RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
PCCB-216ENST00000483687 BABAM1Q9NWV8 329 aa24.63■■□□□ 1.53
PCCB-216ENST00000483687 CABP4P57796 275 aa24.62■■□□□ 1.53
PCCB-216ENST00000483687 RBM6P78332 1123 aaKnown RBP24.62■■□□□ 1.53
PCCB-216ENST00000483687 NFATC2IPQ8NCF5 419 aa24.62■■□□□ 1.53
PCCB-216ENST00000483687 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
PCCB-216ENST00000483687 ERVV-2B6SEH9 535 aa24.61■■□□□ 1.53
PCCB-216ENST00000483687 EXOSC9Q06265 439 aaKnown RBP24.61■■□□□ 1.53
PCCB-216ENST00000483687 SEPT12Q8IYM1 358 aa24.61■■□□□ 1.53
PCCB-216ENST00000483687 KDM3BQ7LBC6 1761 aa24.61■■□□□ 1.53
PCCB-216ENST00000483687 ITGB4P16144 1822 aa24.58■■□□□ 1.53
PCCB-216ENST00000483687 DOT1LQ8TEK3 1739 aa24.58■■□□□ 1.53
PCCB-216ENST00000483687 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
PCCB-216ENST00000483687 RXRBP28702 533 aa24.55■■□□□ 1.52
PCCB-216ENST00000483687 TMOD3Q9NYL9 352 aa24.55■■□□□ 1.52
PCCB-216ENST00000483687 RCAN3Q9UKA8 241 aa24.55■■□□□ 1.52
PCCB-216ENST00000483687 CT47B1P0C2W7 299 aaPredicted RBP24.54■■□□□ 1.52
PCCB-216ENST00000483687 C8orf58Q8NAV2 365 aa24.54■■□□□ 1.52
PCCB-216ENST00000483687 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
PCCB-216ENST00000483687 ELL2O00472 640 aaPredicted RBP24.53■■□□□ 1.52
PCCB-216ENST00000483687 SYTL4Q96C24 671 aaPredicted RBP24.53■■□□□ 1.52
PCCB-216ENST00000483687 KCNQ3O43525 872 aa24.52■■□□□ 1.52
PCCB-216ENST00000483687 SLC39A6Q13433 755 aa24.52■■□□□ 1.52
PCCB-216ENST00000483687 KRT24Q2M2I5 525 aa24.52■■□□□ 1.52
PCCB-216ENST00000483687 ZNF790Q6PG37 636 aa24.52■■□□□ 1.52
PCCB-216ENST00000483687 TSPYL6Q8N831 410 aa24.52■■□□□ 1.52
PCCB-216ENST00000483687 TWISTNBQ3B726 338 aaPredicted RBP24.52■■□□□ 1.52
PCCB-216ENST00000483687 POTEAQ6S8J7 498 aa24.52■■□□□ 1.52
PCCB-216ENST00000483687 PRIM1P49642 420 aaKnown RBP24.51■■□□□ 1.51
PCCB-216ENST00000483687 EIF4A1P60842 406 aaKnown RBP24.51■■□□□ 1.51
PCCB-216ENST00000483687 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
PCCB-216ENST00000483687 ACSBG1Q96GR2 724 aa24.51■■□□□ 1.51
PCCB-216ENST00000483687 PIGBQ92521 554 aa24.5■■□□□ 1.51
PCCB-216ENST00000483687 BCL9O00512 1426 aa24.5■■□□□ 1.51
PCCB-216ENST00000483687 FAM182BQ5T319 152 aa24.49■■□□□ 1.51
PCCB-216ENST00000483687 PAPPAQ13219 1627 aa24.49■■□□□ 1.51
PCCB-216ENST00000483687 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
PCCB-216ENST00000483687 VAMP4O75379 141 aa24.48■■□□□ 1.51
PCCB-216ENST00000483687 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
PCCB-216ENST00000483687 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
PCCB-216ENST00000483687 UBR2Q8IWV8 1755 aa24.46■■□□□ 1.51
PCCB-216ENST00000483687 ZNF428Q96B54 188 aa24.46■■□□□ 1.51
PCCB-216ENST00000483687 RGS12O14924 1447 aa24.46■■□□□ 1.51
PCCB-216ENST00000483687 ZNF496Q96IT1 587 aaPredicted RBP24.44■■□□□ 1.5
PCCB-216ENST00000483687 SBF2Q86WG5 1849 aa24.44■■□□□ 1.5
PCCB-216ENST00000483687 SOS1Q07889 1333 aaPredicted RBP24.44■■□□□ 1.5
PCCB-216ENST00000483687 KCNQ2O43526 872 aa24.44■■□□□ 1.5
PCCB-216ENST00000483687 FMNL2Q96PY5 1086 aa24.44■■□□□ 1.5
PCCB-216ENST00000483687 ASAP1Q9ULH1 1129 aa24.44■■□□□ 1.5
PCCB-216ENST00000483687 NHSQ6T4R5 1651 aa24.43■■□□□ 1.5
PCCB-216ENST00000483687 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
PCCB-216ENST00000483687 HEG1Q9ULI3 1381 aa24.43■■□□□ 1.5
PCCB-216ENST00000483687 EP400Q96L91 3159 aa24.42■■□□□ 1.5
PCCB-216ENST00000483687 BCAR3O75815 825 aa24.42■■□□□ 1.5
PCCB-216ENST00000483687 ATG3Q9NT62 314 aa24.42■■□□□ 1.5
PCCB-216ENST00000483687 KCPQ6ZWJ8 1503 aa24.42■■□□□ 1.5
PCCB-216ENST00000483687 GIGYF1O75420 1035 aaPredicted RBP24.41■■□□□ 1.5
PCCB-216ENST00000483687 HOXB7P09629 217 aa24.41■■□□□ 1.5
PCCB-216ENST00000483687 ALDH1L2Q3SY69 923 aa24.41■■□□□ 1.5
PCCB-216ENST00000483687 SSH1Q8WYL5 1049 aa24.41■■□□□ 1.5
PCCB-216ENST00000483687 SMC4Q9NTJ3 1288 aa24.41■■□□□ 1.5
PCCB-216ENST00000483687 PTCD1O75127 700 aaKnown RBP24.4■■□□□ 1.5
PCCB-216ENST00000483687 FAM196AQ6ZSG2 479 aa24.4■■□□□ 1.5
PCCB-216ENST00000483687 C5P01031 1676 aa24.4■■□□□ 1.5
PCCB-216ENST00000483687 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
PCCB-216ENST00000483687 SNRPA1P09661 255 aaKnown RBP24.38■■□□□ 1.49
PCCB-216ENST00000483687 BTAF1O14981 1849 aa24.38■■□□□ 1.49
PCCB-216ENST00000483687 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
PCCB-216ENST00000483687 EIF2S2P20042 333 aaKnown RBP24.38■■□□□ 1.49
PCCB-216ENST00000483687 HDGFL1Q5TGJ6 251 aa24.38■■□□□ 1.49
PCCB-216ENST00000483687 RRP1P56182 461 aaKnown RBP24.37■■□□□ 1.49
PCCB-216ENST00000483687 CCDC30Q5VVM6 783 aa24.37■■□□□ 1.49
PCCB-216ENST00000483687 NECTIN2Q92692 538 aa24.37■■□□□ 1.49
PCCB-216ENST00000483687 RNF123Q5XPI4 1314 aa24.37■■□□□ 1.49
PCCB-216ENST00000483687 RBM42Q9BTD8 480 aaKnown RBP24.36■■□□□ 1.49
PCCB-216ENST00000483687 CHMP4AQ9BY43 222 aa24.36■■□□□ 1.49
PCCB-216ENST00000483687 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
PCCB-216ENST00000483687 CACNA1FO60840 1977 aa24.35■■□□□ 1.49
PCCB-216ENST00000483687 LAMB4A4D0S4 1761 aa24.35■■□□□ 1.49
PCCB-216ENST00000483687 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
PCCB-216ENST00000483687 STK31Q9BXU1 1019 aa24.35■■□□□ 1.49
PCCB-216ENST00000483687 PLIN1O60240 522 aa24.34■■□□□ 1.49
PCCB-216ENST00000483687 FRAT1Q92837 279 aaPredicted RBP24.34■■□□□ 1.49
PCCB-216ENST00000483687 SMARCC1Q92922 1105 aaPredicted RBP24.34■■□□□ 1.49
PCCB-216ENST00000483687 PALLDQ8WX93 1383 aa24.34■■□□□ 1.49
PCCB-216ENST00000483687 CANXP27824 592 aaKnown RBP24.33■■□□□ 1.49
PCCB-216ENST00000483687 MRPL50Q8N5N7 158 aaKnown RBP24.33■■□□□ 1.49
PCCB-216ENST00000483687 BRPF1P55201 1214 aaPredicted RBP24.32■■□□□ 1.48
PCCB-216ENST00000483687 VSIG10Q8N0Z9 540 aa24.32■■□□□ 1.48
PCCB-216ENST00000483687 BCL11BQ9C0K0 894 aaPredicted RBP24.32■■□□□ 1.48
PCCB-216ENST00000483687 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
PCCB-216ENST00000483687 USP16Q9Y5T5 823 aa24.32■■□□□ 1.48
PCCB-216ENST00000483687 SLC4A2P04920 1241 aa24.31■■□□□ 1.48
PCCB-216ENST00000483687 TRIM37O94972 964 aa24.3■■□□□ 1.48
PCCB-216ENST00000483687 CHPF2Q9P2E5 772 aa24.3■■□□□ 1.48
PCCB-216ENST00000483687 NOB1Q9ULX3 412 aaKnown RBP24.3■■□□□ 1.48
PCCB-216ENST00000483687 NEFLP07196 543 aa24.29■■□□□ 1.48
PCCB-216ENST00000483687 SLC4A9Q96Q91 983 aa24.29■■□□□ 1.48
PCCB-216ENST00000483687 LOC102724428A0A0B4J2F2 783 aa24.28■■□□□ 1.48
PCCB-216ENST00000483687 SIK1P57059 783 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms