RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 MTMR14Q8NCE2 650 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 C1orf131Q8NDD1 294 aaKnown RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 C8orf48Q96LL4 319 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 INO80BQ9C086 356 aaPredicted RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 RSPH9Q9H1X1 276 aaPredicted RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 PIF1Q9H611 641 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 GOLGA6AQ9NYA3 693 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 MAP3K20Q9NYL2 800 aaKnown RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 BIN2Q9UBW5 565 aaPredicted RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 PRR12Q9ULL5 1215 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 NUTM2FA1L443 756 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 C11orf95C9JLR9 678 aaPredicted RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 PPP1R12AO14974 1030 aaPredicted RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 LZTS3O60299 673 aaPredicted RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 DNAJC6O75061 913 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 EVA1CP58658 441 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 UBE4AQ14139 1066 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 DHX8Q14562 1220 aaKnown RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 BMS1Q14692 1282 aaKnown RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 MAPRE1Q15691 268 aaKnown RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 FAM161AQ3B820 660 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 PUS10Q3MIT2 529 aaKnown RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 L1TD1Q5T7N2 865 aaKnown RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 DDX46Q7L014 1031 aaKnown RBP4.41□□□□□ -1.7
FXN-204ENST00000484259 FBXO33Q7Z6M2 555 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 NT5DC4Q86YG4 428 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 PMFBP1Q8TBY8 1022 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 RELTQ969Z4 430 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 IL17RAQ96F46 866 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 FRMD6Q96NE9 622 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 SFMBT1Q9UHJ3 866 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 TBC1D2BQ9UPU7 963 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 PCDHGA10Q9Y5H3 936 aa4.41□□□□□ -1.7
FXN-204ENST00000484259 TRIM6-TRIM34B2RNG4 842 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 PLIN1O60240 522 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 GIGYF1O75420 1035 aaPredicted RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 COL6A1P12109 1028 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 CLCN1P35523 988 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 RAD51AP2Q09MP3 1159 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 ELOAQ14241 798 aaKnown RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 COL19A1Q14993 1142 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 VPS72Q15906 364 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 NBPF9Q3BBW0 867 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 CDCA8Q53HL2 280 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 EFCAB2Q5VUJ9 269 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 C9orf131Q5VYM1 1079 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 ZNF598Q86UK7 904 aaKnown RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 DRC7Q8IY82 874 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 NKX2-3Q8TAU0 364 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 ADAMTS19Q8TE59 1207 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 GMLQ99445 158 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 TINF2Q9BSI4 451 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 REPIN1Q9BWE0 567 aaKnown RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 CASS4Q9NQ75 786 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 TYW1Q9NV66 732 aaKnown RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 TFIP11Q9UBB9 837 aaKnown RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 IQSEC3Q9UPP2 1182 aaPredicted RBP4.4□□□□□ -1.71
FXN-204ENST00000484259 PRKAB1Q9Y478 270 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 IGF1RP08069 1367 aa4.4□□□□□ -1.71
FXN-204ENST00000484259 CBFA2T2O43439 604 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 FCHSD2O94868 740 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 FGAP02671 866 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 HSP90AB1P08238 724 aaKnown RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 VIL1P09327 827 aaKnown RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 PDGFRBP09619 1106 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 FAM200BP0CF97 657 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 SSTR3P32745 418 aaPredicted RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 GJC2Q5T442 439 aaPredicted RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 SPRYD7Q5W111 196 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 PPP2R2DQ66LE6 453 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 PHLDB3Q6NSJ2 640 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 TYW1BQ6NUM6 668 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 RPUSD2Q8IZ73 545 aaKnown RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 PAF1Q8N7H5 531 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 PRPF38AQ8NAV1 312 aaKnown RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 JDP2Q8WYK2 163 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 RUNDC1Q96C34 613 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 CDC5LQ99459 802 aaKnown RBP4.39□□□□□ -1.71
FXN-204ENST00000484259 TGIF2Q9GZN2 237 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 OSBPL2Q9H1P3 480 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 ZHX3Q9H4I2 956 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 IFT122Q9HBG6 1241 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 CAPN10Q9HC96 672 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 SH3BP1Q9Y3L3 701 aa4.39□□□□□ -1.71
FXN-204ENST00000484259 TNFRSF10AO00220 468 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 IFRD1O00458 451 aaPredicted RBP4.38□□□□□ -1.71
FXN-204ENST00000484259 TCERG1O14776 1098 aaKnown RBP4.38□□□□□ -1.71
FXN-204ENST00000484259 KIF3BO15066 747 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 TIMM44O43615 452 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 GTF2E1P29083 439 aaPredicted RBP4.38□□□□□ -1.71
FXN-204ENST00000484259 ITGAEP38570 1179 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 CLK2P49760 499 aaKnown RBP4.38□□□□□ -1.71
FXN-204ENST00000484259 TAGLNQ01995 201 aaKnown RBP4.38□□□□□ -1.71
FXN-204ENST00000484259 RASSF7Q02833 373 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 NFE2L2Q16236 605 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 PPP1R15BQ5SWA1 713 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 JAZF1Q86VZ6 243 aa4.38□□□□□ -1.71
FXN-204ENST00000484259 ZNF512BQ96KM6 892 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms