 1.43
ERCC2-205ENST00000485403 R3HDM1Q15032 1099 aaKnown RBP23.99■■□□□ 1.43
ERCC2-205ENST00000485403 IFT57Q9NWB7 429 aa23.99■■□□□ 1.43
ERCC2-205ENST00000485403 CNTNAP4Q9C0A0 1308 aa23.98■■□□□ 1.43
ERCC2-205ENST00000485403 TRMT2AQ8IZ69 625 aaKnown RBP23.98■■□□□ 1.43
ERCC2-205ENST00000485403 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
ERCC2-205ENST00000485403 RC3H1Q5TC82 1133 aaKnown RBP23.97■■□□□ 1.43
ERCC2-205ENST00000485403 DUSP27Q5VZP5 1158 aa23.97■■□□□ 1.43
ERCC2-205ENST00000485403 LAS1LQ9Y4W2 734 aaKnown RBP23.97■■□□□ 1.43
ERCC2-205ENST00000485403 LAMB4A4D0S4 1761 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms