RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 GCP02774 474 aa17.71■□□□□ 0.43
ABCD4-212ENST00000484380 HOXB7P09629 217 aa17.71■□□□□ 0.43
ABCD4-212ENST00000484380 FLIIQ13045 1269 aa17.71■□□□□ 0.43
ABCD4-212ENST00000484380 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-212ENST00000484380 HMMRO75330 724 aa17.7■□□□□ 0.42
ABCD4-212ENST00000484380 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
ABCD4-212ENST00000484380 STRCP1A6NGW2 1772 aa17.7■□□□□ 0.42
ABCD4-212ENST00000484380 ABCC6O95255 1503 aa17.7■□□□□ 0.42
ABCD4-212ENST00000484380 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-212ENST00000484380 ANTXR1Q9H6X2 564 aa17.7■□□□□ 0.42
ABCD4-212ENST00000484380 C19orf44Q9H6X5 657 aa17.7■□□□□ 0.42
ABCD4-212ENST00000484380 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
ABCD4-212ENST00000484380 AMOTQ4VCS5 1084 aa17.68■□□□□ 0.42
ABCD4-212ENST00000484380 CHMP4AQ9BY43 222 aa17.68■□□□□ 0.42
ABCD4-212ENST00000484380 F6X3S4 739 aa17.68■□□□□ 0.42
ABCD4-212ENST00000484380 CDC45O75419 566 aa17.68■□□□□ 0.42
ABCD4-212ENST00000484380 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
ABCD4-212ENST00000484380 TBC1D9Q6ZT07 1266 aa17.68■□□□□ 0.42
ABCD4-212ENST00000484380 RGPD5Q99666 1765 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 PXDNQ92626 1479 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 STRCQ7RTU9 1775 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 GNAI3P08754 354 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 GSPT1P15170 499 aaKnown RBP17.67■□□□□ 0.42
ABCD4-212ENST00000484380 TTC22Q5TAA0 569 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 KRT28Q7Z3Y7 464 aa17.67■□□□□ 0.42
ABCD4-212ENST00000484380 GNAI2P04899 355 aa17.66■□□□□ 0.42
ABCD4-212ENST00000484380 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
ABCD4-212ENST00000484380 SLC4A10Q6U841 1118 aa17.66■□□□□ 0.42
ABCD4-212ENST00000484380 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
ABCD4-212ENST00000484380 EIF4A1P60842 406 aaKnown RBP17.65■□□□□ 0.42
ABCD4-212ENST00000484380 SNX21Q969T3 373 aa17.65■□□□□ 0.42
ABCD4-212ENST00000484380 PLEKHG2Q9H7P9 1386 aa17.65■□□□□ 0.42
ABCD4-212ENST00000484380 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
ABCD4-212ENST00000484380 LRRC59Q96AG4 307 aaKnown RBP17.65■□□□□ 0.42
ABCD4-212ENST00000484380 COL18A1P39060 1754 aa17.64■□□□□ 0.42
ABCD4-212ENST00000484380 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
ABCD4-212ENST00000484380 ANKRD24Q8TF21 1146 aa17.64■□□□□ 0.41
ABCD4-212ENST00000484380 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
ABCD4-212ENST00000484380 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
ABCD4-212ENST00000484380 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
ABCD4-212ENST00000484380 TMEM94Q12767 1356 aa17.62■□□□□ 0.41
ABCD4-212ENST00000484380 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
ABCD4-212ENST00000484380 ERBB3P21860 1342 aa17.61■□□□□ 0.41
ABCD4-212ENST00000484380 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
ABCD4-212ENST00000484380 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
ABCD4-212ENST00000484380 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
ABCD4-212ENST00000484380 HEG1Q9ULI3 1381 aa17.61■□□□□ 0.41
ABCD4-212ENST00000484380 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
ABCD4-212ENST00000484380 TEFQ10587 303 aa17.61■□□□□ 0.41
ABCD4-212ENST00000484380 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
ABCD4-212ENST00000484380 SCN11AQ9UI33 1791 aa17.6■□□□□ 0.41
ABCD4-212ENST00000484380 ATP8B2P98198 1209 aa17.6■□□□□ 0.41
ABCD4-212ENST00000484380 C1orf141Q5JVX7 400 aa17.6■□□□□ 0.41
ABCD4-212ENST00000484380 C16orf71Q8IYS4 520 aaPredicted RBP17.6■□□□□ 0.41
ABCD4-212ENST00000484380 KIF2CQ99661 725 aa17.6■□□□□ 0.41
ABCD4-212ENST00000484380 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
ABCD4-212ENST00000484380 SALL3Q9BXA9 1300 aa17.59■□□□□ 0.41
ABCD4-212ENST00000484380 BTBD11A6QL63 1104 aa17.58■□□□□ 0.41
ABCD4-212ENST00000484380 ATF3P18847 181 aa17.58■□□□□ 0.41
ABCD4-212ENST00000484380 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.41
ABCD4-212ENST00000484380 NECTIN2Q92692 538 aa17.58■□□□□ 0.41
ABCD4-212ENST00000484380 AXIN2Q9Y2T1 843 aa17.58■□□□□ 0.41
ABCD4-212ENST00000484380 TNS3Q68CZ2 1445 aa17.58■□□□□ 0.41
ABCD4-212ENST00000484380 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
ABCD4-212ENST00000484380 PKD1L3Q7Z443 1732 aa17.57■□□□□ 0.4
ABCD4-212ENST00000484380 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
ABCD4-212ENST00000484380 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
ABCD4-212ENST00000484380 USP44Q9H0E7 712 aa17.57■□□□□ 0.4
ABCD4-212ENST00000484380 MPRIPQ6WCQ1 1025 aa17.56■□□□□ 0.4
ABCD4-212ENST00000484380 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
ABCD4-212ENST00000484380 SDSP20132 328 aa17.56■□□□□ 0.4
ABCD4-212ENST00000484380 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
ABCD4-212ENST00000484380 CHMP5Q9NZZ3 219 aa17.56■□□□□ 0.4
ABCD4-212ENST00000484380 NPHP3Q7Z494 1330 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
ABCD4-212ENST00000484380 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
ABCD4-212ENST00000484380 GSE1Q14687 1217 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 LRRCC1Q9C099 1032 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 CHPF2Q9P2E5 772 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 LRRFIP2Q9Y608 721 aaKnown RBP17.55■□□□□ 0.4
ABCD4-212ENST00000484380 MRC1P22897 1456 aa17.55■□□□□ 0.4
ABCD4-212ENST00000484380 KCNQ3O43525 872 aa17.54■□□□□ 0.4
ABCD4-212ENST00000484380 DDIT3P35638 169 aa17.54■□□□□ 0.4
ABCD4-212ENST00000484380 PDE1AP54750 535 aa17.54■□□□□ 0.4
ABCD4-212ENST00000484380 SSH3Q8TE77 659 aa17.54■□□□□ 0.4
ABCD4-212ENST00000484380 ADCY9O60503 1353 aa17.54■□□□□ 0.4
ABCD4-212ENST00000484380 PARP4Q9UKK3 1724 aaKnown RBP17.54■□□□□ 0.4
ABCD4-212ENST00000484380 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
ABCD4-212ENST00000484380 AOX1Q06278 1338 aa17.53■□□□□ 0.4
ABCD4-212ENST00000484380 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
ABCD4-212ENST00000484380 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
ABCD4-212ENST00000484380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
ABCD4-212ENST00000484380 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
ABCD4-212ENST00000484380 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
ABCD4-212ENST00000484380 CPDO75976 1380 aa17.52■□□□□ 0.4
ABCD4-212ENST00000484380 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms